def setUpClass(cls):
cls.sample_id = 'AF-72'
cls.analysis_id = 0
p1 = '../data/autoupdate_AF_72_7.875.txt'
p1 = '../data/autoupdate_AF_72_7.875.25.txt'
p2 = '../data/autoupdate_AF_72_8.03b.txt'
cls.parsers = {}
for k, p in (('7.875', p1), ('8.03b', p2)):
pa = AutoupdateParser()
pa.parse(p)
cls.parsers[k] = pa
def setUpClass(cls):
# cls.isotope_man = isotope_manager_factory(name='pychrondata_minnabluff')
#cls.isotope_man.db.connect()
man = ISOTOPE_MANAGER
db = man.db
# cls.sample_id = 'AF-146'
# sid = 'MB06-826a'
#
# with db.session_ctx():
# ans, tc = db.get_sample_analyses([sid, ], ['Minna Bluff'])
#
# ai = next((a for a in ans if a.aliquot==2), None)
# an = man.make_analysis(ai, unpack=False, calculate_age=True)
# cls.analysis = an
cls.sample_id = 'AF-72'
sid = 'MB06-674'
with db.session_ctx():
ans, tc = db.get_sample_analyses([sid, ], ['Minna Bluff'])
an = man.make_analysis(ans[cls.analysis_id], unpack=True, calculate_age=True)
# ai = next((a for a in ans if a.aliquot==2), None)
# an = man.make_analysis(ai, unpack=False, calculate_age=True)
cls.analysis = an
p = '../data/autoupdate_AF_72_1.txt'
p = '../data/autoupdate_AF_72_7.875.25.txt'
# p = '../data/autoupdate_AF_72_7.875.txt'
# p = '../data/autoupdate_AF_72_8.03b.txt'
# p = '../data/autoupdate_AF_146_7.875.txt'
cls.parser = AutoupdateParser()
cls.parser.parse(p)
def setUpClass(cls):
cls.isotope_man = isotope_manager_factory(
name='pychrondata_minnabluff')
cls.isotope_man.db.connect()
man = cls.isotope_man
db = man.db
cls.sample_id = sid = 'AF-72'
cls.analysis_id = aid = string.ascii_uppercase.index('A')
with db.session_ctx():
ans, tc = db.get_sample_analyses([
sid,
], ['Minna Bluff'])
an = man.make_analysis(ans[aid])
cls.analysis = an
p = '../data/autoupdate_AF_72_1'
cls.parser = AutoupdateParser()
cls.parser.parse(p)
import math
import os
from pychron.core.ui import set_toolkit
set_toolkit('qt4')
from pychron.processing.autoupdate_parser import AutoupdateParser
from test.database import isotope_manager_factory
isotope_man=isotope_manager_factory(name='pychron_dataset')
isotope_man.db.connect(test=True)
pp = os.path.join(os.path.dirname(os.path.dirname(__file__)), 'data', 'massspec_dataset_nofilter')
# pp = '../data/massspec_dataset_nofilter'
parser = AutoupdateParser()
parser.parse(pp)
msid='Unknown'
sid='MB06-507'
pid='Minna Bluff'
class IntensityMixin(object):
@classmethod
def setUpClass(cls):
aid=cls.analysis_id
cls.sample_id = msid
cls.analysis_id = aid
db=isotope_man.db
with db.session_ctx():
ans, tc = db.get_sample_analyses([sid, ], [pid])
import os
from pychron.core.ui import set_toolkit
set_toolkit('qt4')
from pychron.processing.autoupdate_parser import AutoupdateParser
from test.database import isotope_manager_factory
isotope_man = isotope_manager_factory(name='pychron_dataset')
isotope_man.db.connect(test=True)
pp = os.path.join(os.path.dirname(os.path.dirname(__file__)), 'data',
'massspec_dataset_nofilter')
# pp = '../data/massspec_dataset_nofilter'
parser = AutoupdateParser()
parser.parse(pp)
msid = 'Unknown'
sid = 'MB06-507'
pid = 'Minna Bluff'
class IntensityMixin(object):
@classmethod
def setUpClass(cls):
aid = cls.analysis_id
cls.sample_id = msid
cls.analysis_id = aid
db = isotope_man.db
with db.session_ctx():
def setUpClass(cls):
p = '../data/autoupdate_AF_72'
cls._path = p
cls.parser = AutoupdateParser()