def test_pass_meta_ins():
"""
Test pass_meta_ins functionality
"""
base_dir = str(Path(__file__).parent / "examples")
dir_path = base_dir + '/002/dmri'
conn_model = 'corr'
est_path = dir_path + '/DesikanKlein2012/0021001_Default_est_csd_0.09dens_100000samples_particle_track.npy'
network = 'Default'
thr = 0.5
prune = True
ID = '002'
roi = dir_path + 'pDMN_3_bin_mask.nii.gz'
norm = 10
binary = True
[
conn_model_iterlist, est_path_iterlist, network_iterlist, thr_iterlist,
prune_iterlist, ID_iterlist, roi_iterlist, norm_iterlist,
binary_iterlist
] = utils.pass_meta_ins(conn_model, est_path, network, thr, prune, ID, roi,
norm, binary)
assert conn_model_iterlist is not None
assert est_path_iterlist is not None
assert network_iterlist is not None
assert thr_iterlist is not None
assert prune_iterlist is not None
assert ID_iterlist is not None
assert roi_iterlist is not None
assert norm_iterlist is not None
assert binary_iterlist is not None
def test_pass_meta_ins():
"""
Test pass_meta_ins functionality
"""
import tempfile
dir_path = str(tempfile.TemporaryDirectory().name)
os.makedirs(dir_path)
base_dir = str(Path(__file__).parent / "examples")
conn_model = 'corr'
est_path = f"{base_dir}/miscellaneous/0021001_modality-dwi_rsn-Default_est-tensor_nodetype-parc_samples-100000streams_tt-particle_dg-prob_ml-10_thrtype-DENS_thr-0.09.npy"
network = 'Default'
thr = 0.09
prune = True
ID = '0021001'
roi = f"{base_dir}/miscellaneous/pDMN_3_bin.nii.gz"
norm = 10
binary = True
[
conn_model_iterlist, est_path_iterlist, network_iterlist, thr_iterlist,
prune_iterlist, ID_iterlist, roi_iterlist, norm_iterlist,
binary_iterlist
] = utils.pass_meta_ins(conn_model, est_path, network, thr, prune, ID, roi,
norm, binary)
assert conn_model_iterlist is not None
assert est_path_iterlist is not None
assert network_iterlist is not None
assert thr_iterlist is not None
assert prune_iterlist is not None
assert ID_iterlist is not None
assert roi_iterlist is not None
assert norm_iterlist is not None
assert binary_iterlist is not None
def test_pass_meta_ins(gen_mat_data, random_mni_roi_data):
"""
Test pass_meta_ins functionality
"""
import tempfile
tmp = tempfile.TemporaryDirectory()
dir_path = str(tmp.name)
os.makedirs(dir_path, exist_ok=True)
conn_model = 'corr'
est_path = gen_mat_data()['mat_file_list'][0]
subnet = 'Default'
thr = 0.09
prune = True
ID = 'sub-0021001'
roi = random_mni_roi_data['roi_file']
norm = 10
binary = True
[
conn_model_iterlist, est_path_iterlist, subnet_iterlist, thr_iterlist,
prune_iterlist, ID_iterlist, roi_iterlist, norm_iterlist,
binary_iterlist
] = utils.pass_meta_ins(conn_model, est_path, subnet, thr, prune, ID, roi,
norm, binary)
assert conn_model_iterlist is not None
assert est_path_iterlist is not None
assert subnet_iterlist is not None
assert thr_iterlist is not None
assert prune_iterlist is not None
assert ID_iterlist is not None
assert roi_iterlist is not None
assert norm_iterlist is not None
assert binary_iterlist is not None
tmp.cleanup()
