def test_read_markers(
usecols,
shape_val,
first_last_val,
mean_val,
median_val,
sum_val,
nans_val,
extension,
):
if extension == "csv":
data = Markers.from_csv(**markers_csv_kwargs, usecols=usecols)
decimal = 0
elif extension == "c3d":
data = Markers.from_c3d(MARKERS_ANALOGS_C3D,
prefix_delimiter=":",
usecols=usecols)
decimal = 4
else:
raise ValueError("wrong extension provided")
if usecols and isinstance(usecols[0], str):
np.testing.assert_array_equal(x=data.channel, y=usecols)
is_expected_array(
data,
shape_val,
first_last_val,
mean_val,
median_val,
sum_val,
nans_val,
decimal=decimal,
)
def test_csv_without_header():
is_expected_array(
Analogs.from_csv(ANALOGS_CSV, first_row=5, first_column=2),
**EXPECTED_VALUES[59],
)
is_expected_array(
Markers.from_csv(MARKERS_CSV_WITHOUT_HEADER, first_column=2),
**EXPECTED_VALUES[58],
)
def test_read_catch_error(
usecols,
extension,
):
with pytest.raises(IndexError):
Markers.from_csv(MARKERS_CSV)
if extension == "csv":
with pytest.raises(ValueError):
Analogs.from_csv(**analogs_csv_kwargs, usecols=usecols)
with pytest.raises(ValueError):
Markers.from_csv(**markers_csv_kwargs, usecols=usecols)
elif extension == "c3d":
with pytest.raises(ValueError):
Analogs.from_c3d(MARKERS_ANALOGS_C3D, usecols=usecols)
reader = getattr(Markers, f"from_{extension}")
with pytest.raises(ValueError):
reader(MARKERS_ANALOGS_C3D, usecols=usecols)