def test_encodeNP_SLOF(self):
"""
String out;
MSNumpressCoder::NumpressConfig config;
config.np_compression = MSNumpressCoder::SLOF;
config.estimate_fixed_point = true; // critical
bool zlib_compression = false;
MSNumpressCoder().encodeNP(in, out, zlib_compression, config);
TEST_EQUAL(out.size(), 24)
TEST_EQUAL(out, "QMVagAAAAAAZxX3ivPP8/w==")
"""
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.SLOF
config.estimate_fixed_point = True
out_ = pyopenms.String()
coder.encodeNP(self.testData, out_, False, config)
out = out_.c_str()
self.assertEqual(len(out), 24)
self.assertEqual(out, "QMVagAAAAAAZxX3ivPP8/w==")
def test_encodeNP_LINEAR(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.LINEAR
config.estimate_fixed_point = True
out_ = pyopenms.String()
coder.encodeNP(self.testData, out_, False, config)
out = out_.c_str()
self.assertEqual(len(out), 28)
self.assertEqual(out, "QWR64UAAAADo//8/0P//f1kSgA==")
def test_encodeNP_PIC(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.PIC
config.estimate_fixed_point = True
out_ = pyopenms.String()
coder.encodeNP(self.testData, out_, False, config)
out = out_.c_str()
self.assertEqual(len(out), 12)
self.assertEqual(out, "ZGaMXCFQkQ==")
def test_encodeNP_PIC(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.PIC
config.estimate_fixed_point = True
out_ = pyopenms.String()
coder.encodeNPRaw(self.testData, out_, config)
out = out_.c_str()
self.assertEqual(len(out), 7)
self.assertEqual(out, b'df\x8c\\!P\x91')
def test_decodeNP_LINEAR(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.LINEAR
config.estimate_fixed_point = True
inData = "QWR64UAAAADo//8/0P//f1kSgA=="
out = []
coder.decodeNP(inData, out, False, config)
self.assertEqual(len(out), 4)
for a, b in zip(self.testData, out):
self.assertAlmostEqual(a, b, places=7)
def test_decodeNP_PIC(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.PIC
config.estimate_fixed_point = True
inData = "ZGaMXCFQkQ=="
out = []
coder.decodeNP(inData, out, False, config)
self.assertEqual(len(out), 4)
for a, b in zip(self.testData, out):
self.assertAlmostEqual(a, b, places=2)
def test_decodeNP_SLOF(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.SLOF
config.estimate_fixed_point = True
inData = "QMVagAAAAAAZxX3ivPP8/w=="
out = []
coder.decodeNP(inData, out, False, config)
self.assertEqual(len(out), 4)
for a, b in zip(self.testData, out):
self.assertAlmostEqual(a, b, places=2)
def test_decodeNP_LINEAR(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.LINEAR
config.estimate_fixed_point = True
inData = b'Adz\xe1@\x00\x00\x00\xe8\xff\xff?\xd0\xff\xff\x7fY\x12\x80'
out = []
coder.decodeNPRaw(inData, out, config)
self.assertEqual(len(out), 4)
for a, b in zip(self.testData, out):
self.assertAlmostEqual(a, b, places=7)
def test_encodeNP_LINEAR(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.LINEAR
config.estimate_fixed_point = True
out_ = pyopenms.String()
coder.encodeNPRaw(self.testData, out_, config)
out = out_.c_str()
self.assertEqual(len(out), 19)
self.assertEqual(
out, b'Adz\xe1@\x00\x00\x00\xe8\xff\xff?\xd0\xff\xff\x7fY\x12\x80')
def test_decodeNP_PIC(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.PIC
config.estimate_fixed_point = True
inData = b'df\x8c\\!P\x91'
out = []
coder.decodeNPRaw(inData, out, config)
self.assertEqual(len(out), 4)
for a, b in zip(self.testData, out):
self.assertAlmostEqual(a, b, places=2)
def test_decodeNP_SLOF(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.SLOF
config.estimate_fixed_point = True
inData = b'@\xc5Z\x80\x00\x00\x00\x00\x19\xc5}\xe2\xbc\xf3\xfc\xff'
out = []
coder.decodeNPRaw(inData, out, config)
self.assertEqual(len(out), 4)
for a, b in zip(self.testData, out):
self.assertAlmostEqual(a, b, places=2)
def test_encodeNP_SLOF(self):
coder = pyopenms.MSNumpressCoder()
config = pyopenms.NumpressConfig()
config.np_compression = pyopenms.MSNumpressCoder.NumpressCompression.SLOF
config.estimate_fixed_point = True
out_ = pyopenms.String()
coder.encodeNPRaw(self.testData, out_, config)
out = out_.c_str()
self.assertEqual(len(out), 16)
self.assertEqual(
out, b'@\xc5Z\x80\x00\x00\x00\x00\x19\xc5}\xe2\xbc\xf3\xfc\xff')
