def test_raw_data_load_data_in_memory(sample_ids, tiny_files_structure):
raw = RawData(sample_ids)
raw.load_data_in_memory()
assert not raw.correlations
assert raw.y.all().all()
assert not raw.icn
assert not raw.fmri_maps
def load_data(self, ids: np.ndarray, set_id: str,
file_structure: Structure) -> RawData:
raw = RawData(ids, set_id)
raw.load_data_in_memory(fmri_path=file_structure.raw.fmri_map)
return raw
def build_dataset(self, raw: RawData, out_path: Path) -> dd.DataFrame:
raw.load_data_in_memory(fmri_path=structure.raw.fmri_map)
ddf = self.make_fmri_features(raw.fmri_maps)
return ddf
def load_data(self, ids: np.ndarray, set_id: str,
file_structure: Structure) -> RawData:
raw = RawData(ids, set_id)
raw.load_data_in_memory(file_structure.raw.correlations)
return raw