def data_content(request):
projectName = getVarFromRequest(request, PROJECT_NAME)
manager = Manager()
request.session[CTX_PROJECT_PATH] = manager.getProjectPath(projectName)
# project = loadProject(request)
context = {CTX_PROJECT_NAME: projectName,
'editTool': getResourceIcon('edit_toolbar'),
'graph_utils': getResourceJs('graph_utils'),
'project_content_utils': getResourceJs('project_content_utils'),
'data_content_utils': getResourceJs('data_content_utils'),
'jquery_cookie': getResourceJs('jquery_cookie'),
'jquery_treeview': getResourceJs('jquery_treeview'),
'project_content_css': getResourceCss('project_content'),
'view': 'data'
}
context = base_flex(request, context)
return render_to_response('data_content/data_content.html', context)
def data_content(request):
projectName = request.GET.get('projectName', None)
manager = Manager()
request.session['projectPath'] = manager.getProjectPath(projectName)
project = loadProject(request)
context = {'projectName': projectName,
'editTool': getResourceIcon('edit_toolbar'),
'graph_utils': getResourceJs('graph_utils'),
'project_content_utils': getResourceJs('project_content_utils'),
'data_content_utils': getResourceJs('data_content_utils'),
'jquery_cookie': getResourceJs('jquery_cookie'),
'jquery_treeview': getResourceJs('jquery_treeview'),
'project_content_css':getResourceCss('project_content'),
'view':'data'
}
context = base_flex(request, context)
return render_to_response('data_content/data_content.html', context)
if n <> 2:
usage("This script accepts 1 parameter: the project name.")
projName = sys.argv[1]
path = os.path.join(os.environ['SCIPION_HOME'], 'pyworkflow', 'gui',
'no-tkinter')
sys.path.insert(1, path)
# Create a new project
manager = Manager()
if not manager.hasProject(projName):
usage("There is no project with this name: %s" % pwutils.red(projName))
# the project may be a soft link which may be unavailable to the cluster so get the real path
try:
projectPath = os.readlink(manager.getProjectPath(projName))
except:
projectPath = manager.getProjectPath(projName)
project = Project(projectPath)
project.load()
runs = project.getRuns()
# Now assuming that there is no dependencies between runs
# and the graph is lineal
for prot in runs:
project.scheduleProtocol(prot)
ALL_RELATIONS = 'all'
def usage(error):
print """
ERROR: %s
""" % error
sys.exit(1)
delete = '--delete' in sys.argv
# Create a new project
manager = Manager()
missing = []
for projName in os.listdir(manager.PROJECTS):
entry = manager.getProjectPath(projName)
#print " entry: ", entry, " islink: ", os.path.islink(entry), " exists: ", os.path.exists(entry)
if os.path.islink(entry) and not os.path.exists(entry):
missing.append(entry)
if missing:
print "Missing projects:"
print " \n".join(missing)
if delete:
for entry in missing:
print "Removing: ", entry
os.remove(entry)
customUserData = os.path.join(os.environ['SCIPION_USER_DATA'],
'tmp', tempSpace)
projectsDir = os.path.join(customUserData, 'projects')
pwutils.makePath(projectsDir)
print "Loading projects from:\n", projectsDir
projName = os.path.basename(pathToProj)
pwutils.createAbsLink(pathToProj, os.path.join(projectsDir, projName))
# Create a new project
manager = Manager(SCIPION_USER_DATA=customUserData)
proj = manager.loadProject(projName)
projPath = manager.getProjectPath(projName)
class EditorProjectWindow(ProjectWindow):
def close(self, e=None):
try:
print "Deleting temporary folder: ", customUserData
pwutils.cleanPath(customUserData)
except Exception, ex:
print "Error: ", ex
ProjectWindow.close(self, e)
projWindow = EditorProjectWindow(projPath)
projWindow.show()
from pyworkflow.gui.project import ProjectWindow
if __name__ == '__main__':
# Add callback for remote debugging if available.
try:
from rpdb2 import start_embedded_debugger
from signal import signal, SIGUSR2
signal(SIGUSR2, lambda sig, frame: start_embedded_debugger('a'))
except ImportError:
pass
if len(sys.argv) > 1:
manager = Manager()
projName = os.path.basename(sys.argv[1])
if projName == 'last': # Get last project
projects = manager.listProjects()
if not projects:
sys.exit("No projects yet, cannot open the last one.")
projName = projects[0].projName
projPath = manager.getProjectPath(projName)
try:
projWindow = ProjectWindow(projPath)
except Exception as e:
sys.exit(e)
projWindow.show()
else:
print "usage: pw_project.py PROJECT_NAME"
if n <>2:
usage("This script accepts 1 parameter: the project name.")
projName = sys.argv[1]
path = os.path.join(os.environ['SCIPION_HOME'], 'pyworkflow', 'gui', 'no-tkinter')
sys.path.insert(1, path)
# Create a new project
manager = Manager()
if not manager.hasProject(projName):
usage("There is no project with this name: %s"
% pwutils.red(projName))
# the project may be a soft link which may be unavailable to the cluster so get the real path
try:
projectPath = os.readlink(manager.getProjectPath(projName))
except:
projectPath = manager.getProjectPath(projName)
project = Project(projectPath)
project.load()
runs = project.getRuns()
# Now assuming that there is no dependencies between runs
# and the graph is lineal
for prot in runs:
project.scheduleProtocol(prot)
