def synonym(self, label):
'''
Retreives the best PubChem id using a registered synonym
CAS # is an example of a synonym that works well.
'''
uri = _base + 'pug/compound/name/%s/xrefs/RegistryID/XML' % (label, )
xml = urlopen(uri).read()
xml = xml.replace('xmlns=' + _pug_rest, '')
order = pug_rest.CreateFromDOM(domutils.StringToDOM(xml))
o = order.Information[0].CID[0]
self.cid = str(o)
def pubchem_xrefs(self, id):
'''
Retrieves the external references, given a PubChem
identifier
'''
uri = _base + 'pug/compound/cid/%s/xrefs/SBURL/xml' % (id, )
xml = urlopen(uri).read()
xml = xml.replace('xmlns=' + _pug_rest, '')
order = pug_rest.CreateFromDOM(domutils.StringToDOM(xml))
o = order.Information[0]
urls = o.SBURL
self.urls = urls
import dict
import urllib2
import pyxb.utils.domutils as domutils
from xml.dom import minidom
# Get the list of dictionaries available from the service.
port_uri = 'http://services.aonaware.com/DictService/DictService.asmx'
uri = port_uri + '/DictionaryList'
dle_xml = urllib2.urlopen(uri).read()
dle_dom = domutils.StringToDOM(dle_xml)
dle = dict.ArrayOfDictionary.createFromDOM(dle_dom)
op_path = '/DictionaryInfo'
for d in dle.Dictionary:
# Create a REST-style query to retrieve the information about this dictionary.
uri = '%s%s?dictId=%s' % (port_uri, op_path, d.Id)
resp = urllib2.urlopen(uri).read()
# The response is a simple type derived from string, so we can
# just extract and print it.
di_resp = dict.CreateFromDOM(domutils.StringToDOM(resp))
# Do the "encode" garbage because one of these dictionaries has a
# non-ASCII character
print "%s (%s)\n%s\n" % (d.Name.encode('utf-8'), d.Id.encode('utf-8'),
di_resp.encode('utf-8'))
# Override the position from the command line
if 2 < len(sys.argv):
lat = float(sys.argv[1])
lon = float(sys.argv[2])
# Import the schema bindings that were extracted from the WSDL in a
# separate, previous step.
import ndfd
# Read in the WSDL spec for the service. Note that we have to process
# the schema again here, because we were unable to save the component
# model for it before, and we need the definition maps in order to
# resolve part type references in the WSDL messages.
import pyxb.bundles.wssplat.wsdl11 as wsdl
uri_src = open('ndfdXML.wsdl')
doc = domutils.StringToDOM(uri_src.read())
spec = wsdl.definitions.createFromDOM(doc.documentElement, process_schema=True)
# Create a helper that will generate XML in the WSDL's namespace,
# qualifying every element with xsi:type just like the service
# expects.
bds = domutils.BindingDOMSupport(default_namespace=spec.targetNamespace(),
require_xsi_type=True)
# Set the parameters that you want enabled. See
# http://www.nws.noaa.gov/xml/docs/elementInputNames.php
weather_params = ndfd.weatherParametersType(maxt=True,
mint=True,
temp=True,
sky=True,
pop12=True,
# Override the position from the command line
if 2 < len(sys.argv):
lat = float(sys.argv[1])
lon = float(sys.argv[2])
# Import the schema bindings that were extracted from the WSDL in a
# separate, previous step.
import ndfd
# Read in the WSDL spec for the service. Note that we have to process
# the schema again here, because we were unable to save the component
# model for it before, and we need the definition maps in order to
# resolve part type references in the WSDL messages.
import pyxb.bundles.wssplat.wsdl11 as wsdl
uri_src = open('ndfdXML.wsdl')
doc = domutils.StringToDOM(uri_src.read())
spec = wsdl.definitions.createFromDOM(doc.documentElement, process_schema=True)
# Create a helper that will generate XML in the WSDL's namespace,
# qualifying every element with xsi:type just like the service
# expects.
bds = domutils.BindingDOMSupport(default_namespace=spec.targetNamespace(), require_xsi_type=True)
# Set the parameters that you want enabled. See
# http://www.nws.noaa.gov/xml/docs/elementInputNames.php
weather_params = ndfd.weatherParametersType(maxt=True, mint=True, temp=True, sky=True, pop12=True, rh=True, wx=True, appt=True)
# The schema didn't say the other parameters are optional (even though
# they are), so set them to false if not already initialized.
for eu in weather_params._ElementMap.values():
if eu.value(weather_params) is None:
from __future__ import print_function
import time
import urllib2
import weather # Bindings generated by PyXB
import pyxb.utils.domutils as domutils
uri = 'http://wsf.cdyne.com/WeatherWS/Weather.asmx/GetCityForecastByZIP?ZIP=55113'
xml = urllib2.urlopen(uri).read()
doc = domutils.StringToDOM(xml)
fc_return = weather.CreateFromDOM(doc.documentElement)
if fc_return.Success:
print('Weather forecast for %s, %s:' % (fc_return.City, fc_return.State))
for fc in fc_return.ForecastResult.Forecast:
when = time.strftime('%A, %B %d %Y', fc.Date.timetuple())
outlook = fc.Desciption # typos in WSDL left unchanged
low = fc.Temperatures.MorningLow
high = fc.Temperatures.DaytimeHigh
print(' %s: %s, from %s to %s' % (when, outlook, low, high))
import dict
import urllib2
import pyxb.utils.domutils as domutils
import sys
word = 'xml'
if 1 < len(sys.argv):
word = sys.argv[1]
# Create a REST-style query to retrieve the information about this dictionary.
uri = 'http://services.aonaware.com/DictService/DictService.asmx/Define?word=%s' % (
word, )
rxml = urllib2.urlopen(uri).read()
resp = dict.CreateFromDOM(domutils.StringToDOM(rxml))
print 'Definitions of %s:' % (resp.Word, )
for definition in resp.Definitions.Definition:
print 'From %s (%s):' % (definition.Dictionary.Name,
definition.Dictionary.Id)
print definition.WordDefinition
print