Пример #1
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def load_last_experiment() -> Experiment:
    """
    Load last experiment (from database file from config)

    Returns:
        last experiment
    """
    last_exp_id = get_last_experiment(connect(get_DB_location()))
    if last_exp_id is None:
        raise ValueError('There are no experiments in the database file')
    return Experiment(exp_id=last_exp_id)
Пример #2
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def load_last_experiment(conn: Optional[ConnectionPlus] = None) -> Experiment:
    """
    Load last experiment (from database file from config)

    Returns:
        last experiment
    """
    conn = conn or connect(get_DB_location())
    last_exp_id = get_last_experiment(conn)
    if last_exp_id is None:
        raise ValueError('There are no experiments in the database file')
    return Experiment(exp_id=last_exp_id, conn=conn)
Пример #3
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def load_last_experiment() -> Experiment:
    """
    Load last experiment (from database file from config)

    Returns:
        last experiment
    """
    conn = connect(get_DB_location())
    last_exp_id = get_last_experiment(conn)
    if last_exp_id is None:
        raise ValueError('There are no experiments in the database file')
    experiment = Experiment(exp_id=last_exp_id)
    _set_default_experiment_id(get_DB_location(), experiment.exp_id)
    return experiment
Пример #4
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def get_default_experiment_id(conn: ConnectionPlus) -> int:
    """
    Returns the latest created/ loaded experiment's exp_id as the default
    experiment. If it is not set the maximum exp_id returned as the default.
    If no experiment is found in the database, a ValueError is raised.

    Args:
        conn: Open connection to the db in question.

    Returns:
        exp_id of the default experiment.

    Raises:
        ValueError: If no experiment exists in the given db.
    """
    db_path = path_to_dbfile(conn)
    exp_id = _get_latest_default_experiment_id(db_path)
    if exp_id is None:
        exp_id = get_last_experiment(conn)
    if exp_id is None:
        raise ValueError("No experiments found."
                         " You can create one with:"
                         " new_experiment(name, sample_name)")
    return exp_id
Пример #5
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def test_get_last_experiment_no_experiments(empty_temp_db):
    conn = mut_db.connect(get_DB_location())
    assert None is mut_queries.get_last_experiment(conn)
Пример #6
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def test_get_last_experiment(experiment):
    assert experiment.exp_id \
           == mut_queries.get_last_experiment(experiment.conn)
Пример #7
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    def __init__(self,
                 path_to_db: str = None,
                 run_id: Optional[int] = None,
                 conn: Optional[ConnectionPlus] = None,
                 exp_id=None,
                 name: str = None,
                 specs: Optional[SpecsOrInterDeps] = None,
                 values=None,
                 metadata=None) -> None:
        """
        Create a new DataSet object. The object can either hold a new run or
        an already existing run. If a run_id is provided, then an old run is
        looked up, else a new run is created.

        Args:
            path_to_db: path to the sqlite file on disk. If not provided, the
              path will be read from the config.
            run_id: provide this when loading an existing run, leave it
              as None when creating a new run
            conn: connection to the DB; if provided and `path_to_db` is
              provided as well, then a ValueError is raised (this is to
              prevent the possibility of providing a connection to a DB
              file that is different from `path_to_db`)
            exp_id: the id of the experiment in which to create a new run.
              Ignored if run_id is provided.
            name: the name of the dataset. Ignored if run_id is provided.
            specs: paramspecs belonging to the dataset. Ignored if run_id is
              provided.
            values: values to insert into the dataset. Ignored if run_id is
              provided.
            metadata: metadata to insert into the dataset. Ignored if run_id
              is provided.
        """
        if path_to_db is not None and conn is not None:
            raise ValueError("Both `path_to_db` and `conn` arguments have "
                             "been passed together with non-None values. "
                             "This is not allowed.")
        self._path_to_db = path_to_db or get_DB_location()

        self.conn = make_connection_plus_from(conn) if conn is not None else \
            connect(self.path_to_db)

        self._run_id = run_id
        self._debug = False
        self.subscribers: Dict[str, _Subscriber] = {}
        self._interdeps: InterDependencies_

        if run_id is not None:
            if not run_exists(self.conn, run_id):
                raise ValueError(f"Run with run_id {run_id} does not exist in "
                                 f"the database")
            self._completed = completed(self.conn, self.run_id)
            run_desc = self._get_run_description_from_db()
            if run_desc._old_style_deps:
                # TODO: what if the old run had invalid interdep.s?
                old_idps: InterDependencies = cast(InterDependencies,
                                                   run_desc.interdeps)
                self._interdeps = old_to_new(old_idps)
            else:
                new_idps: InterDependencies_ = cast(InterDependencies_,
                                                    run_desc.interdeps)
                self._interdeps = new_idps
            self._metadata = get_metadata_from_run_id(self.conn, run_id)
            self._started = self.run_timestamp_raw is not None

        else:
            # Actually perform all the side effects needed for the creation
            # of a new dataset. Note that a dataset is created (in the DB)
            # with no parameters; they are written to disk when the dataset
            # is marked as started
            if exp_id is None:
                if len(get_experiments(self.conn)) > 0:
                    exp_id = get_last_experiment(self.conn)
                else:
                    raise ValueError("No experiments found."
                                     "You can start a new one with:"
                                     " new_experiment(name, sample_name)")
            name = name or "dataset"
            _, run_id, __ = create_run(self.conn,
                                       exp_id,
                                       name,
                                       generate_guid(),
                                       parameters=None,
                                       values=values,
                                       metadata=metadata)
            # this is really the UUID (an ever increasing count in the db)
            self._run_id = run_id
            self._completed = False
            self._started = False
            if isinstance(specs, InterDependencies_):
                self._interdeps = specs
            elif specs is not None:
                self._interdeps = old_to_new(InterDependencies(*specs))
            else:
                self._interdeps = InterDependencies_()
            self._metadata = get_metadata_from_run_id(self.conn, self.run_id)