def _add_metadata(bt, md_key, lines):
"""Add metadata to formatted correlation output lines."""
taxonomy_md = biom_taxonomy_formatter(bt, md_key)
if taxonomy_md is not None:
for i in range(len(lines)-1): #one more line than OTU
lines[i+1]=lines[i+1]+'\t'+taxonomy_md[i] #skip header line in lines
return lines
else: # remove md_header from the first line
nls = ['\t'.join(lines[0].split('\t')[:-1])] + lines[1:]
return nls
def _add_metadata(bt, md_key, lines):
"""Add metadata to formatted correlation output lines."""
taxonomy_md = biom_taxonomy_formatter(bt, md_key)
if taxonomy_md is not None:
for i in range(len(lines) - 1): #one more line than OTU
lines[i + 1] = lines[i + 1] + '\t' + taxonomy_md[
i] #skip header line in lines
return lines
else: # remove md_header from the first line
nls = ['\t'.join(lines[0].split('\t')[:-1])] + lines[1:]
return nls