def __init__(self, url, username, password):
KDialog.__init__(self)
decorateWindow(self, i18n('Create User Account'))
self.setButtons(KDialog.ButtonCode(KDialog.Ok | KDialog.Cancel))
vbox = QVBoxLayout()
grid = QFormLayout()
self.lbServer = QLabel()
self.lbServer.setText(url)
grid.addRow(i18n('Game server:'), self.lbServer)
self.lbUser = QLabel()
grid.addRow(i18n('Username:'******'Password:'******'Repeat password:'), self.edPassword2)
vbox.addLayout(grid)
widget = QWidget(self)
widget.setLayout(vbox)
self.setMainWidget(widget)
pol = QSizePolicy()
pol.setHorizontalPolicy(QSizePolicy.Expanding)
self.lbUser.setSizePolicy(pol)
self.edPassword.textChanged.connect(self.passwordChanged)
self.edPassword2.textChanged.connect(self.passwordChanged)
StateSaver(self)
self.username = username
self.password = password
self.passwordChanged()
self.edPassword2.setFocus()
def setupUi(self):
"""create all Ui elements but do not fill them"""
self.buttonBox = KDialogButtonBox(self)
self.buttonBox.setStandardButtons(QDialogButtonBox.Cancel
| QDialogButtonBox.Ok)
# Ubuntu 11.10 unity is a bit strange - without this, it sets focus on
# the cancel button (which it shows on the left). I found no obvious
# way to use setDefault and setAutoDefault for fixing this.
self.buttonBox.button(QDialogButtonBox.Ok).setFocus(True)
self.buttonBox.accepted.connect(self.accept)
self.buttonBox.rejected.connect(self.reject)
vbox = QVBoxLayout(self)
self.grid = QFormLayout()
self.cbServer = QComboBox()
self.cbServer.setEditable(True)
self.grid.addRow(i18n('Game server:'), self.cbServer)
self.cbUser = QComboBox()
self.cbUser.setEditable(True)
self.grid.addRow(i18n('Username:'******'Password:'******'kajongg', 'Ruleset:'), self.cbRuleset)
vbox.addLayout(self.grid)
vbox.addWidget(self.buttonBox)
pol = QSizePolicy()
pol.setHorizontalPolicy(QSizePolicy.Expanding)
self.cbUser.setSizePolicy(pol)
self.__port = None
def setupInputFrame(self, parent=None):
if not parent:
parent = self.layout
self.bgMultiVolumeSelector = slicer.qMRMLNodeComboBox()
self.bgMultiVolumeSelector.nodeTypes = ['vtkMRMLMultiVolumeNode']
self.bgMultiVolumeSelector.setMRMLScene(slicer.mrmlScene)
self.bgMultiVolumeSelector.addEnabled = 0
self._bgMultiVolumeSelectorLabel = QLabel('Input multivolume')
inputFrameWidget = QWidget()
self.inputFrameLayout = QFormLayout()
inputFrameWidget.setLayout(self.inputFrameLayout)
self.inputFrameLayout.addRow(self._bgMultiVolumeSelectorLabel, self.bgMultiVolumeSelector)
parent.addWidget(inputFrameWidget)
def __init__(self, phl_obj=None, parent=None):
super(IndexSimplerParamTab, self).__init__()
# self.param_widget_parent = parent.param_widget_parent
# indexing_method_check = QCheckBox("indexing.method")
hbox_method = QHBoxLayout()
label_method_62 = QLabel("Indexing method")
hbox_method.addWidget(label_method_62)
box_method_62 = DefaultComboBox(
"indexing.method",
["fft3d", "fft1d", "real_space_grid_search", "low_res_spot_match"])
box_method_62.currentIndexChanged.connect(self.combobox_changed)
hbox_method.addWidget(box_method_62)
max_cell_label = QLabel("Max cell")
max_cell_spn_bx = QDoubleSpinBox()
max_cell_spn_bx.setSingleStep(5.0)
max_cell_spn_bx.local_path = "indexing.max_cell"
max_cell_spn_bx.setSpecialValueText("Auto")
max_cell_spn_bx.editingFinished.connect(self.spnbox_finished)
space_group_label = QLabel("Space group")
space_group_line = QLineEdit()
# Simple validator to allow only characters in H-M symbols
regex = QRegExp("[ABCPIFR][0-9a-d\-/:nmHR]+")
validatorHM = QRegExpValidator(regex)
space_group_line.setValidator(validatorHM)
space_group_line.local_path = "indexing.known_symmetry.space_group"
space_group_line.editingFinished.connect(self.line_changed)
unit_cell_label = QLabel("Unit cell")
unit_cell_line = QLineEdit()
regex = QRegExp("[0-9\., ]+")
validatorUC = QRegExpValidator(regex)
unit_cell_line.setValidator(validatorUC)
unit_cell_line.local_path = "indexing.known_symmetry.unit_cell"
unit_cell_line.editingFinished.connect(self.line_changed)
localLayout = QVBoxLayout()
localLayout.addLayout(hbox_method)
qf = QFormLayout()
qf.addRow(max_cell_label, max_cell_spn_bx)
qf.addRow(space_group_label, space_group_line)
qf.addRow(unit_cell_label, unit_cell_line)
localLayout.addLayout(qf)
self.inner_reset_btn = ResetButton()
localLayout.addWidget(self.inner_reset_btn)
localLayout.addStretch()
self.setLayout(localLayout)
self.lst_var_widg = _get_all_direct_layout_widget_children(localLayout)
def setup(self):
showPlusServerWidget = True
if _platform == "linux" or _platform == "linux2" or _platform == "darwin": #linux or linux or OS X
message = "Attention: You are running Slicer on Linux or OS X. Do you have PlusServer installed on the current OS?"
result = QMessageBox.question(slicer.util.mainWindow(),
'ProstateTRUSNav', message,
QMessageBox.Yes | QMessageBox.No)
showPlusServerWidget = result == QMessageBox.Yes
if _platform == "win32" or showPlusServerWidget:
# Windows...
plusServerCollapsibleButton = ctkCollapsibleButton()
plusServerCollapsibleButton.text = "PlusServer"
self.layout.addWidget(plusServerCollapsibleButton)
self.configurationFileChooserButton = QPushButton(
self.configurationFile)
self.configurationFileChooserButton.connect(
'clicked()', self.onConfigFileSelected)
self.runPlusServerButton = QPushButton("Run PlusServer")
self.runPlusServerButton.setCheckable(True)
self.runPlusServerButton.connect('clicked()',
self.onRunPlusServerButtonClicked)
self.serverFormLayout = QFormLayout(plusServerCollapsibleButton)
self.serverExecutableChooserButton = QPushButton(
self.serverExecutable)
self.serverExecutableChooserButton.connect(
'clicked()', self.onServerExecutableSelected)
hbox = QHBoxLayout()
hbox.addWidget(self.serverExecutableChooserButton)
self.serverFormLayout.addRow(hbox)
hbox = QHBoxLayout()
hbox.addWidget(self.configurationFileChooserButton)
hbox.addWidget(self.runPlusServerButton)
self.serverFormLayout.addRow(hbox)
GuideletWidget.setup(self)
# do specific setup here
if _platform == "win32" or showPlusServerWidget:
self.launchGuideletButton.setEnabled(False)
self.checkExecutableAndArgument()
def setupInputFrame(self, parent=None):
self.inputFrame = ctk.ctkCollapsibleButton()
self.inputFrame.text = "Input"
self.inputFrame.collapsed = 0
inputFrameCollapsibleLayout = QFormLayout(self.inputFrame)
qSlicerMultiVolumeExplorerSimplifiedModuleWidget.setupInputFrame(self, parent=inputFrameCollapsibleLayout)
self.layout.addWidget(self.inputFrame)
self.fgMultiVolumeSelector = slicer.qMRMLNodeComboBox()
self.fgMultiVolumeSelector.nodeTypes = ['vtkMRMLMultiVolumeNode']
self.fgMultiVolumeSelector.setMRMLScene(slicer.mrmlScene)
self.fgMultiVolumeSelector.addEnabled = 0
self.fgMultiVolumeSelector.noneEnabled = 1
self.fgMultiVolumeSelector.toolTip = "Secondary multivolume will be used for the secondary \
plot in interactive charting. As an example, this can be used to overlay the \
curve obtained by fitting a model to the data"
self.inputFrameLayout.addRow(QLabel('Input secondary multivolume'), self.fgMultiVolumeSelector)
def setup(self):
showPlusServerWidget = True
if _platform == "linux" or _platform == "linux2" or _platform == "darwin": #linux or linux or OS X
message = "Attention: You are running Slicer on Linux or OS X. Do you have PlusServer installed on the current OS?"
result = QMessageBox.question(slicer.util.mainWindow(), 'ProstateTRUSNav', message,
QMessageBox.Yes | QMessageBox.No)
showPlusServerWidget = result == QMessageBox.Yes
if _platform == "win32" or showPlusServerWidget:
# Windows...
plusServerCollapsibleButton = ctkCollapsibleButton()
plusServerCollapsibleButton.text = "PlusServer"
self.layout.addWidget(plusServerCollapsibleButton)
self.configurationFileChooserButton = QPushButton(self.configurationFile)
self.configurationFileChooserButton.connect('clicked()', self.onConfigFileSelected)
self.runPlusServerButton = QPushButton("Run PlusServer")
self.runPlusServerButton.setCheckable(True)
self.runPlusServerButton.connect('clicked()', self.onRunPlusServerButtonClicked)
self.serverFormLayout = QFormLayout(plusServerCollapsibleButton)
self.serverExecutableChooserButton = QPushButton(self.serverExecutable)
self.serverExecutableChooserButton.connect('clicked()', self.onServerExecutableSelected)
hbox = QHBoxLayout()
hbox.addWidget(self.serverExecutableChooserButton)
self.serverFormLayout.addRow(hbox)
hbox = QHBoxLayout()
hbox.addWidget(self.configurationFileChooserButton)
hbox.addWidget(self.runPlusServerButton)
self.serverFormLayout.addRow(hbox)
GuideletWidget.setup(self)
# do specific setup here
if _platform == "win32" or showPlusServerWidget:
self.launchGuideletButton.setEnabled(False)
self.checkExecutableAndArgument()
class qSlicerMultiVolumeExplorerSimplifiedModuleWidget:
def __init__(self, parent=None):
logging.debug(
"qSlicerMultiVolumeExplorerSimplifiedModuleWidget:init() called")
if not parent or not hasattr(parent, "layout"):
self.parent = slicer.qMRMLWidget()
self.parent.setLayout(QVBoxLayout())
else:
self.parent = parent
self.layout = self.parent.layout()
self._bgMultiVolumeNode = None
self._fgMultiVolumeNode = None
self.styleObserverTags = []
self.sliceWidgetsPerStyle = {}
self.chartPopupWindow = None
self.chartPopupSize = QSize(600, 300)
self.chartPopupPosition = QPoint(0, 0)
def hide(self):
self.widget.hide()
def show(self):
self.widget.show()
def setup(self):
self.widget = QWidget()
layout = QGridLayout()
self.widget.setLayout(layout)
self.layout.addWidget(self.widget)
self.widget.show()
self.layout = layout
self.setupInputFrame()
self.setupFrameControlFrame()
self.setupAdditionalFrames()
self.setupPlottingFrame()
self.setFramesEnabled(False)
self.timer = QTimer()
self.timer.setInterval(50)
self.setupConnections()
# initialize slice observers (from DataProbe.py)
# keep list of pairs: [observee,tag] so they can be removed easily
self.styleObserverTags = []
# keep a map of interactor styles to sliceWidgets so we can easily get sliceLogic
self.sliceWidgetsPerStyle = {}
self.refreshObservers()
def setupInputFrame(self, parent=None):
if not parent:
parent = self.layout
self.bgMultiVolumeSelector = slicer.qMRMLNodeComboBox()
self.bgMultiVolumeSelector.nodeTypes = ['vtkMRMLMultiVolumeNode']
self.bgMultiVolumeSelector.setMRMLScene(slicer.mrmlScene)
self.bgMultiVolumeSelector.addEnabled = 0
self._bgMultiVolumeSelectorLabel = QLabel('Input multivolume')
inputFrameWidget = QWidget()
self.inputFrameLayout = QFormLayout()
inputFrameWidget.setLayout(self.inputFrameLayout)
self.inputFrameLayout.addRow(self._bgMultiVolumeSelectorLabel,
self.bgMultiVolumeSelector)
parent.addWidget(inputFrameWidget)
def setupFrameControlFrame(self):
# TODO: initialize the slider based on the contents of the labels array
self.frameSlider = ctk.ctkSliderWidget()
self.frameSlider.setSizePolicy(QSizePolicy.Ignored,
QSizePolicy.Preferred)
self.frameLabel = QLabel('Current frame number')
self.playButton = QPushButton('Play')
self.playButton.toolTip = 'Iterate over multivolume frames'
self.playButton.checkable = True
frameControlHBox = QHBoxLayout()
frameControlHBox.addWidget(self.frameLabel)
frameControlHBox.addWidget(self.frameSlider)
frameControlHBox.addWidget(self.playButton)
self.inputFrameLayout.addRow(frameControlHBox)
def setupAdditionalFrames(self):
pass
def setupPlottingFrame(self, parent=None):
if not parent:
parent = self.layout
self.plottingFrameWidget = QWidget()
self.plottingFrameLayout = QGridLayout()
self.plottingFrameWidget.setLayout(self.plottingFrameLayout)
self._multiVolumeIntensityChart = MultiVolumeIntensityChartView()
self.popupChartButton = QPushButton("Undock chart")
self.popupChartButton.setCheckable(True)
self.plottingFrameLayout.addWidget(
self._multiVolumeIntensityChart.chartView)
self.plottingFrameLayout.addWidget(self.popupChartButton)
parent.addWidget(self.plottingFrameWidget)
def setupConnections(self):
self.parent.connect('mrmlSceneChanged(vtkMRMLScene*)',
self.onVCMRMLSceneChanged)
self.bgMultiVolumeSelector.connect('currentNodeChanged(vtkMRMLNode*)',
self.onBackgroundInputChanged)
self.playButton.connect('toggled(bool)', self.onPlayButtonToggled)
self.frameSlider.connect('valueChanged(double)', self.onSliderChanged)
self.timer.connect('timeout()', self.goToNext)
self.popupChartButton.connect('toggled(bool)',
self.onDockChartViewToggled)
def onDockChartViewToggled(self, checked):
if checked:
self.chartPopupWindow = QDialog()
self.chartPopupWindow.setWindowFlags(
PythonQt.QtCore.Qt.WindowStaysOnTopHint)
layout = QGridLayout()
self.chartPopupWindow.setLayout(layout)
layout.addWidget(self._multiVolumeIntensityChart.chartView)
layout.addWidget(self.popupChartButton)
self.chartPopupWindow.finished.connect(self.dockChartView)
self.chartPopupWindow.resize(self.chartPopupSize)
self.chartPopupWindow.move(self.chartPopupPosition)
self.chartPopupWindow.show()
self.popupChartButton.setText("Dock chart")
self._multiVolumeIntensityChart.chartView.show()
else:
self.chartPopupWindow.close()
def dockChartView(self):
self.chartPopupSize = self.chartPopupWindow.size
self.chartPopupPosition = self.chartPopupWindow.pos
self.plottingFrameLayout.addWidget(
self._multiVolumeIntensityChart.chartView)
self.plottingFrameLayout.addWidget(self.popupChartButton)
self.popupChartButton.setText("Undock chart")
self.popupChartButton.disconnect('toggled(bool)',
self.onDockChartViewToggled)
self.popupChartButton.checked = False
self.popupChartButton.connect('toggled(bool)',
self.onDockChartViewToggled)
def onSliderChanged(self, frameId):
if self._bgMultiVolumeNode is None:
return
newValue = int(frameId)
self.setCurrentFrameNumber(newValue)
def onVCMRMLSceneChanged(self, mrmlScene):
logging.debug(
"qSlicerMultiVolumeExplorerSimplifiedModuleWidget:onVCMRMLSceneChanged"
)
self.bgMultiVolumeSelector.setMRMLScene(slicer.mrmlScene)
self.onBackgroundInputChanged()
def refreshGUIForNewBackgroundImage(self):
self._multiVolumeIntensityChart.reset()
self.setFramesEnabled(True)
if self._fgMultiVolumeNode and self._bgMultiVolumeNode:
Helper.SetBgFgVolumes(self._bgMultiVolumeNode.GetID(),
self._fgMultiVolumeNode.GetID())
else:
Helper.SetBgVolume(self._bgMultiVolumeNode.GetID())
self.refreshFrameSlider()
self._multiVolumeIntensityChart.bgMultiVolumeNode = self._bgMultiVolumeNode
self.refreshObservers()
def getBackgroundMultiVolumeNode(self):
return self.bgMultiVolumeSelector.currentNode()
def onBackgroundInputChanged(self):
self._bgMultiVolumeNode = self.getBackgroundMultiVolumeNode()
if self._bgMultiVolumeNode is not None:
self.refreshGUIForNewBackgroundImage()
else:
self.setFramesEnabled(False)
def onPlayButtonToggled(self, checked):
if self._bgMultiVolumeNode is None:
return
if checked:
self.timer.start()
self.playButton.text = 'Stop'
else:
self.timer.stop()
self.playButton.text = 'Play'
def processEvent(self, observee, event):
# logging.debug("processing event %s" % event)
if self._bgMultiVolumeNode is None:
return
# TODO: use a timer to delay calculation and compress events
if event == 'LeaveEvent':
# reset all the readouts
# TODO: reset the label text
return
if not self.sliceWidgetsPerStyle.has_key(observee):
return
interactor = observee.GetInteractor()
self.createChart(self.sliceWidgetsPerStyle[observee],
interactor.GetEventPosition())
def createChart(self, sliceWidget, position):
self._multiVolumeIntensityChart.createChart(sliceWidget, position)
def setCurrentFrameNumber(self, frameNumber):
mvDisplayNode = self._bgMultiVolumeNode.GetDisplayNode()
mvDisplayNode.SetFrameComponent(frameNumber)
def setFramesEnabled(self, enabled):
pass
def refreshObservers(self):
""" When the layout changes, drop the observers from
all the old widgets and create new observers for the
newly created widgets"""
self.removeObservers()
# get new slice nodes
layoutManager = slicer.app.layoutManager()
sliceNodeCount = slicer.mrmlScene.GetNumberOfNodesByClass(
'vtkMRMLSliceNode')
for nodeIndex in xrange(sliceNodeCount):
# find the widget for each node in scene
sliceNode = slicer.mrmlScene.GetNthNodeByClass(
nodeIndex, 'vtkMRMLSliceNode')
sliceWidget = layoutManager.sliceWidget(sliceNode.GetLayoutName())
if sliceWidget:
# add observers and keep track of tags
style = sliceWidget.sliceView().interactorStyle()
self.sliceWidgetsPerStyle[style] = sliceWidget
events = ("MouseMoveEvent", "EnterEvent", "LeaveEvent")
for event in events:
tag = style.AddObserver(event, self.processEvent)
self.styleObserverTags.append([style, tag])
def removeObservers(self):
for observee, tag in self.styleObserverTags:
observee.RemoveObserver(tag)
self.styleObserverTags = []
self.sliceWidgetsPerStyle = {}
def refreshFrameSlider(self):
self.frameSlider.minimum = 0
if not self._bgMultiVolumeNode:
self.frameSlider.maximum = 0
return
nFrames = self._bgMultiVolumeNode.GetNumberOfFrames()
self.frameSlider.maximum = nFrames - 1
def goToNext(self):
currentElement = self.frameSlider.value
currentElement += 1
if currentElement > self.frameSlider.maximum:
currentElement = 0
self.frameSlider.value = currentElement
def setupPlotSettingsFrame(self):
self.plotSettingsFrame = ctk.ctkCollapsibleButton()
self.plotSettingsFrame.text = "Plotting Settings"
self.plotSettingsFrame.collapsed = 1
plotSettingsFrameLayout = QFormLayout(self.plotSettingsFrame)
self.layout.addWidget(self.plotSettingsFrame)
# label map for probing
self.labelMapSelector = slicer.qMRMLNodeComboBox()
self.labelMapSelector.nodeTypes = ['vtkMRMLLabelMapVolumeNode']
self.labelMapSelector.toolTip = 'Label map to be probed'
self.labelMapSelector.setMRMLScene(slicer.mrmlScene)
self.labelMapSelector.addEnabled = 0
self.chartButton = QPushButton('Chart')
self.chartButton.setEnabled(False)
hbox = QHBoxLayout()
hbox.addWidget(QLabel('Probed label volume'))
hbox.addWidget(self.labelMapSelector)
hbox.addWidget(self.chartButton)
plotSettingsFrameLayout.addRow(hbox)
self.iCharting = QCheckBox('Interactive charting')
self.iCharting.setChecked(True)
plotSettingsFrameLayout.addRow(self.iCharting)
self.iChartingMode = QButtonGroup()
self.iChartingIntensity = QRadioButton('Signal intensity')
self.iChartingIntensityFixedAxes = QRadioButton(
'Fixed range intensity')
self.iChartingPercent = QRadioButton('Percentage change')
self.iChartingIntensity.setChecked(1)
self.iChartingMode.addButton(self.iChartingIntensity)
self.iChartingMode.addButton(self.iChartingIntensityFixedAxes)
self.iChartingMode.addButton(self.iChartingPercent)
hbox = QHBoxLayout()
self.plottingModeGroupBox = QGroupBox('Plotting mode:')
plottingModeLayout = QVBoxLayout()
self.plottingModeGroupBox.setLayout(plottingModeLayout)
plottingModeLayout.addWidget(self.iChartingIntensity)
plottingModeLayout.addWidget(self.iChartingIntensityFixedAxes)
plottingModeLayout.addWidget(self.iChartingPercent)
hbox.addWidget(self.plottingModeGroupBox)
self.showLegendCheckBox = QCheckBox('Display legend')
self.showLegendCheckBox.setChecked(0)
self.xLogScaleCheckBox = QCheckBox('Use log scale for X axis')
self.xLogScaleCheckBox.setChecked(0)
self.yLogScaleCheckBox = QCheckBox('Use log scale for Y axis')
self.yLogScaleCheckBox.setChecked(0)
self.plotGeneralSettingsGroupBox = QGroupBox('General Plot options:')
plotGeneralSettingsLayout = QVBoxLayout()
self.plotGeneralSettingsGroupBox.setLayout(plotGeneralSettingsLayout)
plotGeneralSettingsLayout.addWidget(self.showLegendCheckBox)
plotGeneralSettingsLayout.addWidget(self.xLogScaleCheckBox)
plotGeneralSettingsLayout.addWidget(self.yLogScaleCheckBox)
hbox.addWidget(self.plotGeneralSettingsGroupBox)
plotSettingsFrameLayout.addRow(hbox)
self.nFramesBaselineCalculation = QSpinBox()
self.nFramesBaselineCalculation.minimum = 1
hbox = QHBoxLayout()
hbox.addWidget(QLabel('Frame count(baseline calculation):'))
hbox.addWidget(self.nFramesBaselineCalculation)
plotSettingsFrameLayout.addRow(hbox)
class qSlicerMultiVolumeExplorerSimplifiedModuleWidget:
def __init__(self, parent=None):
logging.debug("qSlicerMultiVolumeExplorerSimplifiedModuleWidget:init() called")
if not parent or not hasattr(parent, "layout"):
self.parent = slicer.qMRMLWidget()
self.parent.setLayout(QVBoxLayout())
else:
self.parent = parent
self.layout = self.parent.layout()
self._bgMultiVolumeNode = None
self._fgMultiVolumeNode = None
self.styleObserverTags = []
self.sliceWidgetsPerStyle = {}
self.chartPopupWindow = None
self.chartPopupSize = QSize(600, 300)
self.chartPopupPosition = QPoint(0,0)
def hide(self):
self.widget.hide()
def show(self):
self.widget.show()
def setup(self):
self.widget = QWidget()
layout = QGridLayout()
self.widget.setLayout(layout)
self.layout.addWidget(self.widget)
self.widget.show()
self.layout = layout
self.setupInputFrame()
self.setupFrameControlFrame()
self.setupAdditionalFrames()
self.setupPlottingFrame()
self.setFramesEnabled(False)
self.timer = QTimer()
self.timer.setInterval(50)
self.setupConnections()
# initialize slice observers (from DataProbe.py)
# keep list of pairs: [observee,tag] so they can be removed easily
self.styleObserverTags = []
# keep a map of interactor styles to sliceWidgets so we can easily get sliceLogic
self.sliceWidgetsPerStyle = {}
self.refreshObservers()
def setupInputFrame(self, parent=None):
if not parent:
parent = self.layout
self.bgMultiVolumeSelector = slicer.qMRMLNodeComboBox()
self.bgMultiVolumeSelector.nodeTypes = ['vtkMRMLMultiVolumeNode']
self.bgMultiVolumeSelector.setMRMLScene(slicer.mrmlScene)
self.bgMultiVolumeSelector.addEnabled = 0
self._bgMultiVolumeSelectorLabel = QLabel('Input multivolume')
inputFrameWidget = QWidget()
self.inputFrameLayout = QFormLayout()
inputFrameWidget.setLayout(self.inputFrameLayout)
self.inputFrameLayout.addRow(self._bgMultiVolumeSelectorLabel, self.bgMultiVolumeSelector)
parent.addWidget(inputFrameWidget)
def setupFrameControlFrame(self):
# TODO: initialize the slider based on the contents of the labels array
self.frameSlider = ctk.ctkSliderWidget()
self.frameLabel = QLabel('Current frame number')
self.playButton = QPushButton('Play')
self.playButton.toolTip = 'Iterate over multivolume frames'
self.playButton.checkable = True
frameControlHBox = QHBoxLayout()
frameControlHBox.addWidget(self.frameLabel)
frameControlHBox.addWidget(self.frameSlider)
frameControlHBox.addWidget(self.playButton)
self.inputFrameLayout.addRow(frameControlHBox)
def setupAdditionalFrames(self):
pass
def setupPlottingFrame(self, parent=None):
if not parent:
parent = self.layout
self.plottingFrameWidget = QWidget()
self.plottingFrameLayout = QGridLayout()
self.plottingFrameWidget.setLayout(self.plottingFrameLayout)
self._multiVolumeIntensityChart = MultiVolumeIntensityChartView()
self.popupChartButton = QPushButton("Undock chart")
self.popupChartButton.setCheckable(True)
self.plottingFrameLayout.addWidget(self._multiVolumeIntensityChart.chartView)
self.plottingFrameLayout.addWidget(self.popupChartButton)
parent.addWidget(self.plottingFrameWidget)
def setupConnections(self):
self.parent.connect('mrmlSceneChanged(vtkMRMLScene*)', self.onVCMRMLSceneChanged)
self.bgMultiVolumeSelector.connect('currentNodeChanged(vtkMRMLNode*)', self.onBackgroundInputChanged)
self.playButton.connect('toggled(bool)', self.onPlayButtonToggled)
self.frameSlider.connect('valueChanged(double)', self.onSliderChanged)
self.timer.connect('timeout()', self.goToNext)
self.popupChartButton.connect('toggled(bool)', self.onDockChartViewToggled)
def onDockChartViewToggled(self, checked):
if checked:
self.chartPopupWindow = QDialog()
self.chartPopupWindow.setWindowFlags(PythonQt.QtCore.Qt.WindowStaysOnTopHint)
layout = QGridLayout()
self.chartPopupWindow.setLayout(layout)
layout.addWidget(self._multiVolumeIntensityChart.chartView)
layout.addWidget(self.popupChartButton)
self.chartPopupWindow.finished.connect(self.dockChartView)
self.chartPopupWindow.resize(self.chartPopupSize)
self.chartPopupWindow.move(self.chartPopupPosition)
self.chartPopupWindow.show()
self.popupChartButton.setText("Dock chart")
self._multiVolumeIntensityChart.chartView.show()
else:
self.chartPopupWindow.close()
def dockChartView(self):
self.chartPopupSize = self.chartPopupWindow.size
self.chartPopupPosition = self.chartPopupWindow.pos
self.plottingFrameLayout.addWidget(self._multiVolumeIntensityChart.chartView)
self.plottingFrameLayout.addWidget(self.popupChartButton)
self.popupChartButton.setText("Undock chart")
self.popupChartButton.disconnect('toggled(bool)', self.onDockChartViewToggled)
self.popupChartButton.checked = False
self.popupChartButton.connect('toggled(bool)', self.onDockChartViewToggled)
def onSliderChanged(self, frameId):
if self._bgMultiVolumeNode is None:
return
newValue = int(frameId)
self.setCurrentFrameNumber(newValue)
def onVCMRMLSceneChanged(self, mrmlScene):
logging.debug("qSlicerMultiVolumeExplorerSimplifiedModuleWidget:onVCMRMLSceneChanged")
self.bgMultiVolumeSelector.setMRMLScene(slicer.mrmlScene)
self.onBackgroundInputChanged()
def refreshGUIForNewBackgroundImage(self):
self._multiVolumeIntensityChart.reset()
self.setFramesEnabled(True)
if self._fgMultiVolumeNode and self._bgMultiVolumeNode:
Helper.SetBgFgVolumes(self._bgMultiVolumeNode.GetID(), self._fgMultiVolumeNode.GetID())
else:
Helper.SetBgVolume(self._bgMultiVolumeNode.GetID())
self.refreshFrameSlider()
self._multiVolumeIntensityChart.bgMultiVolumeNode = self._bgMultiVolumeNode
self.refreshObservers()
def getBackgroundMultiVolumeNode(self):
return self.bgMultiVolumeSelector.currentNode()
def onBackgroundInputChanged(self):
self._bgMultiVolumeNode = self.getBackgroundMultiVolumeNode()
if self._bgMultiVolumeNode is not None:
self.refreshGUIForNewBackgroundImage()
else:
self.setFramesEnabled(False)
def onPlayButtonToggled(self, checked):
if self._bgMultiVolumeNode is None:
return
if checked:
self.timer.start()
self.playButton.text = 'Stop'
else:
self.timer.stop()
self.playButton.text = 'Play'
def processEvent(self, observee, event):
# logging.debug("processing event %s" % event)
if self._bgMultiVolumeNode is None:
return
# TODO: use a timer to delay calculation and compress events
if event == 'LeaveEvent':
# reset all the readouts
# TODO: reset the label text
return
if not self.sliceWidgetsPerStyle.has_key(observee):
return
interactor = observee.GetInteractor()
self.createChart(self.sliceWidgetsPerStyle[observee], interactor.GetEventPosition())
def createChart(self, sliceWidget, position):
self._multiVolumeIntensityChart.createChart(sliceWidget, position)
def setCurrentFrameNumber(self, frameNumber):
mvDisplayNode = self._bgMultiVolumeNode.GetDisplayNode()
mvDisplayNode.SetFrameComponent(frameNumber)
def setFramesEnabled(self, enabled):
pass
def refreshObservers(self):
""" When the layout changes, drop the observers from
all the old widgets and create new observers for the
newly created widgets"""
self.removeObservers()
# get new slice nodes
layoutManager = slicer.app.layoutManager()
sliceNodeCount = slicer.mrmlScene.GetNumberOfNodesByClass('vtkMRMLSliceNode')
for nodeIndex in xrange(sliceNodeCount):
# find the widget for each node in scene
sliceNode = slicer.mrmlScene.GetNthNodeByClass(nodeIndex, 'vtkMRMLSliceNode')
sliceWidget = layoutManager.sliceWidget(sliceNode.GetLayoutName())
if sliceWidget:
# add observers and keep track of tags
style = sliceWidget.sliceView().interactorStyle()
self.sliceWidgetsPerStyle[style] = sliceWidget
events = ("MouseMoveEvent", "EnterEvent", "LeaveEvent")
for event in events:
tag = style.AddObserver(event, self.processEvent)
self.styleObserverTags.append([style,tag])
def removeObservers(self):
for observee,tag in self.styleObserverTags:
observee.RemoveObserver(tag)
self.styleObserverTags = []
self.sliceWidgetsPerStyle = {}
def refreshFrameSlider(self):
self.frameSlider.minimum = 0
if not self._bgMultiVolumeNode:
self.frameSlider.maximum = 0
return
nFrames = self._bgMultiVolumeNode.GetNumberOfFrames()
self.frameSlider.maximum = nFrames - 1
def goToNext(self):
currentElement = self.frameSlider.value
currentElement += 1
if currentElement > self.frameSlider.maximum:
currentElement = 0
self.frameSlider.value = currentElement
def setupPlotSettingsFrame(self):
self.plotSettingsFrame = ctk.ctkCollapsibleButton()
self.plotSettingsFrame.text = "Plotting Settings"
self.plotSettingsFrame.collapsed = 1
plotSettingsFrameLayout = QFormLayout(self.plotSettingsFrame)
self.layout.addWidget(self.plotSettingsFrame)
# label map for probing
self.labelMapSelector = slicer.qMRMLNodeComboBox()
self.labelMapSelector.nodeTypes = ['vtkMRMLLabelMapVolumeNode']
self.labelMapSelector.toolTip = 'Label map to be probed'
self.labelMapSelector.setMRMLScene(slicer.mrmlScene)
self.labelMapSelector.addEnabled = 0
self.chartButton = QPushButton('Chart')
self.chartButton.setEnabled(False)
hbox = QHBoxLayout()
hbox.addWidget(QLabel('Probed label volume'))
hbox.addWidget(self.labelMapSelector)
hbox.addWidget(self.chartButton)
plotSettingsFrameLayout.addRow(hbox)
self.iCharting = QCheckBox('Interactive charting')
self.iCharting.setChecked(True)
plotSettingsFrameLayout.addRow(self.iCharting)
self.iChartingMode = QButtonGroup()
self.iChartingIntensity = QRadioButton('Signal intensity')
self.iChartingIntensityFixedAxes = QRadioButton('Fixed range intensity')
self.iChartingPercent = QRadioButton('Percentage change')
self.iChartingIntensity.setChecked(1)
self.iChartingMode.addButton(self.iChartingIntensity)
self.iChartingMode.addButton(self.iChartingIntensityFixedAxes)
self.iChartingMode.addButton(self.iChartingPercent)
hbox = QHBoxLayout()
self.plottingModeGroupBox = QGroupBox('Plotting mode:')
plottingModeLayout = QVBoxLayout()
self.plottingModeGroupBox.setLayout(plottingModeLayout)
plottingModeLayout.addWidget(self.iChartingIntensity)
plottingModeLayout.addWidget(self.iChartingIntensityFixedAxes)
plottingModeLayout.addWidget(self.iChartingPercent)
hbox.addWidget(self.plottingModeGroupBox)
self.showLegendCheckBox = QCheckBox('Display legend')
self.showLegendCheckBox.setChecked(0)
self.xLogScaleCheckBox = QCheckBox('Use log scale for X axis')
self.xLogScaleCheckBox.setChecked(0)
self.yLogScaleCheckBox = QCheckBox('Use log scale for Y axis')
self.yLogScaleCheckBox.setChecked(0)
self.plotGeneralSettingsGroupBox = QGroupBox('General Plot options:')
plotGeneralSettingsLayout = QVBoxLayout()
self.plotGeneralSettingsGroupBox.setLayout(plotGeneralSettingsLayout)
plotGeneralSettingsLayout.addWidget(self.showLegendCheckBox)
plotGeneralSettingsLayout.addWidget(self.xLogScaleCheckBox)
plotGeneralSettingsLayout.addWidget(self.yLogScaleCheckBox)
hbox.addWidget(self.plotGeneralSettingsGroupBox)
plotSettingsFrameLayout.addRow(hbox)
self.nFramesBaselineCalculation = QSpinBox()
self.nFramesBaselineCalculation.minimum = 1
hbox = QHBoxLayout()
hbox.addWidget(QLabel('Frame count(baseline calculation):'))
hbox.addWidget(self.nFramesBaselineCalculation)
plotSettingsFrameLayout.addRow(hbox)
def setupPanel(self, parentWidget):
logging.debug('ProstateTRUSNavUltrasound.setupPanel')
self.connectorNode = self.guideletParent.connectorNode
self.connectorNodeConnected = False
collapsibleButton = ctkCollapsibleButton()
collapsibleButton.setProperty('collapsedHeight', 20)
setButtonStyle(collapsibleButton, 2.0)
collapsibleButton.text = "Ultrasound"
parentWidget.addWidget(collapsibleButton)
ultrasoundLayout = QFormLayout(collapsibleButton)
ultrasoundLayout.setContentsMargins(12, 4, 4, 4)
ultrasoundLayout.setSpacing(4)
self.connectDisconnectButton = QPushButton("Connect")
self.connectDisconnectButton.setToolTip(
"If clicked, connection OpenIGTLink")
hbox = QHBoxLayout()
hbox.addWidget(self.connectDisconnectButton)
ultrasoundLayout.addRow(hbox)
self.setupIcons()
self.captureIDSelector = QComboBox()
self.captureIDSelector.setToolTip("Pick capture device ID")
self.captureIDSelector.setSizePolicy(QSizePolicy.Expanding,
QSizePolicy.Expanding)
self.volumeReconstructorIDSelector = QComboBox()
self.volumeReconstructorIDSelector.setToolTip(
"Pick volume reconstructor device ID")
self.volumeReconstructorIDSelector.setSizePolicy(
QSizePolicy.Expanding, QSizePolicy.Expanding)
self.startStopRecordingButton = QPushButton(" Start Recording")
self.startStopRecordingButton.setCheckable(True)
self.startStopRecordingButton.setIcon(self.recordIcon)
self.startStopRecordingButton.setEnabled(False)
self.startStopRecordingButton.setToolTip("If clicked, start recording")
self.startStopRecordingButton.setSizePolicy(QSizePolicy.Expanding,
QSizePolicy.Expanding)
recordParametersControlsLayout = QGridLayout()
self.filenameLabel = self.createLabel("Filename:", visible=False)
recordParametersControlsLayout.addWidget(self.filenameLabel, 1, 0)
# Offline Reconstruction
self.offlineReconstructButton = QPushButton(" Offline Reconstruction")
self.offlineReconstructButton.setCheckable(True)
self.offlineReconstructButton.setIcon(self.recordIcon)
self.offlineReconstructButton.setEnabled(False)
self.offlineReconstructButton.setToolTip(
"If clicked, reconstruct recorded volume")
self.offlineReconstructButton.setSizePolicy(QSizePolicy.Expanding,
QSizePolicy.Expanding)
self.offlineVolumeToReconstructSelector = QComboBox()
self.offlineVolumeToReconstructSelector.setEditable(True)
self.offlineVolumeToReconstructSelector.setToolTip(
"Pick/set volume to reconstruct")
self.offlineVolumeToReconstructSelector.visible = False
hbox = QHBoxLayout()
hbox.addWidget(self.startStopRecordingButton)
hbox.addWidget(self.offlineReconstructButton)
ultrasoundLayout.addRow(hbox)
# Scout scan (record and low resolution reconstruction) and live reconstruction
# Scout scan part
self.startStopScoutScanButton = QPushButton(
" Scout scan\n Start recording")
self.startStopScoutScanButton.setCheckable(True)
self.startStopScoutScanButton.setIcon(self.recordIcon)
self.startStopScoutScanButton.setToolTip("If clicked, start recording")
self.startStopScoutScanButton.setEnabled(False)
self.startStopScoutScanButton.setSizePolicy(QSizePolicy.Expanding,
QSizePolicy.Expanding)
self.startStopLiveReconstructionButton = QPushButton(
" Start live reconstruction")
self.startStopLiveReconstructionButton.setCheckable(True)
self.startStopLiveReconstructionButton.setIcon(self.recordIcon)
self.startStopLiveReconstructionButton.setToolTip(
"If clicked, start live reconstruction")
self.startStopLiveReconstructionButton.setEnabled(False)
self.startStopLiveReconstructionButton.setSizePolicy(
QSizePolicy.Expanding, QSizePolicy.Expanding)
self.displayRoiButton = QToolButton()
self.displayRoiButton.setCheckable(True)
self.displayRoiButton.setIcon(self.visibleOffIcon)
self.displayRoiButton.setToolTip("If clicked, display ROI")
hbox = QHBoxLayout()
hbox.addWidget(self.startStopScoutScanButton)
hbox.addWidget(self.startStopLiveReconstructionButton)
# hbox.addWidget(self.displayRoiButton)
ultrasoundLayout.addRow(hbox)
self.snapshotTimer = QTimer()
self.snapshotTimer.setSingleShot(True)
self.onParameterSetSelected()
return collapsibleButton
class ProstateTRUSNavWidget(GuideletWidget):
DEFAULT_PLUSSERVER_CHOOSER_TEXT = "Choose PlusServer.exe"
DEFAULT_CONFIGURATION_CHOOSER_TEXT = "Select Configuration"
def __init__(self, parent=None):
GuideletWidget.__init__(self, parent)
self.plusServerProcess = None
self.configurationFile = self.getSetting(
'ConfigurationFile', self.DEFAULT_CONFIGURATION_CHOOSER_TEXT)
self.serverExecutable = self.getSetting(
'PlusServer', self.DEFAULT_PLUSSERVER_CHOOSER_TEXT)
def cleanup(self):
GuideletWidget.cleanup(self)
if self.plusServerProcess:
self.plusServerProcess.terminate()
def setup(self):
showPlusServerWidget = True
if _platform == "linux" or _platform == "linux2" or _platform == "darwin": #linux or linux or OS X
message = "Attention: You are running Slicer on Linux or OS X. Do you have PlusServer installed on the current OS?"
result = QMessageBox.question(slicer.util.mainWindow(),
'ProstateTRUSNav', message,
QMessageBox.Yes | QMessageBox.No)
showPlusServerWidget = result == QMessageBox.Yes
if _platform == "win32" or showPlusServerWidget:
# Windows...
plusServerCollapsibleButton = ctkCollapsibleButton()
plusServerCollapsibleButton.text = "PlusServer"
self.layout.addWidget(plusServerCollapsibleButton)
self.configurationFileChooserButton = QPushButton(
self.configurationFile)
self.configurationFileChooserButton.connect(
'clicked()', self.onConfigFileSelected)
self.runPlusServerButton = QPushButton("Run PlusServer")
self.runPlusServerButton.setCheckable(True)
self.runPlusServerButton.connect('clicked()',
self.onRunPlusServerButtonClicked)
self.serverFormLayout = QFormLayout(plusServerCollapsibleButton)
self.serverExecutableChooserButton = QPushButton(
self.serverExecutable)
self.serverExecutableChooserButton.connect(
'clicked()', self.onServerExecutableSelected)
hbox = QHBoxLayout()
hbox.addWidget(self.serverExecutableChooserButton)
self.serverFormLayout.addRow(hbox)
hbox = QHBoxLayout()
hbox.addWidget(self.configurationFileChooserButton)
hbox.addWidget(self.runPlusServerButton)
self.serverFormLayout.addRow(hbox)
GuideletWidget.setup(self)
# do specific setup here
if _platform == "win32" or showPlusServerWidget:
self.launchGuideletButton.setEnabled(False)
self.checkExecutableAndArgument()
def checkExecutableAndArgument(self):
if os.path.exists(self.serverExecutable) and os.path.exists(
self.configurationFile):
self.runPlusServerButton.setEnabled(True)
else:
self.runPlusServerButton.setEnabled(False)
def getSetting(self, settingName, defaultValue=""):
settings = QSettings()
value = settings.value(self.moduleName + '/' + settingName,
defaultValue)
return value if value is not None and value != "" else defaultValue
def setSetting(self, settingName, value):
settings = QSettings()
settings.setValue(self.moduleName + '/' + settingName, value)
def addLauncherWidgets(self):
GuideletWidget.addLauncherWidgets(self)
# add launcher widget here
def onServerExecutableSelected(self):
executable = QFileDialog.getOpenFileName(self.parent,
"PlusServer Executable",
self.serverExecutable,
"*.exe")
if executable != "" and executable.find("PlusServer.exe"):
self.serverExecutable = executable
self.serverExecutableChooserButton.setText(executable)
self.setSetting("PlusServer", executable)
self.checkExecutableAndArgument()
def onConfigFileSelected(self):
self.configurationFile = QFileDialog.getOpenFileName(
self.parent, "Choose Configuration File", self.configurationFile,
"*.xml")
if self.configurationFile != "":
self.configurationFileChooserButton.setText(
os.path.split(self.configurationFile)[1])
self.setSetting("ConfigurationFile", self.configurationFile)
self.checkExecutableAndArgument()
def onRunPlusServerButtonClicked(self):
if self.runPlusServerButton.isChecked():
command = [
self.serverExecutable,
"--config-file=" + self.configurationFile
]
logging.info("Executing %s %s" % tuple(command))
self.plusServerProcess = Popen([
self.serverExecutable,
"--config-file=" + self.configurationFile
])
if self.plusServerProcess:
self.runPlusServerButton.setText("Quit Plus Server")
self.launchGuideletButton.setEnabled(True)
else:
if self.plusServerProcess:
self.plusServerProcess.terminate()
self.runPlusServerButton.setText("Run PlusServer")
self.launchGuideletButton.setEnabled(False)
def collectParameterList(self):
parameterList = GuideletWidget.collectParameterList(self)
if not parameterList:
parameterList = dict()
parameterList['OfflineVolumeToReconstruct'] = 0,
return parameterList
def createGuideletInstance(self, parameterList=None):
return ProstateTRUSNavGuidelet(None, self.guideletLogic, parameterList)
def createGuideletLogic(self):
return ProstateTRUSNavLogic()
class LoginDlg(QDialog):
"""login dialog for server"""
def __init__(self):
"""self.servers is a list of tuples containing server and last playername"""
QDialog.__init__(self, None)
decorateWindow(self, i18nc('kajongg', 'Login'))
self.setupUi()
localName = i18nc('kajongg name for local game server',
Query.localServerName)
self.servers = Query(
'select url,lastname from server order by lasttime desc').records
servers = list(x[0] for x in self.servers
if x[0] != Query.localServerName)
# the first server combobox item should be default: either the last used server
# or localName for autoPlay
if localName not in servers:
servers.append(localName)
if 'kajongg.org' not in servers:
servers.append('kajongg.org')
if Internal.autoPlay:
demoHost = Options.host or localName
if demoHost in servers:
servers.remove(
demoHost
) # we want a unique list, it will be re-used for all following games
servers.insert(0, demoHost)
# in this process but they will not be autoPlay
self.cbServer.addItems(servers)
self.passwords = Query(
'select url, p.name, passwords.password from passwords, player p '
'where passwords.player=p.id').records
Players.load()
self.cbServer.editTextChanged.connect(self.serverChanged)
self.cbUser.editTextChanged.connect(self.userChanged)
self.serverChanged()
StateSaver(self)
def returns(self, dummyButton=None):
"""login data returned by this dialog"""
return (Url(self.url), self.username, self.password,
self.__defineRuleset())
def setupUi(self):
"""create all Ui elements but do not fill them"""
self.buttonBox = KDialogButtonBox(self)
self.buttonBox.setStandardButtons(QDialogButtonBox.Cancel
| QDialogButtonBox.Ok)
# Ubuntu 11.10 unity is a bit strange - without this, it sets focus on
# the cancel button (which it shows on the left). I found no obvious
# way to use setDefault and setAutoDefault for fixing this.
self.buttonBox.button(QDialogButtonBox.Ok).setFocus(True)
self.buttonBox.accepted.connect(self.accept)
self.buttonBox.rejected.connect(self.reject)
vbox = QVBoxLayout(self)
self.grid = QFormLayout()
self.cbServer = QComboBox()
self.cbServer.setEditable(True)
self.grid.addRow(i18n('Game server:'), self.cbServer)
self.cbUser = QComboBox()
self.cbUser.setEditable(True)
self.grid.addRow(i18n('Username:'******'Password:'******'kajongg', 'Ruleset:'), self.cbRuleset)
vbox.addLayout(self.grid)
vbox.addWidget(self.buttonBox)
pol = QSizePolicy()
pol.setHorizontalPolicy(QSizePolicy.Expanding)
self.cbUser.setSizePolicy(pol)
self.__port = None
def serverChanged(self, dummyText=None):
"""the user selected a different server"""
records = Query(
'select player.name from player, passwords '
'where passwords.url=? and passwords.player = player.id',
(self.url, )).records
players = list(x[0] for x in records)
preferPlayer = Options.player
if preferPlayer:
if preferPlayer in players:
players.remove(preferPlayer)
players.insert(0, preferPlayer)
self.cbUser.clear()
self.cbUser.addItems(players)
if not self.cbUser.count():
user = KUser() if os.name == 'nt' else KUser(os.geteuid())
self.cbUser.addItem(user.fullName() or user.loginName())
if not preferPlayer:
userNames = [x[1] for x in self.servers if x[0] == self.url]
if userNames:
userIdx = self.cbUser.findText(userNames[0])
if userIdx >= 0:
self.cbUser.setCurrentIndex(userIdx)
showPW = bool(self.url) and not Url(self.url).isLocalHost
self.grid.labelForField(self.edPassword).setVisible(showPW)
self.edPassword.setVisible(showPW)
self.grid.labelForField(self.cbRuleset).setVisible(
not showPW and not Options.ruleset)
self.cbRuleset.setVisible(not showPW and not Options.ruleset)
if not showPW:
self.cbRuleset.clear()
if Options.ruleset:
self.cbRuleset.items = [Options.ruleset]
else:
self.cbRuleset.items = Ruleset.selectableRulesets(self.url)
self.buttonBox.button(QDialogButtonBox.Ok).setEnabled(bool(self.url))
def __defineRuleset(self):
"""find out what ruleset to use"""
if Options.ruleset:
return Options.ruleset
elif Internal.autoPlay or bool(Options.host):
return Ruleset.selectableRulesets()[0]
else:
return self.cbRuleset.current
def userChanged(self, text):
"""the username has been changed, lookup password"""
if text == '':
self.edPassword.clear()
return
passw = None
for entry in self.passwords:
if entry[0] == self.url and entry[1] == text:
passw = entry[2]
if passw:
self.edPassword.setText(passw)
else:
self.edPassword.clear()
@property
def url(self):
"""abstracts the url of the dialog"""
return english(self.cbServer.currentText())
@property
def username(self):
"""abstracts the username of the dialog"""
return self.cbUser.currentText()
@property
def password(self):
"""abstracts the password of the dialog"""
return self.edPassword.text()
@password.setter
def password(self, password):
"""abstracts the password of the dialog"""
self.edPassword.setText(password)
def setupPanel(self, parentWidget):
logging.debug('ProstateTRUSNavUltrasound.setupPanel')
self.connectorNode = self.guideletParent.connectorNode
self.connectorNodeConnected = False
collapsibleButton = ctkCollapsibleButton()
collapsibleButton.setProperty('collapsedHeight', 20)
setButtonStyle(collapsibleButton, 2.0)
collapsibleButton.text = "Ultrasound"
parentWidget.addWidget(collapsibleButton)
ultrasoundLayout = QFormLayout(collapsibleButton)
ultrasoundLayout.setContentsMargins(12,4,4,4)
ultrasoundLayout.setSpacing(4)
self.connectDisconnectButton = QPushButton("Connect")
self.connectDisconnectButton.setToolTip("If clicked, connection OpenIGTLink")
hbox = QHBoxLayout()
hbox.addWidget(self.connectDisconnectButton)
ultrasoundLayout.addRow(hbox)
self.setupIcons()
self.captureIDSelector = QComboBox()
self.captureIDSelector.setToolTip("Pick capture device ID")
self.captureIDSelector.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding)
self.volumeReconstructorIDSelector = QComboBox()
self.volumeReconstructorIDSelector.setToolTip( "Pick volume reconstructor device ID" )
self.volumeReconstructorIDSelector.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding)
self.startStopRecordingButton = QPushButton(" Start Recording")
self.startStopRecordingButton.setCheckable(True)
self.startStopRecordingButton.setIcon(self.recordIcon)
self.startStopRecordingButton.setEnabled(False)
self.startStopRecordingButton.setToolTip("If clicked, start recording")
self.startStopRecordingButton.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding)
recordParametersControlsLayout = QGridLayout()
self.filenameLabel = self.createLabel("Filename:", visible=False)
recordParametersControlsLayout.addWidget(self.filenameLabel, 1, 0)
# Offline Reconstruction
self.offlineReconstructButton = QPushButton(" Offline Reconstruction")
self.offlineReconstructButton.setCheckable(True)
self.offlineReconstructButton.setIcon(self.recordIcon)
self.offlineReconstructButton.setEnabled(False)
self.offlineReconstructButton.setToolTip("If clicked, reconstruct recorded volume")
self.offlineReconstructButton.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding)
self.offlineVolumeToReconstructSelector = QComboBox()
self.offlineVolumeToReconstructSelector.setEditable(True)
self.offlineVolumeToReconstructSelector.setToolTip( "Pick/set volume to reconstruct" )
self.offlineVolumeToReconstructSelector.visible = False
hbox = QHBoxLayout()
hbox.addWidget(self.startStopRecordingButton)
hbox.addWidget(self.offlineReconstructButton)
ultrasoundLayout.addRow(hbox)
# Scout scan (record and low resolution reconstruction) and live reconstruction
# Scout scan part
self.startStopScoutScanButton = QPushButton(" Scout scan\n Start recording")
self.startStopScoutScanButton.setCheckable(True)
self.startStopScoutScanButton.setIcon(self.recordIcon)
self.startStopScoutScanButton.setToolTip("If clicked, start recording")
self.startStopScoutScanButton.setEnabled(False)
self.startStopScoutScanButton.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding)
self.startStopLiveReconstructionButton = QPushButton(" Start live reconstruction")
self.startStopLiveReconstructionButton.setCheckable(True)
self.startStopLiveReconstructionButton.setIcon(self.recordIcon)
self.startStopLiveReconstructionButton.setToolTip("If clicked, start live reconstruction")
self.startStopLiveReconstructionButton.setEnabled(False)
self.startStopLiveReconstructionButton.setSizePolicy(QSizePolicy.Expanding, QSizePolicy.Expanding)
self.displayRoiButton = QToolButton()
self.displayRoiButton.setCheckable(True)
self.displayRoiButton.setIcon(self.visibleOffIcon)
self.displayRoiButton.setToolTip("If clicked, display ROI")
hbox = QHBoxLayout()
hbox.addWidget(self.startStopScoutScanButton)
hbox.addWidget(self.startStopLiveReconstructionButton)
# hbox.addWidget(self.displayRoiButton)
ultrasoundLayout.addRow(hbox)
self.snapshotTimer = QTimer()
self.snapshotTimer.setSingleShot(True)
self.onParameterSetSelected()
return collapsibleButton
class ProstateTRUSNavWidget(GuideletWidget):
DEFAULT_PLUSSERVER_CHOOSER_TEXT = "Choose PlusServer.exe"
DEFAULT_CONFIGURATION_CHOOSER_TEXT = "Select Configuration"
def __init__(self, parent = None):
GuideletWidget.__init__(self, parent)
self.plusServerProcess = None
self.configurationFile = self.getSetting('ConfigurationFile', self.DEFAULT_CONFIGURATION_CHOOSER_TEXT)
self.serverExecutable = self.getSetting('PlusServer', self.DEFAULT_PLUSSERVER_CHOOSER_TEXT)
def cleanup(self):
GuideletWidget.cleanup(self)
if self.plusServerProcess:
self.plusServerProcess.terminate()
def setup(self):
showPlusServerWidget = True
if _platform == "linux" or _platform == "linux2" or _platform == "darwin": #linux or linux or OS X
message = "Attention: You are running Slicer on Linux or OS X. Do you have PlusServer installed on the current OS?"
result = QMessageBox.question(slicer.util.mainWindow(), 'ProstateTRUSNav', message,
QMessageBox.Yes | QMessageBox.No)
showPlusServerWidget = result == QMessageBox.Yes
if _platform == "win32" or showPlusServerWidget:
# Windows...
plusServerCollapsibleButton = ctkCollapsibleButton()
plusServerCollapsibleButton.text = "PlusServer"
self.layout.addWidget(plusServerCollapsibleButton)
self.configurationFileChooserButton = QPushButton(self.configurationFile)
self.configurationFileChooserButton.connect('clicked()', self.onConfigFileSelected)
self.runPlusServerButton = QPushButton("Run PlusServer")
self.runPlusServerButton.setCheckable(True)
self.runPlusServerButton.connect('clicked()', self.onRunPlusServerButtonClicked)
self.serverFormLayout = QFormLayout(plusServerCollapsibleButton)
self.serverExecutableChooserButton = QPushButton(self.serverExecutable)
self.serverExecutableChooserButton.connect('clicked()', self.onServerExecutableSelected)
hbox = QHBoxLayout()
hbox.addWidget(self.serverExecutableChooserButton)
self.serverFormLayout.addRow(hbox)
hbox = QHBoxLayout()
hbox.addWidget(self.configurationFileChooserButton)
hbox.addWidget(self.runPlusServerButton)
self.serverFormLayout.addRow(hbox)
GuideletWidget.setup(self)
# do specific setup here
if _platform == "win32" or showPlusServerWidget:
self.launchGuideletButton.setEnabled(False)
self.checkExecutableAndArgument()
def checkExecutableAndArgument(self):
if os.path.exists(self.serverExecutable) and os.path.exists(self.configurationFile):
self.runPlusServerButton.setEnabled(True)
else:
self.runPlusServerButton.setEnabled(False)
def getSetting(self, settingName, defaultValue=""):
settings = QSettings()
value = settings.value(self.moduleName + '/' + settingName, defaultValue)
return value if value is not None and value != "" else defaultValue
def setSetting(self, settingName, value):
settings = QSettings()
settings.setValue(self.moduleName + '/'+ settingName, value)
def addLauncherWidgets(self):
GuideletWidget.addLauncherWidgets(self)
# add launcher widget here
def onServerExecutableSelected(self):
executable = QFileDialog.getOpenFileName(self.parent, "PlusServer Executable",
self.serverExecutable, "*.exe")
if executable != "" and executable.find("PlusServer.exe"):
self.serverExecutable = executable
self.serverExecutableChooserButton.setText(executable)
self.setSetting("PlusServer", executable)
self.checkExecutableAndArgument()
def onConfigFileSelected(self):
self.configurationFile = QFileDialog.getOpenFileName(self.parent, "Choose Configuration File",
self.configurationFile, "*.xml")
if self.configurationFile != "":
self.configurationFileChooserButton.setText(os.path.split(self.configurationFile)[1])
self.setSetting("ConfigurationFile", self.configurationFile)
self.checkExecutableAndArgument()
def onRunPlusServerButtonClicked(self):
if self.runPlusServerButton.isChecked():
command = [self.serverExecutable, "--config-file="+self.configurationFile]
logging.info("Executing %s %s" % tuple(command))
self.plusServerProcess = Popen([self.serverExecutable, "--config-file="+self.configurationFile])
if self.plusServerProcess:
self.runPlusServerButton.setText("Quit Plus Server")
self.launchGuideletButton.setEnabled(True)
else:
if self.plusServerProcess:
self.plusServerProcess.terminate()
self.runPlusServerButton.setText("Run PlusServer")
self.launchGuideletButton.setEnabled(False)
def collectParameterList(self):
parameterList = GuideletWidget.collectParameterList(self)
if not parameterList:
parameterList = dict()
parameterList['OfflineVolumeToReconstruct'] = 0,
return parameterList
def createGuideletInstance(self, parameterList = None):
return ProstateTRUSNavGuidelet(None, self.guideletLogic, parameterList)
def createGuideletLogic(self):
return ProstateTRUSNavLogic()