def test_last_update_time_set(self):
"""We don't see a LastUpdateTime for naiive elements"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
obj.set_update_time()
tested = obj_to_doc(obj)
self.assertEqual("ItemData", tested.tag)
self.assertIsNotNone(tested.get('mdsol:LastUpdateTime'))
def test_last_update_time_set(self):
"""We don't see a LastUpdateTime for naiive elements"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
obj.set_update_time()
tested = obj_to_doc(obj)
self.assertEqual("ItemData", tested.tag)
self.assertIsNotNone(tested.get('mdsol:LastUpdateTime'))
def test_add_milestone(self):
"""We add a single milestone"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
obj.add_milestone("Informed Consent")
tested = obj_to_doc(obj)
self.assertEqual('Annotation', list(tested)[0].tag)
annotation = list(tested)[0]
self.assertEqual('Informed Consent', list(list(annotation)[0])[0].text)
def test_add_last_update_time(self):
"""We add a LastUpdateTime"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
now = datetime.datetime.utcnow()
obj.last_update_time = now
tested = obj_to_doc(obj)
self.assertEqual("ItemData", tested.tag)
self.assertEqual(now.isoformat(), tested.get('mdsol:LastUpdateTime'))
def test_modm_bool_attribute(self):
"""A boolean gets mapped to Yes or No"""
data = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
data.add_attribute("IsSDVRequired", True)
data.add_attribute("IsSDVComplete", False)
tested = obj_to_doc(data)
self.assertEqual(tested.get("mdsol:IsSDVRequired"), "Yes")
self.assertEqual(tested.get("mdsol:IsSDVComplete"), "No")
def test_gate_modm_attributes(self):
"""We add a mdsol:Nonsense"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
now = datetime.datetime.utcnow()
obj.last_update_time = now
with self.assertRaises(ValueError) as exc:
obj.add_attribute("Nonsense", "85D4F9F0-9F49-42F3-A8E7-413DE85CC55E")
self.assertEqual("Can't add Nonsense to ItemData", str(exc.exception))
def test_add_milestone(self):
"""We add a single milestone"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
obj.add_milestone("Informed Consent")
tested = obj_to_doc(obj)
self.assertEqual('Annotation', list(tested)[0].tag)
annotation = list(tested)[0]
self.assertEqual('Informed Consent', list(list(annotation)[0])[0].text)
def test_add_last_update_time(self):
"""We add a LastUpdateTime"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
now = datetime.datetime.utcnow()
obj.last_update_time = now
tested = obj_to_doc(obj)
self.assertEqual("ItemData", tested.tag)
self.assertEqual(now.isoformat(), tested.get('mdsol:LastUpdateTime'))
def test_gate_modm_attributes(self):
"""We add a mdsol:Nonsense"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
now = datetime.datetime.utcnow()
obj.last_update_time = now
with self.assertRaises(ValueError) as exc:
obj.add_attribute("Nonsense",
"85D4F9F0-9F49-42F3-A8E7-413DE85CC55E")
self.assertEqual("Can't add Nonsense to ItemData", str(exc.exception))
def test_add_item_uuid(self):
"""We add a mdsol:ItemUUID"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
now = datetime.datetime.utcnow()
obj.last_update_time = now
obj.add_attribute("ItemUUID", "85D4F9F0-9F49-42F3-A8E7-413DE85CC55E")
tested = obj_to_doc(obj)
self.assertEqual("ItemData", tested.tag)
self.assertEqual(now.isoformat(), tested.get('mdsol:LastUpdateTime'))
self.assertEqual("85D4F9F0-9F49-42F3-A8E7-413DE85CC55E", tested.get('mdsol:ItemUUID'))
def test_add_item_uuid(self):
"""We add a mdsol:ItemUUID"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
now = datetime.datetime.utcnow()
obj.last_update_time = now
obj.add_attribute("ItemUUID", "85D4F9F0-9F49-42F3-A8E7-413DE85CC55E")
tested = obj_to_doc(obj)
self.assertEqual("ItemData", tested.tag)
self.assertEqual(now.isoformat(), tested.get('mdsol:LastUpdateTime'))
self.assertEqual("85D4F9F0-9F49-42F3-A8E7-413DE85CC55E",
tested.get('mdsol:ItemUUID'))
def test_modm_attributes(self):
"""Each modm attribute is settable"""
for attribute in ["ItemUUID",
"SDRCompleteDate", "SDVCompleteDate", "LockCompleteDate",
"IsSDVRequired", "IsSDVComplete"]:
data = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
if "UUID" in attribute:
data.add_attribute(attribute, uuid.uuid4())
elif "Date" in attribute:
data.add_attribute(attribute, fake.date_time_this_year(before_now=True,
after_now=False,
tzinfo=None))
elif attribute.startswith('Is'):
data.add_attribute(attribute, random.choice(YesNoRave))
else:
data.add_attribute(attribute, "Blargle")
tested = obj_to_doc(data)
self.assertIsNotNone(tested.get("mdsol:{}".format(attribute)))
def test_invalid_modm_attributes(self):
"""Each invalid modm attribute raises an exception"""
for attribute in ["StudyUUID"]:
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
with self.assertRaises(ValueError) as exc:
if "UUID" in attribute:
obj.add_attribute(attribute, uuid.uuid4())
elif "Date" in attribute:
obj.add_attribute(attribute, fake.date_time_this_year(before_now=True,
after_now=False,
tzinfo=None))
else:
obj.add_attribute(attribute, "Blargle")
self.assertEqual("Can't add {} to ItemData".format(attribute), str(exc.exception))
def test_gate_modm_milestones_global(self):
"""We add a mdsol:Nonsense"""
igp = ItemGroupData("LOG_LINE")
brth = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
brth.add_milestone("Birth Date")
igp << brth
ifc = ItemData(itemoid="DSSTDAT_IFC", value="12 DEC 1975")
ifc.add_milestone("Informed Consent")
igp << ifc
tested = obj_to_doc(igp)
self.assertEqual('ItemGroupData', tested.tag)
self.assertEqual('ItemData', list(tested)[0].tag)
idata_zero = list(tested)[0]
self.assertEqual('Annotation', list(idata_zero)[0].tag)
anno = list(idata_zero)[0]
self.assertEqual(1, len(list(anno)))
def test_add_last_update_time_with_invalid_time(self):
"""We add a LastUpdateTime with a nonsense value"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
now = "2017-04-21"
with self.assertRaises(ValueError) as exc:
obj.last_update_time = now
def test_add_last_update_time_with_invalid_time(self):
"""We add a LastUpdateTime with a nonsense value"""
obj = ItemData(itemoid="BRTHDAT", value="12 DEC 1975")
now = "2017-04-21"
with self.assertRaises(ValueError) as exc:
obj.last_update_time = now