def setGeneralInformation(self, aString):
m = GENERAL_INFORMATION_PATTERN.match(aString)
if m:
self.seqlHeader_raw = m.group('seqlHeader_raw')
self.seqlHeader = safeStrip(self.seqlHeader_raw)
self.applicant_raw = m.group('applicant_raw')
self.applicant_val = m.group('applicant')
applicantLines = self.applicant_val.splitlines()
self.applicant = [
a.strip() for a in applicantLines if a.strip() != ''
]
self.title_raw = m.group('title_raw')
self.title = su.inOneLine(safeStrip(m.group('title')))
self.reference_raw = m.group('reference_raw')
self.reference = safeStrip(m.group('reference'))
self.applicationNumber_raw = m.group('applicationNumber_raw')
self.applicationNumber = safeStrip(m.group('applicationNumber'))
self.filingDate = safeStrip(m.group('filingDate'))
self.filingDate_raw = m.group('filingDate_raw')
self.priorities_raw = m.group('priorities_raw')
self.priorities = su.parsePriorities(self.priorities_raw)
self.quantity_raw = m.group('quantity_raw')
self.quantity = safeStrip(m.group('quantity'))
self.software_raw = m.group('software_raw')
self.software = safeStrip(m.group('software'))
self.isSeql = True
else:
print 'File', self.filePath
print 'SequenceListing: No match for general information pattern.'
def __init__(self, inStr):
self.genInfoPatternFound = False
self.applicant = []
self.title = '-'
self.reference = '-'
self.applicationNumber = '-'
self.filingDate = '-'
self.priority = [] # a list of tuples (applNumber, filingDate)
self.quantity = 0
self.software = '-'
m = generalInformationPattern.match(inStr)
if m:
applicantLines = m.group('applicant').splitlines()
self.applicant = [a.strip() for a in applicantLines if a.strip() != '']
self.title = su.inOneLine(safeStrip(m.group('title')))
self.reference = safeStrip(m.group('reference'))
self.applicationNumber = safeStrip(m.group('applicationNumber'))
self.filingDate = safeStrip(m.group('filingDate'))
pg = m.group('priority')
# if pg.endswith('<'):
# pg = pg[:1]
# print 'pg'
# print pg
if pg:
self.priority = self.parsePriority(safeStrip(pg[:-1]))
self.quantity = safeStrip(m.group('quantity'))
self.software = safeStrip(m.group('software'))
self.genInfoPatternFound = True
def __init__(self, inStr):
self.genInfoPatternFound = False
self.seqlHeader = '-'
self.applicant = []
self.title = '-'
self.reference = '-'
self.applicationNumber = '-'
self.filingDate = '-'
self.priority = [] # a list of tuples (applNumber, filingDate)
self.quantity = 0
self.software = '-'
m = generalInformationPattern.match(inStr)
if m:
self.seqlHeader = safeStrip(m.group('header'))
applicantLines = m.group('applicant').splitlines()
self.applicant = [a.strip() for a in applicantLines if a.strip() != '']
self.title = su.inOneLine(safeStrip(m.group('title')))
self.reference = safeStrip(m.group('reference'))
self.applicationNumber = safeStrip(m.group('applicationNumber'))
self.filingDate = safeStrip(m.group('filingDate'))
pg = m.group('priority')
# if pg.endswith('<'):
# pg = pg[:1]
# print 'pg'
# print pg
if pg:
self.priority = self.parsePriorities(safeStrip(pg[:-1]))
self.quantity = safeStrip(m.group('quantity'))
self.software = safeStrip(m.group('software'))
self.genInfoPatternFound = True
def setGeneralInformation(self, aString):
m = GENERAL_INFORMATION_PATTERN.match(aString)
if m:
self.seqlHeader_raw = m.group('seqlHeader_raw')
self.seqlHeader = safeStrip(self.seqlHeader_raw)
self.applicant_raw = m.group('applicant_raw')
self.applicant_val = m.group('applicant')
applicantLines = self.applicant_val.splitlines()
self.applicant = [a.strip() for a in applicantLines if a.strip() != '']
self.title_raw = m.group('title_raw')
self.title = su.inOneLine(safeStrip(m.group('title')))
self.reference_raw = m.group('reference_raw')
self.reference = safeStrip(m.group('reference'))
self.applicationNumber_raw = m.group('applicationNumber_raw')
self.applicationNumber = safeStrip(m.group('applicationNumber'))
self.filingDate = safeStrip(m.group('filingDate'))
self.filingDate_raw = m.group('filingDate_raw')
self.priorities_raw = m.group('priorities_raw')
self.priorities = su.parsePriorities(self.priorities_raw)
self.quantity_raw = m.group('quantity_raw')
self.quantity = safeStrip(m.group('quantity'))
self.software_raw = m.group('software_raw')
self.software = safeStrip(m.group('software'))
self.isSeql = True
else:
print 'File', self.filePath
print 'SequenceListing: No match for general information pattern.'
def __init__(self, fm):
self.featureHeader_raw = fm.group('featureHeader_raw')
self.featureHeader = safeStrip(fm.group('featureHeader'))
self.key_raw = fm.group('key_raw')
self.key = safeStrip(fm.group('key'))
self.location_raw = fm.group('location_raw')
self.location = safeStrip(fm.group('location'))
self.description_raw = fm.group('description_raw')
self.description = su.inOneLine(safeStrip(fm.group('description')))
self.translation = su.DEFAULT_STRING
def __init__(self, fm):
self.featureHeader_raw = fm.group('featureHeader_raw')
self.featureHeader = safeStrip(fm.group('featureHeader'))
self.key_raw = fm.group('key_raw')
self.key = safeStrip(fm.group('key'))
self.location_raw = fm.group('location_raw')
self.location = safeStrip(fm.group('location'))
self.description_raw = fm.group('description_raw')
self.description = su.inOneLine(safeStrip(fm.group('description')))
self.translation = su.DEFAULT_STRING
def __init__(self, m):
# print '\tf inStr xx%sxx' %inStr
# TODO: code needed for 220 missing
self.featureHeader = '-'
self.key = '-'
self.location = '-'
self.description = '-'
self.featureHeader = safeStrip(m.group('featureHeader'))
if m.group('key'):
self.key = safeStrip(m.group('key'))
if m.group('location'):
self.location = safeStrip(m.group('location'))
if m.group('description'):
self.description = safeStrip(m.group('description'))
if self.description:
self.description = su.inOneLine(self.description)
def __init__(self, m):
# print '\tf inStr xx%sxx' %inStr
# TODO: code needed for 220 missing
self.featureHeader = '-'
self.key = '-'
self.location = '-'
self.description = su.DEFAULT_STRING
self.translation = su.DEFAULT_STRING
self.featureHeader = safeStrip(m.group('featureHeader'))
if m.group('key'):
self.key = safeStrip(m.group('key'))
if m.group('location'):
self.location = safeStrip(m.group('location'))
if m.group('description'):
self.description = safeStrip(m.group('description'))
if self.description:
self.description = su.inOneLine(self.description)
