def test_ignore_strand_sample_split(testdir, mock_testclass):
split = 'POLR2A-100-110'
bed = split + '.bed'
forcov = split + '-forcov.bed'
igs.ignore_strand = MagicMock()
igs.ignore_strand_sample(split)
igs.ignore_strand.assert_called_once_with(bed, forcov)
def test_ignore_strand_sample(testdir, mock_testclass):
sample = 'POLR2A'
bed = sample + '.bed'
forcov = sample + '-forcov.bed'
igs.ignore_strand = MagicMock()
igs.ignore_strand_sample(sample)
igs.ignore_strand.assert_called_once_with(bed, forcov)
def test_ignore_strand_sample_parameters(testdir, mock_testclass):
sample = 'POLR2A'
input_suffix = '-input'
output_suffix = '-output'
bed = sample + input_suffix + '.bed'
forcov = sample + output_suffix + '.bed'
igs.ignore_strand = MagicMock()
igs.ignore_strand_sample(sample, input_suffix, output_suffix)
igs.ignore_strand.assert_called_once_with(bed, forcov)