def mk_su_set_filter(su_set_f):
html = mk_su_names_filter(su_set_f.su_names_f, 'subunit composition')
html += sh.mk_select('su_set_option',
su_set_f.options,
su_set_f.opt_to_label,
selected_set=sf.to_set(su_set_f.option))
html += '</td>\n</tr></table></font>\n'
return html
def __init__(self, aac_col, ref_aac): #set up scores and their dependent variables: self.prob, self.all_shen, self.spl_shen, self.sm, self.sd, = 0, 0, 0, 0, 0 self.norm_p_val, self.shen_score, self.prob_score = 0, 0, 0 self.aac_col, self.ref_aac = aac_col, ref_aac self.aac_names = sorted(sf.to_set(aac_col)) self.all_aac_to_fract = self.mk_fractions(aac_col)[1] self.set_aac_order() self.spl_aac_to_num, self.spl_aac_to_fract = dict(), dict() self.aac_to_diff = dict()
def mk_su_names_filter(su_names_f, label):
uf, f_name = su_names_f.use_filter, su_names_f.f_name
html = mk_filter_cell(uf, f_name, label) + '<tr><td>'
html += sh.mk_select(f_name,
su_names_f.su_names,
is_mult=True,
size=4,
selected_set=sf.to_set(su_names_f.chosen_names))
html += '</td>\n</tr></table></font>\n'
return html
def mk_action_select(col_name):
# changing actions change them in js actChanged too!
val_list = ['none', 'edit', 'from_field', 'delete']
val_to_label = {
'none': 'no action',
'edit': 'edit',
'from_field': 'fill from field above',
'delete': 'delete'
}
jscr = ' onchange = "actChanged(this, \'' + col_name + '\')"'
act_sel = sh.mk_select(get_act_field_name(col_name),
val_list,
val_to_label,
js=jscr,
selected_set=sf.to_set('none'))
return act_sel
def get_chosen_su_names(post_data, filter_name):
return sf.to_set(post_data.getvalue(filter_name, []))
def _set_ranks(self, chosen_ranks):
self.chosen_ranks = sf.to_set(chosen_ranks) & self.ranks
def __init__(self, su_names_f, post_data):
self.su_names_f = su_names_f
self.use_filter = su_names_f.use_filter
self.su_names_set = sf.to_set(su_names_f.su_names)
self.chosen_su_set = set(su_names_f.chosen_names)
self.option = fh.get_su_set_option(post_data)
def get_split_source_field(self):
sel_set = {'current_split':'current split ids',
'su_pos_aac':'specified aminoacid',
'filters':'filters'}
return sh.mk_select('split_source', list(sel_set.keys()), sel_set,
selected_set = sf.to_set('current_split'))
def get_show_mode_field(self):
show_modes = {'True':'blocks and spacers', 'False':'sequence'}
return sh.mk_select('show_mode', ['True', 'False'], show_modes,
selected_set = sf.to_set(str(self.show_blocks)))