def test_roundtrip_rna(self):
with io.StringIO() as fh:
_rna_to_genbank(_genbank_to_rna(self.single_rna_fp), fh)
obs = fh.getvalue()
with open(self.single_rna_fp) as fh:
exp = fh.read()
self.assertEqual(obs, exp)
def test_roundtrip_rna(self):
with io.StringIO() as fh:
_rna_to_genbank(_genbank_to_rna(self.single_rna_fp), fh)
obs = fh.getvalue()
with open(self.single_rna_fp) as fh:
exp = fh.read()
self.assertEqual(obs, exp)
def test_rna_to_genbank(self):
with io.StringIO() as fh:
seq, md, imd, constructor = self.single_rna
obj = constructor(seq, md, interval_metadata=imd, lowercase=True)
_rna_to_genbank(obj, fh)
obs = fh.getvalue()
with open(self.single_rna_fp) as fh:
exp = fh.read()
self.assertEqual(obs, exp)
def test_rna_to_genbank(self):
with io.StringIO() as fh:
seq, md, imd, constructor = self.single_rna
obj = constructor(seq, md, interval_metadata=imd, lowercase=True)
_rna_to_genbank(obj, fh)
obs = fh.getvalue()
with open(self.single_rna_fp) as fh:
exp = fh.read()
self.assertEqual(obs, exp)
def test_rna_to_genbank(self):
fh = io.StringIO()
seq, md, pmd, constructor = self.single_rna
obj = constructor(seq, md, pmd, lowercase=True)
_rna_to_genbank(obj, fh)
obs = fh.getvalue()
fh.close()
with io.open(self.single_rna_fp) as fh:
exp = fh.read()
self.assertEqual(obs, exp)
def test_rna_to_genbank(self):
fh = io.StringIO()
seq, md, pmd, constructor = self.single_rna
obj = constructor(seq, md, pmd, lowercase=True)
_rna_to_genbank(obj, fh)
obs = fh.getvalue()
fh.close()
with io.open(self.single_rna_fp) as fh:
exp = fh.read()
self.assertEqual(obs, exp)