def __init__(self, args=None, feature_config=None):
if args is None:
args = DEFAULT_PARSER_ARGS.copy()
if feature_config is None:
self.feature_config = FEATURE_CONFIG.copy()
model_file = args['save_dir'] + '/' + args['save_name'] if args['save_name'] is not None \
else '{}/{}_parser.pt'.format(args['save_dir'], args['shorthand'])
# load pretrain; note that we allow the pretrain_file to be non-existent
pretrain_file = '{}/{}.pretrain.pt'.format(args['save_dir'],
args['shorthand'])
self.pretrain = Pretrain(pretrain_file)
# load model
print("Loading model from: {}".format(model_file))
use_cuda = args['cuda'] and not args['cpu']
self.trainer = Trainer(pretrain=self.pretrain,
model_file=model_file,
use_cuda=use_cuda)
self.loaded_args, self.vocab = self.trainer.args, self.trainer.vocab
self.batch_size = args['batch_size']
# load config
for k in args:
if k.endswith('_dir') or k.endswith('_file') or k in [
'shorthand'
] or k == 'mode':
self.loaded_args[k] = args[k]
def _set_up_model(self, config, use_gpu):
# get pretrained word vectors
self._pretrain = Pretrain(config['pretrain_path'])
# set up trainer
self._trainer = Trainer(pretrain=self.pretrain,
model_file=config['model_path'],
use_cuda=use_gpu)
def _set_up_model(self, config, use_gpu):
# get pretrained word vectors
self._pretrain = Pretrain(
config['pretrain_path']) if 'pretrain_path' in config else None
# set up trainer
self._trainer = Trainer(pretrain=self.pretrain,
model_file=config['model_path'],
use_cuda=use_gpu)
self._tqdm = 'tqdm' in config and config['tqdm']
def _set_up_model(self, config, use_gpu):
# get pretrained word vectors
self._pretrain = Pretrain(
config['pretrain_path']) if 'pretrain_path' in config else None
self._n_pred = config['n_pred'] if 'n_pred' in config else 1
# set up trainer
self._trainer = Trainer(pretrain=self.pretrain,
model_file=config['model_path'],
use_cuda=use_gpu,
n_pred=self._n_pred)
def evaluate(args):
# file paths
system_pred_file = args['output_file']
gold_file = args['gold_file']
model_file = args['save_dir'] + '/' + args['save_name'] if args['save_name'] is not None \
else '{}/{}_tagger.pt'.format(args['save_dir'], args['shorthand'])
# load pretrain; note that we allow the pretrain_file to be non-existent
pretrain_file = '{}/{}.pretrain.pt'.format(args['save_dir'],
args['shorthand'])
pretrain = Pretrain(pretrain_file)
# load model
print("Loading model from: {}".format(model_file))
use_cuda = args['cuda'] and not args['cpu']
trainer = Trainer(pretrain=pretrain,
model_file=model_file,
use_cuda=use_cuda)
loaded_args, vocab = trainer.args, trainer.vocab
# load config
for k in args:
if k.endswith('_dir') or k.endswith('_file') or k in ['shorthand'
] or k == 'mode':
loaded_args[k] = args[k]
# load data
print("Loading data with batch size {}...".format(args['batch_size']))
doc = Document(CoNLL.conll2dict(input_file=args['eval_file']))
batch = DataLoader(doc,
args['batch_size'],
loaded_args,
pretrain,
vocab=vocab,
evaluation=True,
sort_during_eval=True)
if len(batch) > 0:
print("Start evaluation...")
preds = []
for i, b in enumerate(batch):
preds += trainer.predict(b)
else:
# skip eval if dev data does not exist
preds = []
preds = utils.unsort(preds, batch.data_orig_idx)
# write to file and score
batch.doc.set([UPOS, XPOS, FEATS], [y for x in preds for y in x])
CoNLL.dict2conll(batch.doc.to_dict(), system_pred_file)
if gold_file is not None:
_, _, score = scorer.score(system_pred_file, gold_file)
print("Tagger score:")
print("{} {:.2f}".format(args['shorthand'], score * 100))
def _set_up_model(self, config, use_gpu):
# get pretrained word vectors
self._pretrain = Pretrain(config['pretrain_path'])
# set up model
self._model = cnn_classifier.load(filename=config['model_path'],
pretrain=self._pretrain)
self._batch_size = config.get('batch_size', None)
# TODO: move this call to load()
if use_gpu:
self._model.cuda()
def load_pretrain(args):
pretrain = None
if args['pretrain']:
if args['wordvec_pretrain_file']:
pretrain_file = args['wordvec_pretrain_file']
else:
pretrain_file = '{}/{}.pretrain.pt'.format(args['save_dir'], args['shorthand'])
if os.path.exists(pretrain_file):
vec_file = None
else:
vec_file = args['wordvec_file'] if args['wordvec_file'] else utils.get_wordvec_file(args['wordvec_dir'], args['shorthand'])
pretrain = Pretrain(pretrain_file, vec_file, args['pretrain_max_vocab'])
return pretrain
def _set_up_model(self, config, use_gpu):
self._pretrain = Pretrain(
config['pretrain_path']) if 'pretrain_path' in config else None
n_parses = config['n_parses'] if 'n_parses' in config else 3
kalm_shuffle = config[
'kalm_shuffle'] if 'kalm_shuffle' in config else False
automatic_n_parses = config[
'automatic_n_parses'] if 'automatic_n_parses' in config else False
self._trainer = Trainer(pretrain=self.pretrain,
model_file=config['model_path'],
use_cuda=use_gpu,
n_parses=n_parses,
kalm_shuffle=kalm_shuffle,
automatic_n_parses=automatic_n_parses)
def _set_up_model(self, config, use_gpu):
# get pretrained word vectors
pretrain_path = config.get('pretrain_path', None)
self._pretrain = Pretrain(pretrain_path) if pretrain_path else None
# set up model
charlm_forward_file = config.get('forward_charlm_path', None)
charlm_backward_file = config.get('backward_charlm_path', None)
self._model = trainer.Trainer.load(
filename=config['model_path'],
pt=self._pretrain,
forward_charlm=trainer.load_charlm(charlm_forward_file),
backward_charlm=trainer.load_charlm(charlm_backward_file),
use_gpu=use_gpu)
# batch size counted as sentences
self._batch_size = config.get('batch_size',
ConstituencyProcessor.DEFAULT_BATCH_SIZE)
def _set_up_model(self, config, use_gpu):
# get pretrained word vectors
pretrain_path = config.get('pretrain_path', None)
self._pretrain = Pretrain(pretrain_path) if pretrain_path else None
forward_charlm_path = config.get('forward_charlm_path', None)
charmodel_forward = CharacterLanguageModel.load(forward_charlm_path, finetune=False) if forward_charlm_path else None
backward_charlm_path = config.get('backward_charlm_path', None)
charmodel_backward = CharacterLanguageModel.load(backward_charlm_path, finetune=False) if backward_charlm_path else None
# set up model
self._model = cnn_classifier.load(filename=config['model_path'],
pretrain=self._pretrain,
charmodel_forward=charmodel_forward,
charmodel_backward=charmodel_backward)
# batch size counted as words
self._batch_size = config.get('batch_size', SentimentProcessor.DEFAULT_BATCH_SIZE)
# TODO: move this call to load()
if use_gpu:
self._model.cuda()
def load_pretrain(args):
if args.wordvec_pretrain_file:
pretrain_file = args.wordvec_pretrain_file
elif args.wordvec_type:
pretrain_file = '{}/{}.{}.pretrain.pt'.format(
args.save_dir, args.shorthand, args.wordvec_type.name.lower())
else:
raise Exception(
"TODO: need to get the wv type back from get_wordvec_file")
logger.info("Looking for pretrained vectors in {}".format(pretrain_file))
if os.path.exists(pretrain_file):
vec_file = None
elif args.wordvec_raw_file:
vec_file = args.wordvec_raw_file
logger.info("Pretrain not found. Looking in {}".format(vec_file))
else:
vec_file = utils.get_wordvec_file(args.wordvec_dir, args.shorthand,
args.wordvec_type.name.lower())
logger.info("Pretrain not found. Looking in {}".format(vec_file))
pretrain = Pretrain(pretrain_file, vec_file, args.pretrain_max_vocab)
logger.info("Embedding shape: %s" % str(pretrain.emb.shape))
return pretrain
def train(args):
utils.ensure_dir(args['save_dir'])
model_file = args['save_dir'] + '/' + args['save_name'] if args['save_name'] is not None \
else '{}/{}_nertagger.pt'.format(args['save_dir'], args['shorthand'])
# load pretrained vectors
if len(args['wordvec_file']) == 0:
vec_file = utils.get_wordvec_file(args['wordvec_dir'],
args['shorthand'])
else:
vec_file = args['wordvec_file']
# do not save pretrained embeddings individually
pretrain = Pretrain(None,
vec_file,
args['pretrain_max_vocab'],
save_to_file=False)
if args['charlm']:
if args['charlm_shorthand'] is None:
logger.info(
"CharLM Shorthand is required for loading pretrained CharLM model..."
)
sys.exit(0)
logger.info('Use pretrained contextualized char embedding')
args['charlm_forward_file'] = '{}/{}_forward_charlm.pt'.format(
args['charlm_save_dir'], args['charlm_shorthand'])
args['charlm_backward_file'] = '{}/{}_backward_charlm.pt'.format(
args['charlm_save_dir'], args['charlm_shorthand'])
# load data
logger.info("Loading data with batch size {}...".format(
args['batch_size']))
train_doc = Document(json.load(open(args['train_file'])))
train_batch = DataLoader(train_doc,
args['batch_size'],
args,
pretrain,
evaluation=False)
vocab = train_batch.vocab
dev_doc = Document(json.load(open(args['eval_file'])))
dev_batch = DataLoader(dev_doc,
args['batch_size'],
args,
pretrain,
vocab=vocab,
evaluation=True)
dev_gold_tags = dev_batch.tags
# skip training if the language does not have training or dev data
if len(train_batch) == 0 or len(dev_batch) == 0:
logger.info("Skip training because no data available...")
sys.exit(0)
logger.info("Training tagger...")
trainer = Trainer(args=args,
vocab=vocab,
pretrain=pretrain,
use_cuda=args['cuda'])
logger.info(trainer.model)
global_step = 0
max_steps = args['max_steps']
dev_score_history = []
best_dev_preds = []
current_lr = trainer.optimizer.param_groups[0]['lr']
global_start_time = time.time()
format_str = '{}: step {}/{}, loss = {:.6f} ({:.3f} sec/batch), lr: {:.6f}'
# LR scheduling
if args['lr_decay'] > 0:
scheduler = torch.optim.lr_scheduler.ReduceLROnPlateau(trainer.optimizer, mode='max', factor=args['lr_decay'], \
patience=args['patience'], verbose=True, min_lr=args['min_lr'])
else:
scheduler = None
# start training
train_loss = 0
while True:
should_stop = False
for i, batch in enumerate(train_batch):
start_time = time.time()
global_step += 1
loss = trainer.update(batch, eval=False) # update step
train_loss += loss
if global_step % args['log_step'] == 0:
duration = time.time() - start_time
logger.info(format_str.format(datetime.now().strftime("%Y-%m-%d %H:%M:%S"), global_step,\
max_steps, loss, duration, current_lr))
if global_step % args['eval_interval'] == 0:
# eval on dev
logger.info("Evaluating on dev set...")
dev_preds = []
for batch in dev_batch:
preds = trainer.predict(batch)
dev_preds += preds
_, _, dev_score = scorer.score_by_entity(
dev_preds, dev_gold_tags)
train_loss = train_loss / args[
'eval_interval'] # avg loss per batch
logger.info(
"step {}: train_loss = {:.6f}, dev_score = {:.4f}".format(
global_step, train_loss, dev_score))
train_loss = 0
# save best model
if len(dev_score_history
) == 0 or dev_score > max(dev_score_history):
trainer.save(model_file)
logger.info("New best model saved.")
best_dev_preds = dev_preds
dev_score_history += [dev_score]
logger.info("")
# lr schedule
if scheduler is not None:
scheduler.step(dev_score)
# check stopping
current_lr = trainer.optimizer.param_groups[0]['lr']
if global_step >= args['max_steps'] or current_lr <= args['min_lr']:
should_stop = True
break
if should_stop:
break
train_batch.reshuffle()
logger.info("Training ended with {} steps.".format(global_step))
best_f, best_eval = max(dev_score_history) * 100, np.argmax(
dev_score_history) + 1
logger.info("Best dev F1 = {:.2f}, at iteration = {}".format(
best_f, best_eval * args['eval_interval']))
def train(args):
utils.ensure_dir(args['save_dir'])
model_file = args['save_dir'] + '/' + args['save_name'] if args['save_name'] is not None \
else '{}/{}_parser.pt'.format(args['save_dir'], args['shorthand'])
# load pretrained vectors if needed
pretrain = None
if args['pretrain']:
vec_file = args['wordvec_file'] if args['wordvec_file'] else utils.get_wordvec_file(args['wordvec_dir'], args['shorthand'])
pretrain_file = '{}/{}.pretrain.pt'.format(args['save_dir'], args['shorthand'])
pretrain = Pretrain(pretrain_file, vec_file, args['pretrain_max_vocab'])
# load data
print("Loading data with batch size {}...".format(args['batch_size']))
train_doc = Document(CoNLL.conll2dict(input_file=args['train_file']))
train_batch = DataLoader(train_doc, args['batch_size'], args, pretrain, evaluation=False)
vocab = train_batch.vocab
dev_doc = Document(CoNLL.conll2dict(input_file=args['eval_file']))
dev_batch = DataLoader(dev_doc, args['batch_size'], args, pretrain, vocab=vocab, evaluation=True, sort_during_eval=True)
# pred and gold path
system_pred_file = args['output_file']
gold_file = args['gold_file']
# skip training if the language does not have training or dev data
if len(train_batch) == 0 or len(dev_batch) == 0:
print("Skip training because no data available...")
sys.exit(0)
print("Training parser...")
trainer = Trainer(args=args, vocab=vocab, pretrain=pretrain, use_cuda=args['cuda'])
global_step = 0
max_steps = args['max_steps']
dev_score_history = []
best_dev_preds = []
current_lr = args['lr']
global_start_time = time.time()
format_str = '{}: step {}/{}, loss = {:.6f} ({:.3f} sec/batch), lr: {:.6f}'
using_amsgrad = False
last_best_step = 0
# start training
train_loss = 0
while True:
do_break = False
for i, batch in enumerate(train_batch):
start_time = time.time()
global_step += 1
loss = trainer.update(batch, eval=False) # update step
train_loss += loss
if global_step % args['log_step'] == 0:
duration = time.time() - start_time
print(format_str.format(datetime.now().strftime("%Y-%m-%d %H:%M:%S"), global_step,\
max_steps, loss, duration, current_lr))
if global_step % args['eval_interval'] == 0:
# eval on dev
print("Evaluating on dev set...")
dev_preds = []
for batch in dev_batch:
preds = trainer.predict(batch)
dev_preds += preds
dev_preds = utils.unsort(dev_preds, dev_batch.data_orig_idx)
dev_batch.doc.set([HEAD, DEPREL], [y for x in dev_preds for y in x])
CoNLL.dict2conll(dev_batch.doc.to_dict(), system_pred_file)
_, _, dev_score = scorer.score(system_pred_file, gold_file)
train_loss = train_loss / args['eval_interval'] # avg loss per batch
print("step {}: train_loss = {:.6f}, dev_score = {:.4f}".format(global_step, train_loss, dev_score))
train_loss = 0
# save best model
if len(dev_score_history) == 0 or dev_score > max(dev_score_history):
last_best_step = global_step
trainer.save(model_file)
print("new best model saved.")
best_dev_preds = dev_preds
dev_score_history += [dev_score]
print("")
if global_step - last_best_step >= args['max_steps_before_stop']:
if not using_amsgrad:
print("Switching to AMSGrad")
last_best_step = global_step
using_amsgrad = True
trainer.optimizer = optim.Adam(trainer.model.parameters(), amsgrad=True, lr=args['lr'], betas=(.9, args['beta2']), eps=1e-6)
else:
do_break = True
break
if global_step >= args['max_steps']:
do_break = True
break
if do_break: break
train_batch.reshuffle()
print("Training ended with {} steps.".format(global_step))
best_f, best_eval = max(dev_score_history)*100, np.argmax(dev_score_history)+1
print("Best dev F1 = {:.2f}, at iteration = {}".format(best_f, best_eval * args['eval_interval']))
def _set_up_model(self, config, use_gpu):
self._pretrain = Pretrain(
config['pretrain_path']) if 'pretrain_path' in config else None
self._trainer = Trainer(pretrain=self.pretrain,
model_file=config['model_path'],
use_cuda=use_gpu)
def train(args):
utils.ensure_dir(args['save_dir'])
model_file = os.path.join(args['save_dir'], args['save_name']) if args['save_name'] is not None \
else '{}/{}_nertagger.pt'.format(args['save_dir'], args['shorthand'])
pretrain = None
vocab = None
trainer = None
if args['finetune'] and args['finetune_load_name']:
logger.warning('Finetune is ON. Using model from "{}"'.format(args['finetune_load_name']))
_, trainer, vocab = load_model(args, args['finetune_load_name'])
elif args['finetune'] and os.path.exists(model_file):
logger.warning('Finetune is ON. Using model from "{}"'.format(model_file))
_, trainer, vocab = load_model(args, model_file)
else:
if args['finetune']:
raise FileNotFoundError('Finetune is set to true but model file is not found: {}'.format(model_file))
# load pretrained vectors
if args['wordvec_pretrain_file']:
pretrain_file = args['wordvec_pretrain_file']
pretrain = Pretrain(pretrain_file, None, args['pretrain_max_vocab'], save_to_file=False)
else:
if len(args['wordvec_file']) == 0:
vec_file = utils.get_wordvec_file(args['wordvec_dir'], args['shorthand'])
else:
vec_file = args['wordvec_file']
# do not save pretrained embeddings individually
pretrain = Pretrain(None, vec_file, args['pretrain_max_vocab'], save_to_file=False)
if pretrain is not None:
word_emb_dim = pretrain.emb.shape[1]
if args['word_emb_dim'] and args['word_emb_dim'] != word_emb_dim:
logger.warning("Embedding file has a dimension of {}. Model will be built with that size instead of {}".format(word_emb_dim, args['word_emb_dim']))
args['word_emb_dim'] = word_emb_dim
if args['charlm']:
if args['charlm_shorthand'] is None:
raise ValueError("CharLM Shorthand is required for loading pretrained CharLM model...")
logger.info('Using pretrained contextualized char embedding')
if not args['charlm_forward_file']:
args['charlm_forward_file'] = '{}/{}_forward_charlm.pt'.format(args['charlm_save_dir'], args['charlm_shorthand'])
if not args['charlm_backward_file']:
args['charlm_backward_file'] = '{}/{}_backward_charlm.pt'.format(args['charlm_save_dir'], args['charlm_shorthand'])
# load data
logger.info("Loading data with batch size {}...".format(args['batch_size']))
train_doc = Document(json.load(open(args['train_file'])))
train_batch = DataLoader(train_doc, args['batch_size'], args, pretrain, vocab=vocab, evaluation=False)
vocab = train_batch.vocab
dev_doc = Document(json.load(open(args['eval_file'])))
dev_batch = DataLoader(dev_doc, args['batch_size'], args, pretrain, vocab=vocab, evaluation=True)
dev_gold_tags = dev_batch.tags
if args['finetune']:
utils.warn_missing_tags([i for i in trainer.vocab['tag']], train_batch.tags, "training set")
utils.warn_missing_tags(train_batch.tags, dev_batch.tags, "dev set")
# skip training if the language does not have training or dev data
if len(train_batch) == 0 or len(dev_batch) == 0:
logger.info("Skip training because no data available...")
sys.exit(0)
logger.info("Training tagger...")
if trainer is None: # init if model was not loaded previously from file
trainer = Trainer(args=args, vocab=vocab, pretrain=pretrain, use_cuda=args['cuda'],
train_classifier_only=args['train_classifier_only'])
logger.info(trainer.model)
global_step = 0
max_steps = args['max_steps']
dev_score_history = []
best_dev_preds = []
current_lr = trainer.optimizer.param_groups[0]['lr']
global_start_time = time.time()
format_str = '{}: step {}/{}, loss = {:.6f} ({:.3f} sec/batch), lr: {:.6f}'
# LR scheduling
if args['lr_decay'] > 0:
scheduler = torch.optim.lr_scheduler.ReduceLROnPlateau(trainer.optimizer, mode='max', factor=args['lr_decay'], \
patience=args['patience'], verbose=True, min_lr=args['min_lr'])
else:
scheduler = None
# start training
train_loss = 0
while True:
should_stop = False
for i, batch in enumerate(train_batch):
start_time = time.time()
global_step += 1
loss = trainer.update(batch, eval=False) # update step
train_loss += loss
if global_step % args['log_step'] == 0:
duration = time.time() - start_time
logger.info(format_str.format(datetime.now().strftime("%Y-%m-%d %H:%M:%S"), global_step,\
max_steps, loss, duration, current_lr))
if global_step % args['eval_interval'] == 0:
# eval on dev
logger.info("Evaluating on dev set...")
dev_preds = []
for batch in dev_batch:
preds = trainer.predict(batch)
dev_preds += preds
_, _, dev_score = scorer.score_by_entity(dev_preds, dev_gold_tags)
train_loss = train_loss / args['eval_interval'] # avg loss per batch
logger.info("step {}: train_loss = {:.6f}, dev_score = {:.4f}".format(global_step, train_loss, dev_score))
train_loss = 0
# save best model
if len(dev_score_history) == 0 or dev_score > max(dev_score_history):
trainer.save(model_file)
logger.info("New best model saved.")
best_dev_preds = dev_preds
dev_score_history += [dev_score]
logger.info("")
# lr schedule
if scheduler is not None:
scheduler.step(dev_score)
# check stopping
current_lr = trainer.optimizer.param_groups[0]['lr']
if global_step >= args['max_steps'] or current_lr <= args['min_lr']:
should_stop = True
break
if should_stop:
break
train_batch.reshuffle()
logger.info("Training ended with {} steps.".format(global_step))
if len(dev_score_history) > 0:
best_f, best_eval = max(dev_score_history)*100, np.argmax(dev_score_history)+1
logger.info("Best dev F1 = {:.2f}, at iteration = {}".format(best_f, best_eval * args['eval_interval']))
def _set_up_model(self, config, use_gpu):
self._pretagged = config.get('pretagged')
self._pretrain = Pretrain(config['pretrain_path'])
self._trainer = Trainer(pretrain=self.pretrain,
model_file=config['model_path'],
use_cuda=use_gpu)