def __init__(self,
min_sum = None,
**kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(message_type = "Find Sum",
message_data = {"min_sum" : min_sum},
test_mode = self.test_mode)
def __init__(self,
directory=None,
length=None,
name=None,
overwrite=True,
parameters=None,
**kwds):
super().__init__(**kwds)
self.directory = directory
self.length = length
self.name = name
self.parameters = parameters
data_dict = {
"directory": self.directory,
"length": self.length,
"name": self.name,
"overwrite": overwrite
}
if parameters is not None:
data_dict["parameters"] = parameters
self.tcp_message = tcpMessage.TCPMessage(message_type="Take Movie",
message_data=data_dict,
test_mode=self.test_mode)
def moveStageMessage(stagex, stagey, is_other=False):
return tcpMessage.TCPMessage(message_type="Move Stage",
message_data={
"stage_x": stagex,
"stage_y": stagey,
"is_other": is_other
})
def setup(self, node):
# Create message and add delay time for accurate dave time estimates
self.message = tcpMessage.TCPMessage(message_type = "Pause");
# Define pause behaviors
self.should_pause = True
self.should_pause_default = True
def __init__(self, x=None, y=None, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(message_type="Move Stage",
message_data={
"stage_x": x,
"stage_y": y
},
test_mode=self.test_mode)
def __init__(self, stage_x=0.0, stage_y=0.0, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(message_type="Move Stage",
message_data={
"stage_x": stage_x,
"stage_y": stage_y
})
def setup(self, node):
self.directory = node.find("directory").text
self.message = tcpMessage.TCPMessage(
message_type="Set Directory",
message_data={"directory": self.directory})
# Require validation
self.id = self.message.getType() + " "
self.id += self.directory
def __init__(self, mode_name=None, locked=None, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(
message_type="Set Focus Lock Mode",
message_data={
"mode_name": mode_name,
"locked": locked
},
test_mode=self.test_mode)
def __init__(self, filename=None, prog_type=None, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(
message_type="Set Progression",
message_data={
"filename": filename,
"type": prog_type
},
test_mode=self.test_mode)
def __init__(self, directory="", filename="", length=1, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(message_type="Take Movie",
message_data={
"name": filename,
"directory": directory,
"length": length
})
def setup(self, node):
self.directory = node.find("directory").text
import os
if not os.path.exists(self.directory):
os.makedirs(self.directory)
self.message = tcpMessage.TCPMessage(message_type = "Set Directory",
message_data = {"directory": self.directory})
# Require validation
self.id = self.message.getType() + " "
self.id += self.directory
def setup(self, node):
self.stage_x = float(node.find("stage_x").text)
self.stage_y = float(node.find("stage_y").text)
self.message = tcpMessage.TCPMessage(message_type = "Move Stage",
message_data = {"stage_x" : self.stage_x,
"stage_y" : self.stage_y})
# Create id to indicate required validation
self.id = self.message.getType() + " "
self.id += "stage_x: " + str(self.stage_x) + " "
self.id += "stage_y: " + str(self.stage_y)
def setup(self, node):
# Prepare delay timer
self.delay_timer = QtCore.QTimer(self)
self.delay_timer.setSingleShot(True)
self.delay_timer.timeout.connect(self.handleTimerComplete)
self.delay = int(node.find("wakeup").text)
# Create message and add delay time for accurate dave time estimates
self.message = tcpMessage.TCPMessage(message_type = "Delay",
message_data = {"delay": self.delay});
self.message.addResponse("duration", self.delay)
def setup(self, node):
p_node = node.find("parameters")
if (p_node.attrib["type"] == "int"):
self.parameters = int(node.find("parameters").text)
else:
self.parameters = node.find("parameters").text
self.message = tcpMessage.TCPMessage(message_type = "Set Parameters",
message_data = {"parameters" : self.parameters})
# Require validation
self.id = self.message.getType() + " "
self.id += str(self.parameters)
def setup(self, node):
self.protocol_name = node.text
self.protocol_is_running = False
self.message = tcpMessage.TCPMessage(message_type = "Kilroy Protocol",
message_data = {"name": self.protocol_name})
# Require validation.
#
# FIXME: This should be '+=' not '='?
#
self.id = self.message.getType() + " "
self.id = self.protocol_name
def setup(self, node):
# Look for message data
if node.find("subject") is not None:
self.email_subject = node.find("subject").text
if node.find("body") is not None:
self.email_body = node.find("body").text
# Create message data
message_data = {"subject": self.email_subject, "body": self.email_body}
self.message = tcpMessage.TCPMessage(message_type="Dave Email",
message_data=message_data)
def __init__(self,
focus_scan = None,
num_focus_checks = None,
scan_range = None,
z_center = None,
**kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(message_type = "Check Focus Lock",
message_data = {"focus_scan" : focus_scan,
"num_focus_checks" : num_focus_checks,
"scan_range" : scan_range,
"z_center" : z_center},
test_mode = self.test_mode)
def sendTestMessage(self):
"""
Send test messages.
"""
if (self.message_ID == 1):
# Create Test message
message = tcpMessage.TCPMessage(message_type="Stage Position",
message_data={
"Stage_X": 100.00,
"Stage_Y": 0.00
})
elif (self.message_ID == 2):
message = tcpMessage.TCPMessage(message_type="Movie",
message_data={
"Name": "Test_Movie_01",
"Parameters": 1
})
else:
message = tcpMessage.TCPMessage(message_type="Done")
self.message_ID += 1
self.sent_message = message
self.client.sendMessage(message)
def movieMessage(filename, directory):
"""
Creates a movie message for communication via TCPClient.
filename - The name of the movie.
directory - Where to save the movie.
"""
#
# Note - We don't use 'overwrite' = True as the captureStart() method
# is supposed to take care of removing the previous film.
#
return tcpMessage.TCPMessage(message_type="Take Movie",
message_data={
"name": filename,
"directory": directory,
"length": 1
})
def setup(self, node):
# Determine the number of focus checks
if node.find("num_focus_checks") is not None:
self.num_focus_checks = int(node.find("num_focus_checks").text)
# Add focus_scan flag if provided
if node.find("focus_scan") is not None:
self.focus_scan = True
# Add range if provided
if node.find("scan_range") is not None:
self.scan_range = float(node.find("scan_range").text)
message_data = {"num_focus_checks": self.num_focus_checks,
"focus_scan": self.focus_scan,
"scan_range": self.scan_range}
self.message = tcpMessage.TCPMessage(message_type = "Check Focus Lock",
message_data = message_data)
def setup(self, node):
# Prepare source and target paths and decide wheter to delete the source after
self.source_path = node.find("source_path").text
self.target_path = node.find("target_path").text
self.delete_source = eval(node.find("delete_source").text)
# Create message and add delay time for accurate dave time estimates
self.message = tcpMessage.TCPMessage(message_type="Copy",
message_data={
"source_path":
self.source_path,
"target_path":
self.target_path,
"delete_source":
self.delete_source
})
self.message.addResponse(
"duration", 1000
) #assume 1 second for getting the subproccess of copying going
def setup(self, node):
self.name = node.find("name").text
self.length = int(node.find("length").text)
self.min_spots = 0
if node.find("min_spots") is not None:
self.min_spots = int(node.find("min_spots").text)
message_data = {
"name": self.name,
"length": self.length,
"min_spots": self.min_spots,
"parameters": None
}
if node.find("parameters") is not None:
message_data["parameters"] = node.find("parameters").text
if node.find("directory") is not None:
message_data["directory"] = node.find("directory").text
if node.find("overwrite") is not None:
message_data["overwrite"] = True # Default is to overwrite
boolean_text = node.find("overwrite").text
if (boolean_text.lower() == "false"):
message_data["overwrite"] = False
self.message = tcpMessage.TCPMessage(message_type="Take Movie",
message_data=message_data)
# Require validation.
#
# FIXME: This should be '+=' not '='?
#
self.id = self.message.getType() + " "
self.id = str(self.length) + " "
if message_data["parameters"] is not None:
self.id = str(message_data["parameters"])
def setup(self, node):
self.type = node.find("type").text
message_data = {"type" : self.type}
# File progression.
if node.find("filename") is not None:
message_data["filename"] = node.find("filename").text
# Math progression.
elif node.find("channel") is not None:
channels = []
for ch_node in [x for x in node if (x.tag == "channel")]:
channel = int(ch_node.text)
start = float(ch_node.attrib["start"])
if "frames" in ch_node.attrib:
frames = int(ch_node.attrib["frames"])
else:
frames = 100
if "inc" in ch_node.attrib:
inc = float(ch_node.attrib["inc"])
else:
inc = 0.0
channels.append([channel, start, frames, inc])
message_data["channels"] = channels
self.message = tcpMessage.TCPMessage(message_type = "Set Progression",
message_data = message_data)
# Require validation only for provided filenames
if node.find("filename") is not None:
self.id = self.message.getType() + " "
self.id += node.find("filename").text
def __init__(self, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(
message_type="Get Stage Position", test_mode=self.test_mode)
def __init__(self, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(message_type="Get Objective",
test_mode=self.test_mode)
def __init__(self, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(
message_type="Get Mosaic Settings", test_mode=self.test_mode)
def __init__(self, name_or_index=None, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(
message_type="Set Parameters",
message_data={"parameters": name_or_index},
test_mode=self.test_mode)
def __init__(self, lock_target=None, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(
message_type="Set Lock Target",
message_data={"lock_target": lock_target},
test_mode=self.test_mode)
def __init__(self, **kwds):
super().__init__(**kwds)
self.tcp_message = tcpMessage.TCPMessage(
message_type="No Such Message", test_mode=self.test_mode)
def setup(self, node):
self.message = tcpMessage.TCPMessage(message_type = "Recenter Piezo")