def esub(args, bsubargs, jobscript):
data = {"command": ""}
if args.aices:
data["project"] = "aices"
if args.aices2:
data["project"] = "aices2"
scriptargs = []
for line in jobscript.splitlines(True):
if line.startswith("#!"):
data["command"] += line
elif line.startswith("#BSUB "):
scriptargs += shlex.split(line[6:].split("#")[0])
else:
data["command"] += line.split("#")[0]
bsubargs = scriptargs + bsubargs
last = False
cmd = False
for arg in bsubargs:
if cmd:
data["command"] += " " + arg
continue
if arg[0] == "-":
if last:
data[last] = True
last = arg
else:
if last:
data[last] = arg
last = False
else:
cmd = True
data["command"] = arg
if last:
data[last] = True
try:
jobid = submitjob(data)
subprocess.Popen(["ejobs", "--noheader", jobid])
except Exception as e:
print(color(e.strerror, "r"))
sys.exit(-1)
def esub(args, bsubargs, jobscript):
data = {"command": ""}
if args.aices:
data["project"] = "aices"
if args.aices2:
data["project"] = "aices2"
scriptargs = []
for line in jobscript.splitlines(True):
if line.startswith("#!"):
data["command"] += line
elif line.startswith("#BSUB "):
scriptargs += shlex.split(line[6:].split("#")[0])
else:
data["command"] += line.split("#")[0]
bsubargs = scriptargs + bsubargs
last = False
cmd = False
for arg in bsubargs:
if cmd:
data["command"] += " " + arg
continue
if arg[0] == "-":
if last:
data[last] = True
last = arg
else:
if last:
data[last] = arg
last = False
else:
cmd = True
data["command"] = arg
if last:
data[last] = True
try:
jobid = submitjob(data)
subprocess.Popen(["ejobs", "--noheader", jobid])
except Exception as e:
print(color(e.strerror, "r"))
sys.exit(-1)
def esub(args, bsubargs, jobscript):
"""Wrapper script with bsub functionality."""
data = {"command": ""}
scriptargs = []
for line in jobscript.splitlines(True):
if line.startswith("#!"):
data["command"] += line
elif line.startswith("#BSUB "):
scriptargs += shlex.split(line[6:].split("#")[0])
else:
data["command"] += line.split("#")[0]
bsubargs = scriptargs + bsubargs
last = False
cmd = False
for arg in bsubargs:
if cmd:
data["command"] += " " + arg
continue
if arg[0] == "-":
if last:
data[last] = True
last = arg
else:
if last:
data[last] = arg
last = False
else:
cmd = True
data["command"] = arg
if last:
data[last] = True
try:
jobid = submitjob(data)
print(jobid)
except Exception as e:
print(color(e.strerror, "r"))
sys.exit(-1)
def esub(args, bsubargs, jobscript):
"""Wrapper script with bsub functionality."""
data = {"command": ""}
scriptargs = []
for line in jobscript.splitlines(True):
if line.startswith("#!"):
data["command"] += line
elif line.startswith("#BSUB "):
scriptargs += shlex.split(line[6:].split("#")[0])
else:
data["command"] += line.split("#")[0]
bsubargs = scriptargs + bsubargs
last = False
cmd = False
for arg in bsubargs:
if cmd:
data["command"] += " " + arg
continue
if arg[0] == "-":
if last:
data[last] = True
last = arg
else:
if last:
data[last] = arg
last = False
else:
cmd = True
data["command"] = arg
if last:
data[last] = True
try:
jobid = submitjob(data)
print(jobid)
except Exception as e:
print(color(e.strerror, "r"))
sys.exit(-1)