def testParser3():
logging.basicConfig(level=logging.DEBUG,
format='%(asctime)s %(levelname)s %(message)s',
datefmt='%d%b%Y %H:%M:%S')
p = Parser()
portionlist = ["ncwa in.nc temp.nc", "ncwa temp.nc temp.nc",
"ncwa temp.nc out.nc"]
portion = "\n".join(portionlist)
cf = CommandFactory(Config.dummyConfig())
p.parseScript(portion, cf)
def testParser2():
logging.basicConfig(level=logging.DEBUG,
format='%(asctime)s %(levelname)s %(message)s',
datefmt='%d%b%Y %H:%M:%S')
wholelist = open("full_resamp.swamp").readlines()
test = [ "".join(wholelist[:10]),
"".join(wholelist[:400]),
"".join(wholelist),
testScript4]
p = Parser()
cf = CommandFactory(Config.dummyConfig())
p.parseScript(test[1], cf)
def testParser():
test1 = """#!/usr/local/bin/bash
# Analysis script for CAM/CLM output.
#export CASEID1=camsomBC_1998d11
ncwa in.nc out.nc
CASEID1=$1
DATA=nothing
export ANLDIR=${DATA}/anl_${CASEID1}
export STB_YR=00
export FRST_YR=0000
export LAST_YR=0014
export MDL=clm2
let Y1=$FRST_YR+1
let Y9=1
let Y9=1+1
mkdir -p ${ANLDIR} #inline comment
mkdir -p ${DATA}/${CASEID1}/tmp
# Move /tmp files into original directories (strictly precautionary):
mv ${DATA}/${CASEID1}/tmp/* ${DATA}/${CASEID1}/
# Move data from year 0 out of the way
mv ${DATA}/${CASEID1}/${CASEID1}.${MDL}.h0.${FRST_YR}-??.nc ${DATA}/${CASEID1}/tmp/
# STEP 1: Create ensemble annual and seasonal means
# Bring in December of year 0 for seasonal mean
mv ${DATA}/${CASEID1}/tmp/${CASEID1}.${MDL}.h0.${FRST_YR}-12.nc ${DATA}/${CASEID1}/
for yr in `seq $Y1 $LAST_YR`; do
YY=`printf "%04d" ${yr}`
let yrm=yr-1
YM=`printf "%04d" ${yrm}`
ncrcat -O ${DATA}/${CASEID1}/${CASEID1}.${MDL}.h0.${YM}-12.nc ${DATA}/${CASEID1}/${CASEID1}.${MDL}.h0.${YY}-??.nc ${ANLDIR}/foo2.nc
"""
logging.basicConfig(level=logging.DEBUG,
format='%(asctime)s %(levelname)s %(message)s',
datefmt='%d%b%Y %H:%M:%S')
# filename='/tmp/myapp.log',
# filemode='w')
p = Parser()
p.parseScript(test1, None)
