def index(request, experiment_id):
url = 'monash_ands/form.html'
try:
e = Experiment.objects.get(id=experiment_id)
import sys
allowed_protocol = sys.modules['%s.%s.settings' %
(settings.TARDIS_APP_ROOT, 'monash_ands')].ALLOWED_PROTOCOL
if not request.user.is_authenticated():
# todo: de-duplicate
from django.template import Context
c = Context()
c['disallowed_protocol'] = True
return HttpResponse(render_response_index(request, url, c))
ua = UserAuthentication.objects.get(username=request.user.username)
if not ua.authenticationMethod == allowed_protocol:
from django.template import Context
c = Context()
c['is_owner'] = authz.has_experiment_ownership(request,
experiment_id)
c['disallowed_protocol'] = True
return HttpResponse(render_response_index(request, url, c))
if not request.POST:
monashandsService = MonashANDSService(experiment_id)
c = monashandsService.get_context(request)
if request.user.is_authenticated():
c['is_owner'] = authz.has_experiment_ownership(request,
experiment_id)
c['experiment'] = e
cch = CreativeCommonsHandler(experiment_id=experiment_id, create=False)
c['has_cc_license'] = cch.has_cc_license()
return HttpResponse(render_response_index(request, url, c))
else:
monashandsService = MonashANDSService(experiment_id)
c = monashandsService.register(request)
if request.user.is_authenticated():
c['is_owner'] = authz.has_experiment_ownership(request,
experiment_id)
c['experiment'] = e
return HttpResponse(render_response_index(request, url, c))
except Exception, e:
# todo: check with web services for adequate responses..
message = '<b>An error occured:</b> ' + str(e)
return HttpResponse(content=message)
def show_cc_license(value):
"""
Shows creative commons license information for the experiment richly
:param value: The experiment ID
:type value: string
:return: An html-formatted string of the creative commons license
:rtype: string
"""
experiment = Experiment.objects.get(id=value)
cch = CreativeCommonsHandler(experiment_id=experiment.id, create=False)
if not cch.has_cc_license():
return "No license."
else:
psm = cch.get_or_create_cc_parameterset()
image = ""
try:
image = psm.get_param('license_image', True)
except ExperimentParameter.DoesNotExist:
pass
name = ""
try:
name = psm.get_param('license_name', True)
except ExperimentParameter.DoesNotExist:
pass
uri = ""
try:
uri = psm.get_param('license_uri', True)
except ExperimentParameter.DoesNotExist:
pass
if name == "":
html = "No License."
else:
html = '<a href="' + uri + '"'\
'rel="license" class="cc_js_a"><img width="88" height="31"'\
' border="0" class="cc_js_cc-button"'\
'src="' + image + '"'\
'alt="Creative Commons License"></a><br/>'\
'This work is licensed under a <a rel="license"'\
'href="' + uri + '">'\
'' + name + '</a>.'
return html
def show_cc_license(value):
"""
Shows creative commons license information for the experiment richly
:param value: The experiment ID
:type value: string
:return: An html-formatted string of the creative commons license
:rtype: string
"""
experiment = Experiment.objects.get(id=value)
cch = CreativeCommonsHandler(experiment_id=experiment.id, create=False)
if not cch.has_cc_license():
return "No license."
else:
psm = cch.get_or_create_cc_parameterset()
image = ""
try:
image = psm.get_param('license_image', True)
except ExperimentParameter.DoesNotExist:
pass
name = ""
try:
name = psm.get_param('license_name', True)
except ExperimentParameter.DoesNotExist:
pass
uri = ""
try:
uri = psm.get_param('license_uri', True)
except ExperimentParameter.DoesNotExist:
pass
if name == "":
html = "No License."
else:
html = '<a href="' + uri + '"'\
'rel="license" class="cc_js_a"><img width="88" height="31"'\
' border="0" class="cc_js_cc-button"'\
'src="' + image + '"'\
'alt="Creative Commons License"></a><br/>'\
'This work is licensed under a <a rel="license"'\
'href="' + uri + '">'\
'' + name + '</a>.'
return html
def index(request, experiment_id):
url = 'ands_register/index.html'
e = Experiment.objects.get(pk=experiment_id)
cch = CreativeCommonsHandler(experiment_id=experiment_id, create=False)
has_licence = cch.has_cc_license()
is_owner = authz.has_experiment_ownership(request, experiment_id)
if request.POST:
if not is_owner:
return return_response_error(request)
publish_handler = publishing.PublishHandler(experiment_id, True)
form = forms.PublishingForm(has_licence, request.POST)
if form.is_valid():
cleaned_data = form.cleaned_data
publish_handler.update(cleaned_data)
return HttpResponse('{"success": true}', mimetype='application/json')
else:
publish_handler = publishing.PublishHandler(experiment_id)
form = forms.PublishingForm(has_licence, initial=publish_handler.form_data())
c = Context()
c['is_owner'] = is_owner
c['has_licence'] = has_licence
c['experiment'] = e
c['form'] = form
c['custom_description'] = publish_handler.custom_description()
authors = [a.author for a in e.author_experiment_set.all()]
c['authors_csv'] = ', '.join(authors)
custom_authors = publish_handler.custom_authors()
if custom_authors:
c['custom_authors_csv'] = ', '.join(custom_authors)
c['access_type'] = publish_handler.access_type()
return HttpResponse(render_response_index(request, url, c))
def publish_experiment(request, experiment_id):
"""
Make the experiment open to public access.
Sets off a chain of PublishProvider modules for
extra publish functionality.
:param request: a HTTP Request instance
:type request: :class:`django.http.HttpRequest`
:param experiment_id: the ID of the experiment to be published
:type experiment_id: string
"""
import os
logger.debug("started publish for hpctardis")
experiment = Experiment.objects.get(id=experiment_id)
#username = str(request.user).partition('_')[2]
username = request.user.username
logger.debug("request=%s" % request)
logger.debug("exp=%s" % experiment_id)
logger.debug("requestmethod=%s" % request.method)
publishService = RMITANDSService(experiment.id)
logger.debug("made service")
if publishService.is_under_review():
logger.debug("under review")
context_dict = {}
context_dict['legal'] = True
context_dict['status'] = False
context_dict['success'] = False
context_dict['publish_result'] = [{'status':True,
'message':'Experiment is under review'}]
c = Context(context_dict)
return HttpResponse(render_response_index(request,
'tardis_portal/publish_experiment.html', c))
if experiment.public:
context_dict = {}
logger.debug("Already published")
context_dict['legal'] = True
context_dict['success'] = False
context_dict['publish_result'] = [{'status':True,
'message':'Experiment is already published'}]
c = Context(context_dict)
return HttpResponse(render_response_index(request,
'tardis_portal/publish_experiment.html', c))
if request.method == 'POST': # If the form has been submitted...
logger.debug("posted")
legal = True
success = True
context_dict = {}
#fix this slightly dodgy logic
context_dict['publish_result'] = "submitted"
if 'legal' in request.POST:
# only make public when all providers signal okay
# experiment.public = True
# experiment.save()
logger.debug("legal set")
context_dict['publish_result'] = \
publishService.execute_publishers(request)
for result in context_dict['publish_result']:
if not result['status']:
success = False
else:
logger.debug('Legal agreement for exp: ' + experiment_id +
' not accepted.')
legal = False
# set dictionary to legal status and publish success result
context_dict['legal'] = legal
context_dict['success'] = success
else:
logger.debug("unposted")
TARDIS_ROOT = os.path.abspath(\
os.path.join(os.path.dirname(__file__)))
legalpath = os.path.join(TARDIS_ROOT,
"publish/legal.txt")
# if legal file isn't found then we can't proceed
try:
legalfile = open(legalpath, 'r')
except IOError:
logger.error('legal.txt not found. Publication halted.')
return return_response_error(request)
legaltext = legalfile.read()
legalfile.close()
logger.debug("templatepaths=%s" % publishService.get_template_paths())
from tardis.tardis_portal.creativecommonshandler import CreativeCommonsHandler
cch = CreativeCommonsHandler(experiment_id=experiment_id, create=False)
context_dict = \
{'username': username,
'experiment': experiment,
'legaltext': legaltext,
'publish_forms': publishService.get_template_paths(),
'has_cc_license': cch.has_cc_license(),
'has_ands_registered': True,
}
#context_dict = \
#{'username': username,
#'publish_forms': publishService.get_template_paths(),
#'experiment': experiment,
#'legaltext': legaltext,
#}
context_dict = dict(context_dict, \
**publishService.get_contexts(request))
logger.debug("context_dict=%s" % context_dict )
c = Context(context_dict)
# FIXME: make own versionso publish_experiment template
return HttpResponse(render_response_index(request,
'tardis_portal/publish_experiment.html', c))
def register(self, request):
"""
Use the EIF038 web services to gather and store party/activity
ids for the linkages required by ANDS Research Data Australia.
:param request: a HTTP Request instance
:type request: :class:`django.http.HttpRequest`
"""
username = request.user.username
pais = PartyActivityInformationService()
pai = pais.get_pai()
monash_id_list = []
experiment = Experiment.objects.get(id=self.experiment_id)
self.clear_existing_parameters(request)
if not('ldap_existing_party' in request.POST or\
'ldap_party' in request.POST):
return {'status': False,
'message': 'Error: Must have at least' +
' one Monash party nominated'}
if 'ldap_existing_party' in request.POST:
for email in request.POST.getlist('ldap_existing_party'):
relation_name = 'exists-' + email + '-relation'
if relation_name in request.POST:
monash_id_list.append(\
{'party_param': email,
'relation_param': request.POST[relation_name]})
# write new party info for existing party
if settings.OAI_DOCS_PATH:
party_rif_cs = pai.get_party_rifcs(email)
XMLWriter.write_xml_to_file(
'rif',
'party',
email,
party_rif_cs
)
message = ""
if 'ldap_party' in request.POST:
fail = False
for email in request.POST.getlist('ldap_party'):
if str(email):
monash_id = ""
try:
l = LDAPUserQuery()
authcate = []
authcate.append([LDAPUserQuery.get_user_attr(u, 'uid')\
for u in \
l.get_authcate_exact(email)])
monash_id = pai.get_unique_party_id(authcate[0][0])
relation_name = 'new-' + email + '-relation'
if relation_name in request.POST:
monash_id_list.append(\
{'party_param': monash_id,
'relation_param': request.POST[relation_name]})
except urllib2.URLError:
fail = True
logger.error("Can't contact research" +
" master web service")
message = message + \
'Error: Cannot contact Activity' + \
' / Party Service. Please try again later.' \
+ "<br/>"
except IndexError:
logger.error("Can't contact ldap for " +
email)
fail = True
error = "Can't get authcate for email address: " + email\
+ "<br/>"
message = message + "<br/>" + error
except KeyError:
logger.error("Couldn't find authcate for " +
email)
fail = True
error = "Can't get authcate for email address: " + email\
+ "<br/>"
message = message + "<br/>" + error
if fail:
return {'status': False,
'message': message}
for monash_id in monash_id_list:
self.save_party_parameter(experiment,
monash_id['party_param'], monash_id['relation_param'])
if settings.OAI_DOCS_PATH:
party_rif_cs = pai.get_party_rifcs(monash_id['party_param'])
XMLWriter.write_xml_to_file(
'rif',
'party',
monash_id['party_param'],
party_rif_cs
)
for activity_id in request.POST.getlist('activity'):
if activity_id in self.get_existing_activity_keys():
pass
else:
self.save_activity_parameter(experiment, activity_id)
if settings.OAI_DOCS_PATH:
activity_rif_cs = pai.get_activity_rifcs(activity_id)
XMLWriter.write_xml_to_file(
'rif',
'activity',
activity_id,
activity_rif_cs
)
cch = CreativeCommonsHandler(experiment_id=experiment.id, create=False)
license_name = ""
if cch.has_cc_license():
psm = cch.get_or_create_cc_parameterset()
license_name = ""
try:
license_name = psm.get_param('license_name', True)
except ExperimentParameter.DoesNotExist:
pass
c = Context(dict({
'now': datetime.datetime.now(),
'experiment': experiment,
'party_keys': monash_id_list,
'activity_keys': request.POST.getlist('activity'),
'site_domain': Site.objects.get_current().domain,
'license_name': license_name,
}))
custom_description = None
if 'custom_description' in request.POST:
custom_description = request.POST['custom_description']
if custom_description:
schema = 'http://localhost/pilot/collection/1.0/'
psm = \
self.get_or_create_parameterset(schema)
psm.set_param("custom_description", custom_description,
"Custom Description For ANDS Research Data Australia")
c['custom_description'] = custom_description
selected_profile = self.get_profile()
if not selected_profile:
selected_profile = "default.xml"
profile_template = "monash_ands/profiles/" + selected_profile
import sys
mas_settings = sys.modules['%s.%s.settings' %
(settings.TARDIS_APP_ROOT, 'monash_ands')]
if mas_settings.HANDLE_ENABLE:
if not experiment.handle:
try:
from HandleService import HandleService
hdlsrv = HandleService()
response = hdlsrv.mint(
mas_settings.AUTHTYPE, mas_settings.IDENTIFIER,
mas_settings.AUTHDOMAIN, mas_settings.APPID,
mas_settings.MINTURL, \
Site.objects.get_current().domain +\
"/experiment/view/" + str(experiment.id))
from xml.dom import minidom
xmldoc = minidom.parseString(response)
handle = xmldoc.firstChild.childNodes[1].attributes["handle"].value
if handle:
experiment.handle = handle
experiment.save()
except KeyError:
logger.error(response)
logger.error("Persistent handle minting failed")
if settings.OAI_DOCS_PATH:
XMLWriter.write_template_to_file(
'rif',
'collection',
experiment.id,
profile_template,
c,
)
if request.POST['profile']:
profile = request.POST['profile']
self.save_rif_cs_profile(experiment, profile)
else:
return {'status': True,
'message': 'No profiles exist to choose from'}
schema = "http://localhost/pilot/registration_record/1.0/"
psm = ParameterSetManager(schema=schema,
parentObject=experiment)
now = datetime.datetime.now().strftime("%d %B %Y %Y %I:%M%p")
psm.set_param("registration_date", now,
"Registration Date")
psm.set_param("registered_by", request.user.username,
"Registered By")
return {'status': True, 'message': 'Successfully registered experiment.'}
def publish_experiment(request, experiment_id):
"""
Make the experiment open to public access.
Sets off a chain of PublishProvider modules for
extra publish functionality.
:param request: a HTTP Request instance
:type request: :class:`django.http.HttpRequest`
:param experiment_id: the ID of the experiment to be published
:type experiment_id: string
"""
import os
logger.debug("started publish for hpctardis")
experiment = Experiment.objects.get(id=experiment_id)
#username = str(request.user).partition('_')[2]
username = request.user.username
logger.debug("request=%s" % request)
logger.debug("exp=%s" % experiment_id)
logger.debug("requestmethod=%s" % request.method)
publishService = RMITANDSService(experiment.id)
logger.debug("made service")
if publishService.is_under_review():
logger.debug("under review")
context_dict = {}
context_dict['legal'] = True
context_dict['status'] = False
context_dict['success'] = False
context_dict['publish_result'] = [{
'status':
True,
'message':
'Experiment is under review'
}]
c = Context(context_dict)
return HttpResponse(
render_response_index(request,
'tardis_portal/publish_experiment.html', c))
if experiment.public:
context_dict = {}
logger.debug("Already published")
context_dict['legal'] = True
context_dict['success'] = False
context_dict['publish_result'] = [{
'status':
True,
'message':
'Experiment is already published'
}]
c = Context(context_dict)
return HttpResponse(
render_response_index(request,
'tardis_portal/publish_experiment.html', c))
if request.method == 'POST': # If the form has been submitted...
logger.debug("posted")
legal = True
success = True
context_dict = {}
#fix this slightly dodgy logic
context_dict['publish_result'] = "submitted"
if 'legal' in request.POST:
# only make public when all providers signal okay
# experiment.public = True
# experiment.save()
logger.debug("legal set")
context_dict['publish_result'] = \
publishService.execute_publishers(request)
for result in context_dict['publish_result']:
if not result['status']:
success = False
else:
logger.debug('Legal agreement for exp: ' + experiment_id +
' not accepted.')
legal = False
# set dictionary to legal status and publish success result
context_dict['legal'] = legal
context_dict['success'] = success
else:
logger.debug("unposted")
TARDIS_ROOT = os.path.abspath(\
os.path.join(os.path.dirname(__file__)))
legalpath = os.path.join(TARDIS_ROOT, "publish/legal.txt")
# if legal file isn't found then we can't proceed
try:
legalfile = open(legalpath, 'r')
except IOError:
logger.error('legal.txt not found. Publication halted.')
return return_response_error(request)
legaltext = legalfile.read()
legalfile.close()
logger.debug("templatepaths=%s" % publishService.get_template_paths())
from tardis.tardis_portal.creativecommonshandler import CreativeCommonsHandler
cch = CreativeCommonsHandler(experiment_id=experiment_id, create=False)
context_dict = \
{'username': username,
'experiment': experiment,
'legaltext': legaltext,
'publish_forms': publishService.get_template_paths(),
'has_cc_license': cch.has_cc_license(),
'has_ands_registered': True,
}
#context_dict = \
#{'username': username,
#'publish_forms': publishService.get_template_paths(),
#'experiment': experiment,
#'legaltext': legaltext,
#}
context_dict = dict(context_dict, \
**publishService.get_contexts(request))
logger.debug("context_dict=%s" % context_dict)
c = Context(context_dict)
# FIXME: make own versionso publish_experiment template
return HttpResponse(
render_response_index(request, 'tardis_portal/publish_experiment.html',
c))
def register(self, request):
"""
Use the EIF038 web services to gather and store party/activity
ids for the linkages required by ANDS Research Data Australia.
:param request: a HTTP Request instance
:type request: :class:`django.http.HttpRequest`
"""
username = request.user.username
pais = PartyActivityInformationService()
pai = pais.get_pai()
monash_id_list = []
experiment = Experiment.objects.get(id=self.experiment_id)
self.clear_existing_parameters(request)
if not('ldap_existing_party' in request.POST or\
'ldap_party' in request.POST):
return {'status': False,
'message': 'Error: Must have at least' +
' one Monash party nominated'}
if 'ldap_existing_party' in request.POST:
for email in request.POST.getlist('ldap_existing_party'):
relation_name = 'exists-' + email + '-relation'
if relation_name in request.POST:
monash_id_list.append(\
{'party_param': email,
'relation_param': request.POST[relation_name]})
# write new party info for existing party
if settings.OAI_DOCS_PATH:
party_rif_cs = pai.get_party_rifcs(email)
XMLWriter.write_xml_to_file(
'',
'party',
email.replace('MON:',''),
party_rif_cs
)
message = ""
if 'ldap_party' in request.POST:
fail = False
for email in request.POST.getlist('ldap_party'):
if str(email):
import sys
mas_settings = sys.modules['%s.%s.settings' %
(settings.TARDIS_APP_ROOT, 'monash_ands')]
if mas_settings.ALLOWED_PROTOCOL == "ldap":
monash_id = ""
try:
l = LDAPUserQuery()
authcate = []
authcate.append([LDAPUserQuery.get_user_attr(u, 'uid')\
for u in \
l.get_authcate_exact(email)])
monash_id = pai.get_unique_party_id(authcate[0][0])
relation_name = 'new-' + email + '-relation'
if relation_name in request.POST:
monash_id_list.append(\
{'party_param': monash_id,
'relation_param': request.POST[relation_name]})
except urllib2.URLError:
fail = True
logger.error("Can't contact research" +
" master web service")
message = message + \
'Error: Cannot contact Activity' + \
' / Party Service. Please try again later.' \
+ "<br/>"
except IndexError:
logger.error("Can't contact ldap for " +
email)
fail = True
error = "Can't get authcate for email address: " + email\
+ "<br/>"
message = message + "<br/>" + error
except KeyError:
logger.error("Couldn't find authcate for " +
email)
fail = True
error = "Can't get authcate for email address: " + email\
+ "<br/>"
message = message + "<br/>" + error
else:
# if not hooked up to ldap
relation_name = 'new-' + email + '-relation'
if relation_name in request.POST:
monash_id_list.append(\
{'party_param': email,
'relation_param': request.POST[relation_name]})
if fail:
return {'status': False,
'message': message}
for monash_id in monash_id_list:
self.save_party_parameter(experiment,
monash_id['party_param'], monash_id['relation_param'])
if settings.OAI_DOCS_PATH:
party_rif_cs = pai.get_party_rifcs(monash_id['party_param'])
XMLWriter.write_xml_to_file(
'',
'party',
monash_id['party_param'].replace('MON:',''),
party_rif_cs
)
for activity_id in request.POST.getlist('activity'):
if activity_id in self.get_existing_activity_keys():
pass
else:
self.save_activity_parameter(experiment, activity_id)
if settings.OAI_DOCS_PATH:
activity_rif_cs = pai.get_activity_rifcs(activity_id)
XMLWriter.write_xml_to_file(
'',
'activity',
activity_id.replace('MON:',''),
activity_rif_cs
)
cch = CreativeCommonsHandler(experiment_id=experiment.id, create=False)
license_name = ""
if cch.has_cc_license():
psm = cch.get_or_create_cc_parameterset()
license_name = ""
try:
license_name = psm.get_param('license_name', True)
except ExperimentParameter.DoesNotExist:
pass
c = Context(dict({
'now': datetime.datetime.now(),
'experiment': experiment,
'party_keys': monash_id_list,
'activity_keys': request.POST.getlist('activity'),
'site_domain': Site.objects.get_current().domain,
'license_name': license_name,
}))
custom_description = None
if 'custom_description' in request.POST:
custom_description = request.POST['custom_description']
if custom_description and len(custom_description):
schema = 'http://localhost/pilot/collection/1.0/'
psm = \
self.get_or_create_parameterset(schema)
psm.set_param("custom_description", custom_description,
"Custom Description For ANDS Research Data Australia")
c['custom_description'] = custom_description
selected_profile = self.get_profile()
if not selected_profile:
selected_profile = "default.xml"
profile_template = "monash_ands/profiles/" + selected_profile
import sys
mas_settings = sys.modules['%s.%s.settings' %
(settings.TARDIS_APP_ROOT, 'monash_ands')]
if mas_settings.DOI_ENABLE:
if 'mint_doi' in request.POST:
doisrv = DOIService(experiment)
try:
site_url = Site.objects.get_current().domain
exp_url = experiment.get_absolute_url()
print site_url + exp_url
doi = doisrv.mint(site_url + exp_url)
self.save_doi(doi)
except urllib2.HTTPError, e:
logger.error("doi minting failed")
logger.debug(e.read())