def wait_for_repository_installation(self, repository_ids):
final_states = [
install_model.ToolShedRepository.installation_status.ERROR,
install_model.ToolShedRepository.installation_status.INSTALLED
]
# Wait until all repositories are in a final state before returning. This ensures that subsequent tests
# are running against an installed repository, and not one that is still in the process of installing.
if repository_ids:
for repository_id in repository_ids:
galaxy_repository = test_db_util.get_repository(
self.security.decode_id(repository_id))
log.debug( 'Repository %s with ID %s has initial state %s.' % \
( str( galaxy_repository.name ), str( repository_id ), str( galaxy_repository.status ) ) )
timeout_counter = 0
while galaxy_repository.status not in final_states:
test_db_util.refresh(galaxy_repository)
log.debug( 'Repository %s with ID %s is in state %s, continuing to wait.' % \
( str( galaxy_repository.name ), str( repository_id ), str( galaxy_repository.status ) ) )
timeout_counter = timeout_counter + 1
if timeout_counter % 10 == 0:
log.debug(
'Waited %d seconds for repository %s.' %
(timeout_counter, str(galaxy_repository.name)))
# This timeout currently defaults to 10 minutes.
if timeout_counter > repository_installation_timeout:
raise AssertionError( 'Repository installation timed out after %d seconds, repository state is %s.' % \
( timeout_counter, repository.status ) )
break
time.sleep(1)
# Set all metadata on each installed repository.
for repository_id in repository_ids:
galaxy_repository = test_db_util.get_repository(
self.security.decode_id(repository_id))
if not galaxy_repository.metadata:
log.debug('Setting metadata on repository %s' %
str(galaxy_repository.name))
timeout_counter = 0
url = '/admin_toolshed/reset_repository_metadata?id=%s' % repository_id
self.visit_url(url)
while not galaxy_repository.metadata:
test_db_util.refresh(galaxy_repository)
timeout_counter = timeout_counter + 1
if timeout_counter % 10 == 0:
log.debug(
'Waited %d seconds for repository %s.' %
(timeout_counter, str(galaxy_repository.name)))
# This timeout currently defaults to 10 minutes.
if timeout_counter > repository_installation_timeout:
raise AssertionError( 'Repository installation timed out after %d seconds, repository state is %s.' % \
( timeout_counter, galaxy_repository.status ) )
break
time.sleep(1)
def wait_for_repository_installation( self, repository_ids ):
final_states = [ model.ToolShedRepository.installation_status.ERROR,
model.ToolShedRepository.installation_status.INSTALLED ]
# Wait until all repositories are in a final state before returning. This ensures that subsequent tests
# are running against an installed repository, and not one that is still in the process of installing.
if repository_ids:
for repository_id in repository_ids:
galaxy_repository = test_db_util.get_repository( self.security.decode_id( repository_id ) )
timeout_counter = 0
while galaxy_repository.status not in final_states:
test_db_util.refresh( galaxy_repository )
timeout_counter = timeout_counter + 1
# This timeout currently defaults to 180 seconds, or 3 minutes.
if timeout_counter > common.repository_installation_timeout:
raise AssertionError( 'Repository installation timed out, %d seconds elapsed, repository state is %s.' % \
( timeout_counter, repository.status ) )
break
time.sleep( 1 )
def wait_for_repository_installation( self, repository_ids ):
final_states = [ install_model.ToolShedRepository.installation_status.ERROR,
install_model.ToolShedRepository.installation_status.INSTALLED ]
# Wait until all repositories are in a final state before returning. This ensures that subsequent tests
# are running against an installed repository, and not one that is still in the process of installing.
if repository_ids:
for repository_id in repository_ids:
galaxy_repository = test_db_util.get_repository( self.security.decode_id( repository_id ) )
log.debug( 'Repository %s with ID %s has initial state %s.' % \
( str( galaxy_repository.name ), str( repository_id ), str( galaxy_repository.status ) ) )
timeout_counter = 0
while galaxy_repository.status not in final_states:
test_db_util.refresh( galaxy_repository )
log.debug( 'Repository %s with ID %s is in state %s, continuing to wait.' % \
( str( galaxy_repository.name ), str( repository_id ), str( galaxy_repository.status ) ) )
timeout_counter = timeout_counter + 1
if timeout_counter % 10 == 0:
log.debug( 'Waited %d seconds for repository %s.' % ( timeout_counter, str( galaxy_repository.name ) ) )
# This timeout currently defaults to 10 minutes.
if timeout_counter > repository_installation_timeout:
raise AssertionError( 'Repository installation timed out after %d seconds, repository state is %s.' % \
( timeout_counter, repository.status ) )
break
time.sleep( 1 )
# Set all metadata on each installed repository.
for repository_id in repository_ids:
galaxy_repository = test_db_util.get_repository( self.security.decode_id( repository_id ) )
if not galaxy_repository.metadata:
log.debug( 'Setting metadata on repository %s' % str( galaxy_repository.name ) )
timeout_counter = 0
url = '/admin_toolshed/reset_repository_metadata?id=%s' % repository_id
self.visit_url( url )
while not galaxy_repository.metadata:
test_db_util.refresh( galaxy_repository )
timeout_counter = timeout_counter + 1
if timeout_counter % 10 == 0:
log.debug( 'Waited %d seconds for repository %s.' % ( timeout_counter, str( galaxy_repository.name ) ) )
# This timeout currently defaults to 10 minutes.
if timeout_counter > repository_installation_timeout:
raise AssertionError( 'Repository installation timed out after %d seconds, repository state is %s.' % \
( timeout_counter, galaxy_repository.status ) )
break
time.sleep( 1 )
