def test_FormatExtensionMap_no_ffkey(realistic_format_search_result):
fe_map = FormatExtensionMap(ffe_all=realistic_format_search_result)
assert hasattr(fe_map, 'fe_dict')
assert fe_map.fe_dict == {'bam':{'standard_extension': 'bam',
'other_allowed_extensions': [],
'extrafile_formats': ['/file-formats/bai/']},
'bai':{'standard_extension': 'bam.bai',
'extrafile_formats': [],
'other_allowed_extensions': []}}
assert fe_map.get_extension('bam') == 'bam'
assert fe_map.get_other_extensions('bai') == []
assert fe_map.get_extension('fastq') is None
def test_FormatExtensionMap2(realistic_format_search_result):
with mock.patch("tibanna_ffcommon.file_format.search_metadata", return_value=realistic_format_search_result):
fe_map = FormatExtensionMap({'server': 'some_server'})
assert hasattr(fe_map, 'fe_dict')
assert fe_map.fe_dict == {'bam':{'standard_extension': 'bam',
'other_allowed_extensions': [],
'extrafile_formats': ['/file-formats/bai/']},
'bai':{'standard_extension': 'bam.bai',
'extrafile_formats': [],
'other_allowed_extensions': []}}
assert fe_map.get_extension('bam') == 'bam'
assert fe_map.get_other_extensions('bai') == []
assert fe_map.get_extension('fastq') is None