def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s.sync_center()
done = s.start(0)
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
class Counter(SchedulerPlugin):
def start(self, scheduler):
scheduler.add_plugin(self)
self.count = 0
def task_finished(self, scheduler, key, worker, nbytes):
self.count += 1
counter = Counter()
counter.start(s)
assert counter.count == 0
sched.put_nowait({'op': 'update-graph',
'tasks': {'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')},
'dependencies': {'y': {'x'}, 'z': {'y'}},
'keys': ['z']})
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
assert counter.count == 3
sched.put_nowait({'op': 'close'})
yield done
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
s.update_graph(dsk={'x-1': (inc, 1),
'x-2': (inc, 'x-1'),
'x-3': (inc, 'x-2'),
'y-1': (dec, 'x-3'),
'y-2': (dec, 'y-1'),
'e': (throws, 'y-2'),
'other': (inc, 123)},
keys=['e'])
while True:
msg = yield report.get()
if msg['op'] == 'task-erred' and msg['key'] == 'e':
break
p = MultiProgressWidget(['e'], scheduler=s, complete=True)
assert set(concat(p.all_keys.values())) == {'x-1', 'x-2', 'x-3', 'y-1',
'y-2', 'e'}
assert all(b.value == 1.0 for b in p.bars.values())
assert p.texts['x'].value == '3 / 3'
assert p.texts['y'].value == '2 / 2'
sched.put_nowait({'op': 'close'})
yield done
def test_robust_to_bad_plugin(s, a, b):
sched, report = Queue(), Queue()
s.handle_queues(sched, report)
class Bad(SchedulerPlugin):
def task_finished(self, scheduler, key, worker, nbytes):
raise Exception()
bad = Bad()
s.add_plugin(bad)
sched.put_nowait({
'op':
'update-graph',
'tasks':
valmap(dumps_task, {
'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')
}),
'dependencies': {
'y': ['x'],
'z': ['y']
},
'keys': ['z']
})
while True: # normal execution
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
s.update_graph(dsk={'x-1': (inc, 1),
'x-2': (inc, 'x-1'),
'x-3': (inc, 'x-2'),
'y-1': (dec, 'x-3'),
'y-2': (dec, 'y-1'),
'e': (throws, 'y-2'),
'other': (inc, 123)},
keys=['e'])
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'y-2':
break
p = MultiProgressWidget(['x-1', 'x-2', 'x-3'], scheduler=s)
assert set(concat(p.all_keys.values())).issuperset({'x-1', 'x-2', 'x-3'})
assert 'x' in p.bars
sched.put_nowait({'op': 'close'})
yield done
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
s.update_graph(dsk={'x': (div, 1, 0)},
keys=['x'])
progress = TextProgressBar(['x'], scheduler=s)
progress.start()
while True:
msg = yield report.get()
if msg.get('key') == 'x':
break
assert progress.status == 'error'
assert not progress._timer.is_alive()
progress = TextProgressBar(['x'], scheduler=s)
progress.start()
assert progress.status == 'error'
assert not progress._timer or not progress._timer.is_alive()
sched.put_nowait({'op': 'close'})
yield done
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
s.update_graph(dsk={'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')},
keys=['z'])
progress = TextProgressBar(['z'], scheduler=s)
progress.start()
assert progress.all_keys == {'x', 'y', 'z'}
assert progress.keys == {'x', 'y', 'z'}
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
assert progress.keys == set()
check_bar_completed(capsys)
assert progress not in s.plugins
sched.put_nowait({'op': 'close'})
yield done
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
class Counter(SchedulerPlugin):
def start(self, scheduler):
scheduler.add_plugin(self)
self.count = 0
def task_finished(self, scheduler, key, worker, nbytes):
self.count += 1
counter = Counter()
counter.start(s)
assert counter.count == 0
sched.put_nowait({'op': 'update-graph',
'dsk': {'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')},
'keys': ['z']})
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
assert counter.count == 3
sched.put_nowait({'op': 'close'})
yield done
class Stream(object):
def __init__(self, raw_headers, header_table):
self._queue = Queue()
self._header_table = header_table
self._current_headers = self._header_table.merge(raw_headers)
@gen.coroutine
def get(self, timeout=0):
if timeout == 0:
res, headers = yield self._queue.get()
else:
deadline = datetime.timedelta(seconds=timeout)
res, headers = yield self._queue.get(deadline)
self._current_headers = headers
if isinstance(res, Exception):
raise res
else:
raise gen.Return(res)
def push(self, item, raw_headers):
headers = self._header_table.merge(raw_headers)
self._queue.put_nowait((item, headers))
def done(self, raw_headers):
headers = self._header_table.merge(raw_headers)
return self._queue.put_nowait((ChokeEvent(), headers))
def error(self, errnumber, reason, raw_headers):
headers = self._header_table.merge(raw_headers)
return self._queue.put_nowait((RequestError(errnumber, reason), headers))
@property
def headers(self):
return self._current_headers
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
class Bad(SchedulerPlugin):
def task_finished(self, scheduler, key, worker, nbytes):
raise Exception()
bad = Bad()
s.add_plugin(bad)
sched.put_nowait({'op': 'update-graph',
'dsk': {'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')},
'keys': ['z']})
while True: # normal execution
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
sched.put_nowait({'op': 'close'})
yield done
def test_multi_queues(s, a, b):
sched, report = Queue(), Queue()
s.handle_queues(sched, report)
msg = yield report.get()
assert msg['op'] == 'stream-start'
# Test update graph
sched.put_nowait({'op': 'update-graph',
'dsk': {'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')},
'keys': ['z']})
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
slen, rlen = len(s.scheduler_queues), len(s.report_queues)
sched2, report2 = Queue(), Queue()
s.handle_queues(sched2, report2)
assert slen + 1 == len(s.scheduler_queues)
assert rlen + 1 == len(s.report_queues)
sched2.put_nowait({'op': 'update-graph',
'dsk': {'a': (inc, 10)},
'keys': ['a']})
for q in [report, report2]:
while True:
msg = yield q.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'a':
break
def test_diagnostic(s, a, b):
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
class Counter(SchedulerPlugin):
def start(self, scheduler):
scheduler.add_plugin(self)
self.count = 0
def task_finished(self, scheduler, key, worker, nbytes):
self.count += 1
counter = Counter()
counter.start(s)
assert counter.count == 0
sched.put_nowait({'op': 'update-graph',
'tasks': {'x': dumps_task((inc, 1)),
'y': dumps_task((inc, 'x')),
'z': dumps_task((inc, 'y'))},
'dependencies': {'y': ['x'], 'z': ['y']},
'keys': ['z']})
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
assert counter.count == 3
class ConnectionPool(object):
def __init__(self, servers, maxsize=15, minsize=1, loop=None, debug=0):
loop = loop if loop is not None else tornado.ioloop.IOLoop.instance()
if debug:
logging.basicConfig(
level=logging.DEBUG,
format="'%(levelname)s %(asctime)s"
" %(module)s:%(lineno)d %(process)d %(thread)d %(message)s'")
self._loop = loop
self._servers = servers
self._minsize = minsize
self._debug = debug
self._in_use = set()
self._pool = Queue(maxsize)
@gen.coroutine
def clear(self):
"""Clear pool connections."""
while not self._pool.empty():
conn = yield self._pool.get()
conn.close_socket()
def size(self):
return len(self._in_use) + self._pool.qsize()
@gen.coroutine
def acquire(self):
"""Acquire connection from the pool, or spawn new one
if pool maxsize permits.
:return: ``Connetion`` (reader, writer)
"""
while self.size() < self._minsize:
_conn = yield self._create_new_conn()
yield self._pool.put(_conn)
conn = None
while not conn:
if not self._pool.empty():
conn = yield self._pool.get()
if conn is None:
conn = yield self._create_new_conn()
self._in_use.add(conn)
raise gen.Return(conn)
@gen.coroutine
def _create_new_conn(self):
conn = yield Connection.get_conn(self._servers, self._debug)
raise gen.Return(conn)
def release(self, conn):
self._in_use.remove(conn)
try:
self._pool.put_nowait(conn)
except (QueueEmpty, QueueFull):
conn.close_socket()
def test_multi_queues(s, a, b):
sched, report = Queue(), Queue()
s.handle_queues(sched, report)
msg = yield report.get()
assert msg['op'] == 'stream-start'
# Test update graph
sched.put_nowait({
'op':
'update-graph',
'tasks':
valmap(dumps_task, {
'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')
}),
'dependencies': {
'x': [],
'y': ['x'],
'z': ['y']
},
'keys': ['z']
})
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
slen, rlen = len(s.scheduler_queues), len(s.report_queues)
sched2, report2 = Queue(), Queue()
s.handle_queues(sched2, report2)
assert slen + 1 == len(s.scheduler_queues)
assert rlen + 1 == len(s.report_queues)
sched2.put_nowait({
'op': 'update-graph',
'tasks': {
'a': dumps_task((inc, 10))
},
'dependencies': {
'a': []
},
'keys': ['a']
})
for q in [report, report2]:
while True:
msg = yield q.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'a':
break
class MockWebsocketHandler(LanguageServerWebSocketHandler):
_messages_wrote = None # type: Queue
def __init__(self):
pass
def initialize(self, manager):
super().initialize(manager)
self._messages_wrote = Queue()
def write_message(self, message: Text) -> None:
self.log.warning("write_message %s", message)
self._messages_wrote.put_nowait(message)
async def get_peers(self) -> Set[str]:
c = self.db.cursor()
c.execute("SELECT url FROM peers")
peers: Set[str] = set(p[0] for p in c.fetchall())
if (datetime.utcnow() - timedelta(hours=1) > self.last_peers_update or self.peer_cache_invalidated) \
and not self.fetching_peers:
self.fetching_peers = True
self.last_peers_update = datetime.utcnow()
# Peer queue
peers_to_check = Queue()
for p in peers:
peers_to_check.put_nowait(p)
peers_to_check_set: Set[str] = peers.copy()
results: List[bool] = []
attempted_contact: Set[str] = {CHORD_URL}
# noinspection PyAsyncCall,PyTypeChecker
workers = tornado.gen.multi([
self.peer_worker(peers, peers_to_check, peers_to_check_set,
attempted_contact, results)
for _ in range(WORKERS)
])
# Wait for all peers to be processed
await peers_to_check.join()
self.peer_cache_invalidated = self.peer_cache_invalidated or (
True in results)
# Store any new peers in the possibly augmented set
for peer in peers:
insert_or_ignore_peer(c, peer)
# Commit any new peers to the database
self.db.commit()
self.fetching_peers = False
# Trigger exit for all workers
for _ in range(WORKERS):
peers_to_check.put_nowait(None)
# Wait for workers to exit
await workers
return peers
class MockWebsocketHandler(LanguageServerWebSocketHandler):
_messages_wrote = None # type: Queue
_ping_sent = None # type: bool
def __init__(self):
self.request = HTTPServerRequest()
self.application = Application()
def initialize(self, manager):
super().initialize(manager)
self._messages_wrote = Queue()
self._ping_sent = False
def write_message(self, message: Text) -> None:
self.log.warning("write_message %s", message)
self._messages_wrote.put_nowait(message)
def send_ping(self):
self._ping_sent = True
def test_robust_to_bad_plugin(s, a, b):
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
class Bad(SchedulerPlugin):
def task_finished(self, scheduler, key, worker, nbytes):
raise Exception()
bad = Bad()
s.add_plugin(bad)
sched.put_nowait({'op': 'update-graph',
'dsk': {'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')},
'keys': ['z']})
while True: # normal execution
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
def test_diagnostic(s, a, b):
sched, report = Queue(), Queue()
s.handle_queues(sched, report)
msg = yield report.get()
assert msg['op'] == 'stream-start'
class Counter(SchedulerPlugin):
def start(self, scheduler):
scheduler.add_plugin(self)
self.count = 0
def task_finished(self, scheduler, key, worker, nbytes, **kwargs):
self.count += 1
counter = Counter()
counter.start(s)
assert counter in s.plugins
assert counter.count == 0
sched.put_nowait({
'op': 'update-graph',
'tasks': {
'x': dumps_task((inc, 1)),
'y': dumps_task((inc, 'x')),
'z': dumps_task((inc, 'y'))
},
'dependencies': {
'y': ['x'],
'z': ['y']
},
'keys': ['z']
})
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
assert counter.count == 3
s.remove_plugin(counter)
assert counter not in s.plugins
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
s.update_graph(dsk={'x-1': (inc, 1),
'x-2': (inc, 'x-1'),
'x-3': (inc, 'x-2'),
'y-1': (dec, 'x-3'),
'y-2': (dec, 'y-1')},
keys=['y-2'])
p = MultiProgress(['y-2'], scheduler=s, func=lambda s: s.split('-')[0])
assert p.keys == {'x': {'x-1', 'x-2', 'x-3'},
'y': {'y-1', 'y-2'}}
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'x-3':
break
assert p.keys == {'x': set(),
'y': {'y-1', 'y-2'}}
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'y-2':
break
assert p.keys == {'x': set(),
'y': set()}
assert p.status == 'finished'
sched.put_nowait({'op': 'close'})
yield done
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
s.update_graph(dsk={'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')},
keys=['z'])
bars = [Progress(keys=['z'], scheduler=s) for i in range(10)]
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
assert all(b.status == 'finished' for b in bars)
sched.put_nowait({'op': 'close'})
yield done
class Stream(object):
def __init__(self, raw_headers, header_table):
self._queue = Queue()
self._header_table = header_table
self._current_headers = self._header_table.merge(raw_headers)
@gen.coroutine
def get(self, timeout=0):
if timeout == 0:
res, headers = yield self._queue.get()
else:
deadline = datetime.timedelta(seconds=timeout)
res, headers = yield self._queue.get(deadline)
self._current_headers = headers
if isinstance(res, Exception):
raise res
else:
raise gen.Return(res)
def push(self, item, raw_headers):
headers = self._header_table.merge(raw_headers)
self._queue.put_nowait((item, headers))
def done(self, raw_headers):
headers = self._header_table.merge(raw_headers)
return self._queue.put_nowait((ChokeEvent(), headers))
def error(self, errnumber, reason, raw_headers):
headers = self._header_table.merge(raw_headers)
return self._queue.put_nowait((RequestError(errnumber,
reason), headers))
@property
def headers(self):
return self._current_headers
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
s.update_graph(dsk={'x': (inc, 1),
'y': (inc, 'x'),
'z': (inc, 'y')},
keys=['z'])
progress = ProgressWidget(['z'], scheduler=s)
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'z':
break
progress._update()
assert progress.bar.value == 1.0
assert 's' in progress.bar.description
sched.put_nowait({'op': 'close'})
yield done
class Rx(PrettyPrintable):
def __init__(self, rx_tree, io_loop=None, servicename=None):
# If it's not the main thread
# and a current IOloop doesn't exist here,
# IOLoop.instance becomes self._io_loop
self._io_loop = io_loop or IOLoop.current()
self._queue = Queue()
self._done = False
self.servicename = servicename
self.rx_tree = rx_tree
self.default_protocol = detect_protocol_type(rx_tree)
@coroutine
def get(self, timeout=0, protocol=None):
if self._done and self._queue.empty():
raise ChokeEvent()
# to pull variuos service errors
if timeout <= 0 or timeout is None:
item = yield self._queue.get()
else:
deadline = datetime.timedelta(seconds=timeout)
item = yield self._queue.get(deadline)
if isinstance(item, Exception):
raise item
if protocol is None:
protocol = self.default_protocol
name, payload = item
res = protocol(name, payload)
if isinstance(res, ProtocolError):
raise ServiceError(self.servicename, res.reason,
res.code, res.category)
else:
raise Return(res)
def done(self):
self._done = True
def push(self, msg_type, payload):
dispatch = self.rx_tree.get(msg_type)
log.debug("dispatch %s %.300s", dispatch, payload)
if dispatch is None:
raise InvalidMessageType(self.servicename, CocaineErrno.INVALIDMESSAGETYPE,
"unexpected message type %s" % msg_type)
name, rx = dispatch
log.debug("name `%s` rx `%s`", name, rx)
self._queue.put_nowait((name, payload))
if rx == {}: # the last transition
self.done()
elif rx is not None: # not a recursive transition
self.rx_tree = rx
def error(self, err):
self._queue.put_nowait(err)
def closed(self):
return self._done
def _format(self):
return "name: %s, queue: %s, done: %s" % (
self.servicename, self._queue, self._done)
class SubscribeListener(SubscribeCallback):
def __init__(self):
self.connected = False
self.connected_event = Event()
self.disconnected_event = Event()
self.presence_queue = Queue()
self.message_queue = Queue()
self.error_queue = Queue()
def status(self, pubnub, status):
if utils.is_subscribed_event(status) and not self.connected_event.is_set():
self.connected_event.set()
elif utils.is_unsubscribed_event(status) and not self.disconnected_event.is_set():
self.disconnected_event.set()
elif status.is_error():
self.error_queue.put_nowait(status.error_data.exception)
def message(self, pubnub, message):
self.message_queue.put(message)
def presence(self, pubnub, presence):
self.presence_queue.put(presence)
@tornado.gen.coroutine
def _wait_for(self, coro):
error = self.error_queue.get()
wi = tornado.gen.WaitIterator(coro, error)
while not wi.done():
result = yield wi.next()
if wi.current_future == coro:
raise gen.Return(result)
elif wi.current_future == error:
raise result
else:
raise Exception("Unexpected future resolved: %s" % str(wi.current_future))
@tornado.gen.coroutine
def wait_for_connect(self):
if not self.connected_event.is_set():
yield self._wait_for(self.connected_event.wait())
else:
raise Exception("instance is already connected")
@tornado.gen.coroutine
def wait_for_disconnect(self):
if not self.disconnected_event.is_set():
yield self._wait_for(self.disconnected_event.wait())
else:
raise Exception("instance is already disconnected")
@tornado.gen.coroutine
def wait_for_message_on(self, *channel_names):
channel_names = list(channel_names)
while True:
try: # NOQA
env = yield self._wait_for(self.message_queue.get())
if env.channel in channel_names:
raise tornado.gen.Return(env)
else:
continue
finally:
self.message_queue.task_done()
@tornado.gen.coroutine
def wait_for_presence_on(self, *channel_names):
channel_names = list(channel_names)
while True:
try:
try:
env = yield self._wait_for(self.presence_queue.get())
except: # NOQA E722 pylint: disable=W0702
break
if env.channel in channel_names:
raise tornado.gen.Return(env)
else:
continue
finally:
self.presence_queue.task_done()
class Scheduler(object):
def __init__(self, center, delete_batch_time=1):
self.scheduler_queue = Queue()
self.report_queue = Queue()
self.delete_queue = Queue()
self.status = None
self.center = coerce_to_rpc(center)
self.dask = dict()
self.dependencies = dict()
self.dependents = dict()
self.generation = 0
self.has_what = defaultdict(set)
self.held_data = set()
self.in_play = set()
self.keyorder = dict()
self.nbytes = dict()
self.ncores = dict()
self.processing = dict()
self.restrictions = dict()
self.stacks = dict()
self.waiting = dict()
self.waiting_data = dict()
self.who_has = defaultdict(set)
self.exceptions = dict()
self.tracebacks = dict()
self.exceptions_blame = dict()
self.delete_batch_time = delete_batch_time
@gen.coroutine
def _sync_center(self):
self.ncores, self.has_what, self.who_has = yield [
self.center.ncores(),
self.center.has_what(),
self.center.who_has()]
def start(self):
collections = [self.dask, self.dependencies, self.dependents,
self.waiting, self.waiting_data, self.in_play, self.keyorder,
self.nbytes, self.processing, self.restrictions]
for collection in collections:
collection.clear()
self.processing = {addr: set() for addr in self.ncores}
self.stacks = {addr: list() for addr in self.ncores}
self.worker_queues = {addr: Queue() for addr in self.ncores}
self.coroutines = ([
self.scheduler(),
delete(self.scheduler_queue, self.delete_queue,
self.center.ip, self.center.port,
self.delete_batch_time)]
+ [worker(self.scheduler_queue, self.worker_queues[w], w, n)
for w, n in self.ncores.items()])
for cor in self.coroutines:
if cor.done():
raise cor.exception()
return All(self.coroutines)
@gen.coroutine
def _close(self):
self.scheduler_queue.put_nowait({'op': 'close'})
yield All(self.coroutines)
@gen.coroutine
def cleanup(self):
""" Clean up queues and coroutines, prepare to stop """
logger.debug("Cleaning up coroutines")
n = 0
self.delete_queue.put_nowait({'op': 'close'}); n += 1
for w, nc in self.ncores.items():
for i in range(nc):
self.worker_queues[w].put_nowait({'op': 'close'}); n += 1
for i in range(n):
yield self.scheduler_queue.get()
def mark_ready_to_run(self, key):
""" Send task to an appropriate worker, trigger worker """
logger.debug("Mark %s ready to run", key)
if key in self.waiting:
assert not self.waiting[key]
del self.waiting[key]
new_worker = decide_worker(self.dependencies, self.stacks,
self.who_has, self.restrictions, self.nbytes, key)
self.stacks[new_worker].append(key)
self.ensure_occupied(new_worker)
def mark_key_in_memory(self, key, workers=None):
logger.debug("Mark %s in memory", key)
if workers is None:
workers = self.who_has[key]
for worker in workers:
self.who_has[key].add(worker)
self.has_what[worker].add(key)
with ignoring(KeyError):
self.processing[worker].remove(key)
for dep in sorted(self.dependents.get(key, []), key=self.keyorder.get,
reverse=True):
if dep in self.waiting:
s = self.waiting[dep]
with ignoring(KeyError):
s.remove(key)
if not s: # new task ready to run
self.mark_ready_to_run(dep)
for dep in self.dependencies.get(key, []):
if dep in self.waiting_data:
s = self.waiting_data[dep]
with ignoring(KeyError):
s.remove(key)
if not s and dep:
self.release_key(dep)
self.report_queue.put_nowait({'op': 'key-in-memory',
'key': key,
'workers': workers})
def ensure_occupied(self, worker):
""" Spin up tasks on worker while it has tasks and free cores """
logger.debug('Ensure worker is occupied: %s', worker)
while (self.stacks[worker] and
self.ncores[worker] > len(self.processing[worker])):
key = self.stacks[worker].pop()
self.processing[worker].add(key)
logger.debug("Send job to worker: %s, %s, %s", worker, key, self.dask[key])
self.worker_queues[worker].put_nowait(
{'op': 'compute-task',
'key': key,
'task': self.dask[key],
'needed': self.dependencies[key]})
def seed_ready_tasks(self, keys=None):
""" Distribute leaves among workers
Takes an iterable of keys to consider for execution
"""
if keys is None:
keys = self.dask
new_stacks = assign_many_tasks(
self.dependencies, self.waiting, self.keyorder, self.who_has,
self.stacks, self.restrictions, self.nbytes,
[k for k in keys if k in self.waiting and not self.waiting[k]])
logger.debug("Seed ready tasks: %s", new_stacks)
for worker, stack in new_stacks.items():
if stack:
self.ensure_occupied(worker)
def release_key(self, key):
""" Release key from distributed memory if its ready """
logger.debug("Release key %s", key)
if key not in self.held_data and not self.waiting_data.get(key):
self.delete_queue.put_nowait({'op': 'delete-task',
'key': key})
for w in self.who_has[key]:
self.has_what[w].remove(key)
del self.who_has[key]
if key in self.waiting_data:
del self.waiting_data[key]
if key in self.in_play:
self.in_play.remove(key)
def update_data(self, extra_who_has, extra_nbytes):
logger.debug("Update data %s", extra_who_has)
for key, workers in extra_who_has.items():
self.mark_key_in_memory(key, workers)
self.nbytes.update(extra_nbytes)
self.held_data.update(extra_who_has)
self.in_play.update(extra_who_has)
def mark_failed(self, key, failing_key=None):
""" When a task fails mark it and all dependent task as failed """
logger.debug("Mark key as failed %s", key)
if key in self.exceptions_blame:
return
self.exceptions_blame[key] = failing_key
self.report_queue.put_nowait({'op': 'task-erred',
'key': key,
'exception': self.exceptions[failing_key],
'traceback': self.tracebacks[failing_key]})
if key in self.waiting:
del self.waiting[key]
if key in self.waiting_data:
del self.waiting_data[key]
self.in_play.remove(key)
for dep in self.dependents[key]:
self.mark_failed(dep, failing_key)
def log_state(self, msg=''):
logger.debug("Runtime State: %s", msg)
logger.debug('\n\nwaiting: %s\n\nstacks: %s\n\nprocessing: %s\n\n'
'in_play: %s\n\n', self.waiting, self.stacks, self.processing,
self.in_play)
def mark_worker_missing(self, worker):
logger.debug("Mark worker as missing %s", worker)
if worker not in self.processing:
return
keys = self.has_what.pop(worker)
for i in range(self.ncores[worker]): # send close message, in case not dead
self.worker_queues[worker].put_nowait({'op': 'close', 'report': False})
del self.worker_queues[worker]
del self.ncores[worker]
del self.stacks[worker]
del self.processing[worker]
if not self.stacks:
logger.critical("Lost all workers")
missing_keys = set()
for key in keys:
self.who_has[key].remove(worker)
if not self.who_has[key]:
missing_keys.add(key)
gone_data = {k for k, v in self.who_has.items() if not v}
self.in_play.difference_update(missing_keys)
for k in gone_data:
del self.who_has[k]
def heal_state(self):
""" Recover from catastrophic change """
logger.debug("Heal state")
self.log_state("Before Heal")
state = heal(self.dependencies, self.dependents, set(self.who_has),
self.stacks, self.processing, self.waiting, self.waiting_data)
released = state['released']
self.in_play.clear(); self.in_play.update(state['in_play'])
add_keys = {k for k, v in self.waiting.items() if not v}
for key in self.held_data & released:
self.report_queue.put_nowait({'op': 'lost-key', 'key': key})
if self.stacks:
for key in add_keys:
self.mark_ready_to_run(key)
for key in set(self.who_has) & released - self.held_data:
self.delete_queue.put_nowait({'op': 'delete-task', 'key': key})
self.in_play.update(self.who_has)
self.log_state("After Heal")
def my_heal_missing_data(self, missing):
logger.debug("Heal from missing data")
return heal_missing_data(self.dask, self.dependencies, self.dependents,
self.held_data, self.who_has, self.in_play, self.waiting,
self.waiting_data, missing)
@gen.coroutine
def scheduler(self):
""" The scheduler coroutine for dask scheduling
This coroutine manages interactions with all worker cores and with the
delete coroutine through queues.
Parameters
----------
scheduler_queue: tornado.queues.Queue
Get information from outside
report_queue: tornado.queues.Queue
Report information to outside
worker_queues: dict {worker: tornado.queues.Queue}
One queue per worker node.
Each queue is listened to by several worker_core coroutines.
delete_queue: tornado.queues.Queue
One queue listened to by ``delete`` which connects to the
center to delete unnecessary intermediate data
who_has: dict {key: set}
Mapping key to {set of worker-identities}
has_what: dict {worker: set}
Mapping worker-identity to {set of keys}
ncores: dict {worker: int}
Mapping worker-identity to number-of-cores
"""
assert (not self.dask) == (not self.dependencies), (self.dask, self.dependencies)
self.heal_state()
self.status = 'running'
self.report_queue.put_nowait({'op': 'start'})
while True:
msg = yield self.scheduler_queue.get()
logger.debug("scheduler receives message %s", msg)
if msg['op'] == 'close':
break
elif msg['op'] == 'update-graph':
update_state(self.dask, self.dependencies, self.dependents,
self.held_data, self.who_has, self.in_play,
self.waiting, self.waiting_data, msg['dsk'],
msg['keys'])
cover_aliases(self.dask, msg['dsk'])
self.restrictions.update(msg.get('restrictions', {}))
new_keyorder = order(msg['dsk']) # TODO: define order wrt old graph
for key in new_keyorder:
if key not in self.keyorder:
# TODO: add test for this
self.keyorder[key] = (self.generation, new_keyorder[key]) # prefer old
if len(msg['dsk']) > 1:
self.generation += 1 # older graph generations take precedence
for key in msg['dsk']:
for dep in self.dependencies[key]:
if dep in self.exceptions_blame:
self.mark_failed(key, self.exceptions_blame[dep])
self.seed_ready_tasks(msg['dsk'])
for key in msg['keys']:
if self.who_has[key]:
self.mark_key_in_memory(key)
elif msg['op'] == 'update-data':
self.update_data(msg['who-has'], msg['nbytes'])
elif msg['op'] == 'task-finished':
key, worker = msg['key'], msg['workers'][0]
logger.debug("Mark task as finished %s, %s", key, worker)
if key in self.processing[worker]:
self.nbytes[key] = msg['nbytes']
self.mark_key_in_memory(key, [worker])
self.ensure_occupied(worker)
else:
logger.debug("Key not found in processing, %s, %s, %s",
key, worker, self.processing[worker])
elif msg['op'] == 'task-erred':
key, worker = msg['key'], msg['worker']
if key in self.processing[worker]:
self.processing[worker].remove(key)
self.exceptions[key] = msg['exception']
self.tracebacks[key] = msg['traceback']
self.mark_failed(key, key)
self.ensure_occupied(worker)
elif msg['op'] in ('missing-data', 'task-missing-data'):
missing = set(msg['missing'])
logger.debug("Recovering missing data: %s", missing)
for k in missing:
with ignoring(KeyError):
workers = self.who_has.pop(k)
for worker in workers:
self.has_what[worker].remove(k)
self.my_heal_missing_data(missing)
if msg['op'] == 'task-missing-data':
key = msg['key']
with ignoring(KeyError):
self.processing[msg['worker']].remove(key)
self.waiting[key] = missing
logger.info('task missing data, %s, %s', key, self.waiting)
with ignoring(KeyError):
self.processing[msg['worker']].remove(msg['key'])
self.ensure_occupied(msg['worker'])
self.seed_ready_tasks()
elif msg['op'] == 'worker-failed':
worker = msg['worker']
self.mark_worker_missing(worker)
if msg.get('heal', True):
self.heal_state()
elif msg['op'] == 'release-held-data':
if msg['key'] in self.held_data:
logger.debug("Release key: %s", msg['key'])
self.held_data.remove(msg['key'])
self.release_key(msg['key'])
else:
logger.warn("Bad message: %s", msg)
logger.debug('Finished scheduling')
yield self.cleanup()
self.status = 'done'
class SQSDrain(object):
"""Implementation of IDrain that writes to an AWS SQS queue.
"""
def __init__(self, logger, loop, sqs_client,
metric_prefix='emitter'):
self.emitter = sqs_client
self.logger = logger
self.loop = loop
self.metric_prefix = metric_prefix
self.output_error = Event()
self.state = RUNNING
self.sender_tag = 'sender:%s.%s' % (self.__class__.__module__,
self.__class__.__name__)
self._send_queue = Queue()
self._should_flush_queue = Event()
self._flush_handle = None
self.loop.spawn_callback(self._onSend)
@gen.coroutine
def _flush_send_batch(self, batch_size):
send_batch = [
self._send_queue.get_nowait()
for pos in range(min(batch_size, self.emitter.max_messages))
]
try:
response = yield self.emitter.send_message_batch(*send_batch)
except SQSError as err:
self.logger.exception('Error encountered flushing data to SQS: %s',
err)
self.output_error.set()
for msg in send_batch:
self._send_queue.put_nowait(msg)
else:
if response.Failed:
self.output_error.set()
for req in response.Failed:
self.logger.error('Message failed to send: %s', req.Id)
self._send_queue.put_nowait(req)
@gen.coroutine
def _onSend(self):
respawn = True
while respawn:
qsize = self._send_queue.qsize()
# This will keep flushing until clear,
# including items that show up in between flushes
while qsize > 0:
try:
yield self._flush_send_batch(qsize)
except Exception as err:
self.logger.exception(err)
self.output_error.set()
qsize = self._send_queue.qsize()
# We've cleared the backlog, remove any possible future flush
if self._flush_handle:
self.loop.remove_timeout(self._flush_handle)
self._flush_handle = None
self._should_flush_queue.clear()
yield self._should_flush_queue.wait()
@gen.coroutine
def close(self, timeout=None):
self.state = CLOSING
yield self._send_queue.join(timeout)
def emit_nowait(self, msg):
if self._send_queue.qsize() >= self.emitter.max_messages:
# Signal flush
self._should_flush_queue.set()
raise QueueFull()
elif self._flush_handle is None:
# Ensure we flush messages at least by MAX_TIMEOUT
self._flush_handle = self.loop.add_timeout(
MAX_TIMEOUT,
lambda: self._should_flush_queue.set(),
)
self.logger.debug("Drain emitting")
self._send_queue.put_nowait(msg)
@gen.coroutine
def emit(self, msg, timeout=None):
if self._send_queue.qsize() >= self.emitter.max_messages:
# Signal flush
self._should_flush_queue.set()
elif self._flush_handle is None:
# Ensure we flush messages at least by MAX_TIMEOUT
self._flush_handle = self.loop.add_timeout(
MAX_TIMEOUT,
lambda: self._should_flush_queue.set(),
)
yield self._send_queue.put(msg, timeout)
class DebugpyMessageQueue:
HEADER = 'Content-Length: '
HEADER_LENGTH = 16
SEPARATOR = '\r\n\r\n'
SEPARATOR_LENGTH = 4
def __init__(self, event_callback, log):
self.tcp_buffer = ''
self._reset_tcp_pos()
self.event_callback = event_callback
self.message_queue = Queue()
self.log = log
def _reset_tcp_pos(self):
self.header_pos = -1
self.separator_pos = -1
self.message_size = 0
self.message_pos = -1
def _put_message(self, raw_msg):
self.log.debug('QUEUE - _put_message:')
msg = jsonapi.loads(raw_msg)
if msg['type'] == 'event':
self.log.debug('QUEUE - received event:')
self.log.debug(msg)
self.event_callback(msg)
else:
self.log.debug('QUEUE - put message:')
self.log.debug(msg)
self.message_queue.put_nowait(msg)
def put_tcp_frame(self, frame):
self.tcp_buffer += frame
self.log.debug('QUEUE - received frame')
while True:
# Finds header
if self.header_pos == -1:
self.header_pos = self.tcp_buffer.find(
DebugpyMessageQueue.HEADER)
if self.header_pos == -1:
return
self.log.debug('QUEUE - found header at pos %i', self.header_pos)
#Finds separator
if self.separator_pos == -1:
hint = self.header_pos + DebugpyMessageQueue.HEADER_LENGTH
self.separator_pos = self.tcp_buffer.find(
DebugpyMessageQueue.SEPARATOR, hint)
if self.separator_pos == -1:
return
self.log.debug('QUEUE - found separator at pos %i',
self.separator_pos)
if self.message_pos == -1:
size_pos = self.header_pos + DebugpyMessageQueue.HEADER_LENGTH
self.message_pos = self.separator_pos + DebugpyMessageQueue.SEPARATOR_LENGTH
self.message_size = int(
self.tcp_buffer[size_pos:self.separator_pos])
self.log.debug('QUEUE - found message at pos %i', self.message_pos)
self.log.debug('QUEUE - message size is %i', self.message_size)
if len(self.tcp_buffer) - self.message_pos < self.message_size:
return
self._put_message(
self.tcp_buffer[self.message_pos:self.message_pos +
self.message_size])
if len(self.tcp_buffer) - self.message_pos == self.message_size:
self.log.debug('QUEUE - resetting tcp_buffer')
self.tcp_buffer = ''
self._reset_tcp_pos()
return
else:
self.tcp_buffer = self.tcp_buffer[self.message_pos +
self.message_size:]
self.log.debug('QUEUE - slicing tcp_buffer: %s',
self.tcp_buffer)
self._reset_tcp_pos()
async def get_message(self):
return await self.message_queue.get()
class Kernel(SingletonConfigurable):
# ---------------------------------------------------------------------------
# Kernel interface
# ---------------------------------------------------------------------------
# attribute to override with a GUI
eventloop = Any(None)
@observe("eventloop")
def _update_eventloop(self, change):
"""schedule call to eventloop from IOLoop"""
loop = ioloop.IOLoop.current()
if change.new is not None:
loop.add_callback(self.enter_eventloop)
session = Instance(Session, allow_none=True)
profile_dir = Instance("IPython.core.profiledir.ProfileDir", allow_none=True)
shell_stream = Instance(ZMQStream, allow_none=True)
shell_streams = List(
help="""Deprecated shell_streams alias. Use shell_stream
.. versionchanged:: 6.0
shell_streams is deprecated. Use shell_stream.
"""
)
@default("shell_streams")
def _shell_streams_default(self):
warnings.warn(
"Kernel.shell_streams is deprecated in ipykernel 6.0. Use Kernel.shell_stream",
DeprecationWarning,
stacklevel=2,
)
if self.shell_stream is not None:
return [self.shell_stream]
else:
return []
@observe("shell_streams")
def _shell_streams_changed(self, change):
warnings.warn(
"Kernel.shell_streams is deprecated in ipykernel 6.0. Use Kernel.shell_stream",
DeprecationWarning,
stacklevel=2,
)
if len(change.new) > 1:
warnings.warn(
"Kernel only supports one shell stream. Additional streams will be ignored.",
RuntimeWarning,
stacklevel=2,
)
if change.new:
self.shell_stream = change.new[0]
control_stream = Instance(ZMQStream, allow_none=True)
debug_shell_socket = Any()
control_thread = Any()
iopub_socket = Any()
iopub_thread = Any()
stdin_socket = Any()
log = Instance(logging.Logger, allow_none=True)
# identities:
int_id = Integer(-1)
ident = Unicode()
@default("ident")
def _default_ident(self):
return str(uuid.uuid4())
# This should be overridden by wrapper kernels that implement any real
# language.
language_info = {}
# any links that should go in the help menu
help_links = List()
# Experimental option to break in non-user code.
# The ipykernel source is in the call stack, so the user
# has to manipulate the step-over and step-into in a wize way.
debug_just_my_code = Bool(
True,
help="""Set to False if you want to debug python standard and dependent libraries.
""",
).tag(config=True)
# track associations with current request
# Private interface
_darwin_app_nap = Bool(
True,
help="""Whether to use appnope for compatibility with OS X App Nap.
Only affects OS X >= 10.9.
""",
).tag(config=True)
# track associations with current request
_allow_stdin = Bool(False)
_parents = Dict({"shell": {}, "control": {}})
_parent_ident = Dict({"shell": b"", "control": b""})
@property
def _parent_header(self):
warnings.warn(
"Kernel._parent_header is deprecated in ipykernel 6. Use .get_parent()",
DeprecationWarning,
stacklevel=2,
)
return self.get_parent(channel="shell")
# Time to sleep after flushing the stdout/err buffers in each execute
# cycle. While this introduces a hard limit on the minimal latency of the
# execute cycle, it helps prevent output synchronization problems for
# clients.
# Units are in seconds. The minimum zmq latency on local host is probably
# ~150 microseconds, set this to 500us for now. We may need to increase it
# a little if it's not enough after more interactive testing.
_execute_sleep = Float(0.0005).tag(config=True)
# Frequency of the kernel's event loop.
# Units are in seconds, kernel subclasses for GUI toolkits may need to
# adapt to milliseconds.
_poll_interval = Float(0.01).tag(config=True)
stop_on_error_timeout = Float(
0.0,
config=True,
help="""time (in seconds) to wait for messages to arrive
when aborting queued requests after an error.
Requests that arrive within this window after an error
will be cancelled.
Increase in the event of unusually slow network
causing significant delays,
which can manifest as e.g. "Run all" in a notebook
aborting some, but not all, messages after an error.
""",
)
# If the shutdown was requested over the network, we leave here the
# necessary reply message so it can be sent by our registered atexit
# handler. This ensures that the reply is only sent to clients truly at
# the end of our shutdown process (which happens after the underlying
# IPython shell's own shutdown).
_shutdown_message = None
# This is a dict of port number that the kernel is listening on. It is set
# by record_ports and used by connect_request.
_recorded_ports = Dict()
# set of aborted msg_ids
aborted = Set()
# Track execution count here. For IPython, we override this to use the
# execution count we store in the shell.
execution_count = 0
msg_types = [
"execute_request",
"complete_request",
"inspect_request",
"history_request",
"comm_info_request",
"kernel_info_request",
"connect_request",
"shutdown_request",
"is_complete_request",
"interrupt_request",
# deprecated:
"apply_request",
]
# add deprecated ipyparallel control messages
control_msg_types = msg_types + [
"clear_request",
"abort_request",
"debug_request",
"usage_request",
]
def __init__(self, **kwargs):
super().__init__(**kwargs)
# Build dict of handlers for message types
self.shell_handlers = {}
for msg_type in self.msg_types:
self.shell_handlers[msg_type] = getattr(self, msg_type)
self.control_handlers = {}
for msg_type in self.control_msg_types:
self.control_handlers[msg_type] = getattr(self, msg_type)
self.control_queue = Queue()
def dispatch_control(self, msg):
self.control_queue.put_nowait(msg)
async def poll_control_queue(self):
while True:
msg = await self.control_queue.get()
# handle tracers from _flush_control_queue
if isinstance(msg, (concurrent.futures.Future, asyncio.Future)):
msg.set_result(None)
continue
await self.process_control(msg)
async def _flush_control_queue(self):
"""Flush the control queue, wait for processing of any pending messages"""
if self.control_thread:
control_loop = self.control_thread.io_loop
# concurrent.futures.Futures are threadsafe
# and can be used to await across threads
tracer_future = concurrent.futures.Future()
awaitable_future = asyncio.wrap_future(tracer_future)
else:
control_loop = self.io_loop
tracer_future = awaitable_future = asyncio.Future()
def _flush():
# control_stream.flush puts messages on the queue
self.control_stream.flush()
# put Future on the queue after all of those,
# so we can wait for all queued messages to be processed
self.control_queue.put(tracer_future)
control_loop.add_callback(_flush)
return awaitable_future
async def process_control(self, msg):
"""dispatch control requests"""
idents, msg = self.session.feed_identities(msg, copy=False)
try:
msg = self.session.deserialize(msg, content=True, copy=False)
except Exception:
self.log.error("Invalid Control Message", exc_info=True)
return
self.log.debug("Control received: %s", msg)
# Set the parent message for side effects.
self.set_parent(idents, msg, channel="control")
self._publish_status("busy", "control")
header = msg["header"]
msg_type = header["msg_type"]
handler = self.control_handlers.get(msg_type, None)
if handler is None:
self.log.error("UNKNOWN CONTROL MESSAGE TYPE: %r", msg_type)
else:
try:
result = handler(self.control_stream, idents, msg)
if inspect.isawaitable(result):
await result
except Exception:
self.log.error("Exception in control handler:", exc_info=True)
sys.stdout.flush()
sys.stderr.flush()
self._publish_status("idle", "control")
# flush to ensure reply is sent
self.control_stream.flush(zmq.POLLOUT)
def should_handle(self, stream, msg, idents):
"""Check whether a shell-channel message should be handled
Allows subclasses to prevent handling of certain messages (e.g. aborted requests).
"""
msg_id = msg["header"]["msg_id"]
if msg_id in self.aborted:
# is it safe to assume a msg_id will not be resubmitted?
self.aborted.remove(msg_id)
self._send_abort_reply(stream, msg, idents)
return False
return True
async def dispatch_shell(self, msg):
"""dispatch shell requests"""
# flush control queue before handling shell requests
await self._flush_control_queue()
idents, msg = self.session.feed_identities(msg, copy=False)
try:
msg = self.session.deserialize(msg, content=True, copy=False)
except Exception:
self.log.error("Invalid Message", exc_info=True)
return
# Set the parent message for side effects.
self.set_parent(idents, msg, channel="shell")
self._publish_status("busy", "shell")
msg_type = msg["header"]["msg_type"]
# Only abort execute requests
if self._aborting and msg_type == "execute_request":
self._send_abort_reply(self.shell_stream, msg, idents)
self._publish_status("idle", "shell")
# flush to ensure reply is sent before
# handling the next request
self.shell_stream.flush(zmq.POLLOUT)
return
# Print some info about this message and leave a '--->' marker, so it's
# easier to trace visually the message chain when debugging. Each
# handler prints its message at the end.
self.log.debug("\n*** MESSAGE TYPE:%s***", msg_type)
self.log.debug(" Content: %s\n --->\n ", msg["content"])
if not self.should_handle(self.shell_stream, msg, idents):
return
handler = self.shell_handlers.get(msg_type, None)
if handler is None:
self.log.warning("Unknown message type: %r", msg_type)
else:
self.log.debug("%s: %s", msg_type, msg)
try:
self.pre_handler_hook()
except Exception:
self.log.debug("Unable to signal in pre_handler_hook:", exc_info=True)
try:
result = handler(self.shell_stream, idents, msg)
if inspect.isawaitable(result):
await result
except Exception:
self.log.error("Exception in message handler:", exc_info=True)
except KeyboardInterrupt:
# Ctrl-c shouldn't crash the kernel here.
self.log.error("KeyboardInterrupt caught in kernel.")
finally:
try:
self.post_handler_hook()
except Exception:
self.log.debug("Unable to signal in post_handler_hook:", exc_info=True)
sys.stdout.flush()
sys.stderr.flush()
self._publish_status("idle", "shell")
# flush to ensure reply is sent before
# handling the next request
self.shell_stream.flush(zmq.POLLOUT)
def pre_handler_hook(self):
"""Hook to execute before calling message handler"""
# ensure default_int_handler during handler call
self.saved_sigint_handler = signal(SIGINT, default_int_handler)
def post_handler_hook(self):
"""Hook to execute after calling message handler"""
signal(SIGINT, self.saved_sigint_handler)
def enter_eventloop(self):
"""enter eventloop"""
self.log.info("Entering eventloop %s", self.eventloop)
# record handle, so we can check when this changes
eventloop = self.eventloop
if eventloop is None:
self.log.info("Exiting as there is no eventloop")
return
def advance_eventloop():
# check if eventloop changed:
if self.eventloop is not eventloop:
self.log.info("exiting eventloop %s", eventloop)
return
if self.msg_queue.qsize():
self.log.debug("Delaying eventloop due to waiting messages")
# still messages to process, make the eventloop wait
schedule_next()
return
self.log.debug("Advancing eventloop %s", eventloop)
try:
eventloop(self)
except KeyboardInterrupt:
# Ctrl-C shouldn't crash the kernel
self.log.error("KeyboardInterrupt caught in kernel")
pass
if self.eventloop is eventloop:
# schedule advance again
schedule_next()
def schedule_next():
"""Schedule the next advance of the eventloop"""
# flush the eventloop every so often,
# giving us a chance to handle messages in the meantime
self.log.debug("Scheduling eventloop advance")
self.io_loop.call_later(0.001, advance_eventloop)
# begin polling the eventloop
schedule_next()
async def do_one_iteration(self):
"""Process a single shell message
Any pending control messages will be flushed as well
.. versionchanged:: 5
This is now a coroutine
"""
# flush messages off of shell stream into the message queue
self.shell_stream.flush()
# process at most one shell message per iteration
await self.process_one(wait=False)
async def process_one(self, wait=True):
"""Process one request
Returns None if no message was handled.
"""
if wait:
t, dispatch, args = await self.msg_queue.get()
else:
try:
t, dispatch, args = self.msg_queue.get_nowait()
except (asyncio.QueueEmpty, QueueEmpty):
return None
await dispatch(*args)
async def dispatch_queue(self):
"""Coroutine to preserve order of message handling
Ensures that only one message is processing at a time,
even when the handler is async
"""
while True:
try:
await self.process_one()
except Exception:
self.log.exception("Error in message handler")
_message_counter = Any(
help="""Monotonic counter of messages
""",
)
@default("_message_counter")
def _message_counter_default(self):
return itertools.count()
def schedule_dispatch(self, dispatch, *args):
"""schedule a message for dispatch"""
idx = next(self._message_counter)
self.msg_queue.put_nowait(
(
idx,
dispatch,
args,
)
)
# ensure the eventloop wakes up
self.io_loop.add_callback(lambda: None)
def start(self):
"""register dispatchers for streams"""
self.io_loop = ioloop.IOLoop.current()
self.msg_queue = Queue()
self.io_loop.add_callback(self.dispatch_queue)
self.control_stream.on_recv(self.dispatch_control, copy=False)
if self.control_thread:
control_loop = self.control_thread.io_loop
else:
control_loop = self.io_loop
asyncio.run_coroutine_threadsafe(self.poll_control_queue(), control_loop.asyncio_loop)
self.shell_stream.on_recv(
partial(
self.schedule_dispatch,
self.dispatch_shell,
),
copy=False,
)
# publish idle status
self._publish_status("starting", "shell")
def record_ports(self, ports):
"""Record the ports that this kernel is using.
The creator of the Kernel instance must call this methods if they
want the :meth:`connect_request` method to return the port numbers.
"""
self._recorded_ports = ports
# ---------------------------------------------------------------------------
# Kernel request handlers
# ---------------------------------------------------------------------------
def _publish_execute_input(self, code, parent, execution_count):
"""Publish the code request on the iopub stream."""
self.session.send(
self.iopub_socket,
"execute_input",
{"code": code, "execution_count": execution_count},
parent=parent,
ident=self._topic("execute_input"),
)
def _publish_status(self, status, channel, parent=None):
"""send status (busy/idle) on IOPub"""
self.session.send(
self.iopub_socket,
"status",
{"execution_state": status},
parent=parent or self.get_parent(channel),
ident=self._topic("status"),
)
def _publish_debug_event(self, event):
self.session.send(
self.iopub_socket,
"debug_event",
event,
parent=self.get_parent("control"),
ident=self._topic("debug_event"),
)
def set_parent(self, ident, parent, channel="shell"):
"""Set the current parent request
Side effects (IOPub messages) and replies are associated with
the request that caused them via the parent_header.
The parent identity is used to route input_request messages
on the stdin channel.
"""
self._parent_ident[channel] = ident
self._parents[channel] = parent
def get_parent(self, channel="shell"):
"""Get the parent request associated with a channel.
.. versionadded:: 6
Parameters
----------
channel : str
the name of the channel ('shell' or 'control')
Returns
-------
message : dict
the parent message for the most recent request on the channel.
"""
return self._parents.get(channel, {})
def send_response(
self,
stream,
msg_or_type,
content=None,
ident=None,
buffers=None,
track=False,
header=None,
metadata=None,
channel="shell",
):
"""Send a response to the message we're currently processing.
This accepts all the parameters of :meth:`jupyter_client.session.Session.send`
except ``parent``.
This relies on :meth:`set_parent` having been called for the current
message.
"""
return self.session.send(
stream,
msg_or_type,
content,
self.get_parent(channel),
ident,
buffers,
track,
header,
metadata,
)
def init_metadata(self, parent):
"""Initialize metadata.
Run at the beginning of execution requests.
"""
# FIXME: `started` is part of ipyparallel
# Remove for ipykernel 5.0
return {
"started": now(),
}
def finish_metadata(self, parent, metadata, reply_content):
"""Finish populating metadata.
Run after completing an execution request.
"""
return metadata
async def execute_request(self, stream, ident, parent):
"""handle an execute_request"""
try:
content = parent["content"]
code = content["code"]
silent = content["silent"]
store_history = content.get("store_history", not silent)
user_expressions = content.get("user_expressions", {})
allow_stdin = content.get("allow_stdin", False)
except Exception:
self.log.error("Got bad msg: ")
self.log.error("%s", parent)
return
stop_on_error = content.get("stop_on_error", True)
metadata = self.init_metadata(parent)
# Re-broadcast our input for the benefit of listening clients, and
# start computing output
if not silent:
self.execution_count += 1
self._publish_execute_input(code, parent, self.execution_count)
cell_id = (parent.get("metadata") or {}).get("cellId")
if _accepts_cell_id(self.do_execute):
reply_content = self.do_execute(
code,
silent,
store_history,
user_expressions,
allow_stdin,
cell_id=cell_id,
)
else:
reply_content = self.do_execute(
code,
silent,
store_history,
user_expressions,
allow_stdin,
)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
# Flush output before sending the reply.
sys.stdout.flush()
sys.stderr.flush()
# FIXME: on rare occasions, the flush doesn't seem to make it to the
# clients... This seems to mitigate the problem, but we definitely need
# to better understand what's going on.
if self._execute_sleep:
time.sleep(self._execute_sleep)
# Send the reply.
reply_content = json_clean(reply_content)
metadata = self.finish_metadata(parent, metadata, reply_content)
reply_msg = self.session.send(
stream,
"execute_reply",
reply_content,
parent,
metadata=metadata,
ident=ident,
)
self.log.debug("%s", reply_msg)
if not silent and reply_msg["content"]["status"] == "error" and stop_on_error:
self._abort_queues()
def do_execute(
self,
code,
silent,
store_history=True,
user_expressions=None,
allow_stdin=False,
*,
cell_id=None,
):
"""Execute user code. Must be overridden by subclasses."""
raise NotImplementedError
async def complete_request(self, stream, ident, parent):
content = parent["content"]
code = content["code"]
cursor_pos = content["cursor_pos"]
matches = self.do_complete(code, cursor_pos)
if inspect.isawaitable(matches):
matches = await matches
matches = json_clean(matches)
self.session.send(stream, "complete_reply", matches, parent, ident)
def do_complete(self, code, cursor_pos):
"""Override in subclasses to find completions."""
return {
"matches": [],
"cursor_end": cursor_pos,
"cursor_start": cursor_pos,
"metadata": {},
"status": "ok",
}
async def inspect_request(self, stream, ident, parent):
content = parent["content"]
reply_content = self.do_inspect(
content["code"],
content["cursor_pos"],
content.get("detail_level", 0),
set(content.get("omit_sections", [])),
)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
# Before we send this object over, we scrub it for JSON usage
reply_content = json_clean(reply_content)
msg = self.session.send(stream, "inspect_reply", reply_content, parent, ident)
self.log.debug("%s", msg)
def do_inspect(self, code, cursor_pos, detail_level=0, omit_sections=()):
"""Override in subclasses to allow introspection."""
return {"status": "ok", "data": {}, "metadata": {}, "found": False}
async def history_request(self, stream, ident, parent):
content = parent["content"]
reply_content = self.do_history(**content)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
reply_content = json_clean(reply_content)
msg = self.session.send(stream, "history_reply", reply_content, parent, ident)
self.log.debug("%s", msg)
def do_history(
self,
hist_access_type,
output,
raw,
session=None,
start=None,
stop=None,
n=None,
pattern=None,
unique=False,
):
"""Override in subclasses to access history."""
return {"status": "ok", "history": []}
async def connect_request(self, stream, ident, parent):
if self._recorded_ports is not None:
content = self._recorded_ports.copy()
else:
content = {}
content["status"] = "ok"
msg = self.session.send(stream, "connect_reply", content, parent, ident)
self.log.debug("%s", msg)
@property
def kernel_info(self):
return {
"protocol_version": kernel_protocol_version,
"implementation": self.implementation,
"implementation_version": self.implementation_version,
"language_info": self.language_info,
"banner": self.banner,
"help_links": self.help_links,
}
async def kernel_info_request(self, stream, ident, parent):
content = {"status": "ok"}
content.update(self.kernel_info)
msg = self.session.send(stream, "kernel_info_reply", content, parent, ident)
self.log.debug("%s", msg)
async def comm_info_request(self, stream, ident, parent):
content = parent["content"]
target_name = content.get("target_name", None)
# Should this be moved to ipkernel?
if hasattr(self, "comm_manager"):
comms = {
k: dict(target_name=v.target_name)
for (k, v) in self.comm_manager.comms.items()
if v.target_name == target_name or target_name is None
}
else:
comms = {}
reply_content = dict(comms=comms, status="ok")
msg = self.session.send(stream, "comm_info_reply", reply_content, parent, ident)
self.log.debug("%s", msg)
def _send_interupt_children(self):
if os.name == "nt":
self.log.error("Interrupt message not supported on Windows")
else:
pid = os.getpid()
pgid = os.getpgid(pid)
# Prefer process-group over process
# but only if the kernel is the leader of the process group
if pgid and pgid == pid and hasattr(os, "killpg"):
try:
os.killpg(pgid, SIGINT)
return
except OSError:
pass
try:
os.kill(pid, SIGINT)
except OSError:
pass
async def interrupt_request(self, stream, ident, parent):
self._send_interupt_children()
content = parent["content"]
self.session.send(stream, "interrupt_reply", content, parent, ident=ident)
return
async def shutdown_request(self, stream, ident, parent):
content = self.do_shutdown(parent["content"]["restart"])
if inspect.isawaitable(content):
content = await content
self.session.send(stream, "shutdown_reply", content, parent, ident=ident)
# same content, but different msg_id for broadcasting on IOPub
self._shutdown_message = self.session.msg("shutdown_reply", content, parent)
await self._at_shutdown()
self.log.debug("Stopping control ioloop")
control_io_loop = self.control_stream.io_loop
control_io_loop.add_callback(control_io_loop.stop)
self.log.debug("Stopping shell ioloop")
shell_io_loop = self.shell_stream.io_loop
shell_io_loop.add_callback(shell_io_loop.stop)
def do_shutdown(self, restart):
"""Override in subclasses to do things when the frontend shuts down the
kernel.
"""
return {"status": "ok", "restart": restart}
async def is_complete_request(self, stream, ident, parent):
content = parent["content"]
code = content["code"]
reply_content = self.do_is_complete(code)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
reply_content = json_clean(reply_content)
reply_msg = self.session.send(stream, "is_complete_reply", reply_content, parent, ident)
self.log.debug("%s", reply_msg)
def do_is_complete(self, code):
"""Override in subclasses to find completions."""
return {"status": "unknown"}
async def debug_request(self, stream, ident, parent):
content = parent["content"]
reply_content = self.do_debug_request(content)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
reply_content = json_clean(reply_content)
reply_msg = self.session.send(stream, "debug_reply", reply_content, parent, ident)
self.log.debug("%s", reply_msg)
# Taken from https://github.com/jupyter-server/jupyter-resource-usage/blob/e6ec53fa69fdb6de8e878974bcff006310658408/jupyter_resource_usage/metrics.py#L16
def get_process_metric_value(self, process, name, attribute=None):
try:
# psutil.Process methods will either return...
metric_value = getattr(process, name)()
if attribute is not None: # ... a named tuple
return getattr(metric_value, attribute)
else: # ... or a number
return metric_value
# Avoid littering logs with stack traces
# complaining about dead processes
except BaseException:
return None
async def usage_request(self, stream, ident, parent):
reply_content = {"hostname": socket.gethostname()}
current_process = psutil.Process()
all_processes = [current_process] + current_process.children(recursive=True)
process_metric_value = self.get_process_metric_value
reply_content["kernel_cpu"] = sum(
[process_metric_value(process, "cpu_percent", None) for process in all_processes]
)
reply_content["kernel_memory"] = sum(
[process_metric_value(process, "memory_info", "rss") for process in all_processes]
)
cpu_percent = psutil.cpu_percent()
# https://psutil.readthedocs.io/en/latest/index.html?highlight=cpu#psutil.cpu_percent
# The first time cpu_percent is called it will return a meaningless 0.0 value which you are supposed to ignore.
if cpu_percent is not None and cpu_percent != 0.0:
reply_content["host_cpu_percent"] = cpu_percent
reply_content["host_virtual_memory"] = dict(psutil.virtual_memory()._asdict())
reply_msg = self.session.send(stream, "usage_reply", reply_content, parent, ident)
self.log.debug("%s", reply_msg)
async def do_debug_request(self, msg):
raise NotImplementedError
# ---------------------------------------------------------------------------
# Engine methods (DEPRECATED)
# ---------------------------------------------------------------------------
async def apply_request(self, stream, ident, parent):
self.log.warning("apply_request is deprecated in kernel_base, moving to ipyparallel.")
try:
content = parent["content"]
bufs = parent["buffers"]
msg_id = parent["header"]["msg_id"]
except Exception:
self.log.error("Got bad msg: %s", parent, exc_info=True)
return
md = self.init_metadata(parent)
reply_content, result_buf = self.do_apply(content, bufs, msg_id, md)
# flush i/o
sys.stdout.flush()
sys.stderr.flush()
md = self.finish_metadata(parent, md, reply_content)
self.session.send(
stream,
"apply_reply",
reply_content,
parent=parent,
ident=ident,
buffers=result_buf,
metadata=md,
)
def do_apply(self, content, bufs, msg_id, reply_metadata):
"""DEPRECATED"""
raise NotImplementedError
# ---------------------------------------------------------------------------
# Control messages (DEPRECATED)
# ---------------------------------------------------------------------------
async def abort_request(self, stream, ident, parent):
"""abort a specific msg by id"""
self.log.warning(
"abort_request is deprecated in kernel_base. It is only part of IPython parallel"
)
msg_ids = parent["content"].get("msg_ids", None)
if isinstance(msg_ids, str):
msg_ids = [msg_ids]
if not msg_ids:
self._abort_queues()
for mid in msg_ids:
self.aborted.add(str(mid))
content = dict(status="ok")
reply_msg = self.session.send(
stream, "abort_reply", content=content, parent=parent, ident=ident
)
self.log.debug("%s", reply_msg)
async def clear_request(self, stream, idents, parent):
"""Clear our namespace."""
self.log.warning(
"clear_request is deprecated in kernel_base. It is only part of IPython parallel"
)
content = self.do_clear()
self.session.send(stream, "clear_reply", ident=idents, parent=parent, content=content)
def do_clear(self):
"""DEPRECATED since 4.0.3"""
raise NotImplementedError
# ---------------------------------------------------------------------------
# Protected interface
# ---------------------------------------------------------------------------
def _topic(self, topic):
"""prefixed topic for IOPub messages"""
base = "kernel.%s" % self.ident
return ("%s.%s" % (base, topic)).encode()
_aborting = Bool(False)
def _abort_queues(self):
# while this flag is true,
# execute requests will be aborted
self._aborting = True
self.log.info("Aborting queue")
# flush streams, so all currently waiting messages
# are added to the queue
self.shell_stream.flush()
# Callback to signal that we are done aborting
# dispatch functions _must_ be async
async def stop_aborting():
self.log.info("Finishing abort")
self._aborting = False
# put the stop-aborting event on the message queue
# so that all messages already waiting in the queue are aborted
# before we reset the flag
schedule_stop_aborting = partial(self.schedule_dispatch, stop_aborting)
# if we have a delay, give messages this long to arrive on the queue
# before we stop aborting requests
asyncio.get_event_loop().call_later(self.stop_on_error_timeout, schedule_stop_aborting)
def _send_abort_reply(self, stream, msg, idents):
"""Send a reply to an aborted request"""
self.log.info(f"Aborting {msg['header']['msg_id']}: {msg['header']['msg_type']}")
reply_type = msg["header"]["msg_type"].rsplit("_", 1)[0] + "_reply"
status = {"status": "aborted"}
md = self.init_metadata(msg)
md = self.finish_metadata(msg, md, status)
md.update(status)
self.session.send(
stream,
reply_type,
metadata=md,
content=status,
parent=msg,
ident=idents,
)
def _no_raw_input(self):
"""Raise StdinNotImplementedError if active frontend doesn't support
stdin."""
raise StdinNotImplementedError(
"raw_input was called, but this frontend does not support stdin."
)
def getpass(self, prompt="", stream=None):
"""Forward getpass to frontends
Raises
------
StdinNotImplementedError if active frontend doesn't support stdin.
"""
if not self._allow_stdin:
raise StdinNotImplementedError(
"getpass was called, but this frontend does not support input requests."
)
if stream is not None:
import warnings
warnings.warn(
"The `stream` parameter of `getpass.getpass` will have no effect when using ipykernel",
UserWarning,
stacklevel=2,
)
return self._input_request(
prompt,
self._parent_ident["shell"],
self.get_parent("shell"),
password=True,
)
def raw_input(self, prompt=""):
"""Forward raw_input to frontends
Raises
------
StdinNotImplementedError if active frontend doesn't support stdin.
"""
if not self._allow_stdin:
raise StdinNotImplementedError(
"raw_input was called, but this frontend does not support input requests."
)
return self._input_request(
str(prompt),
self._parent_ident["shell"],
self.get_parent("shell"),
password=False,
)
def _input_request(self, prompt, ident, parent, password=False):
# Flush output before making the request.
sys.stderr.flush()
sys.stdout.flush()
# flush the stdin socket, to purge stale replies
while True:
try:
self.stdin_socket.recv_multipart(zmq.NOBLOCK)
except zmq.ZMQError as e:
if e.errno == zmq.EAGAIN:
break
else:
raise
# Send the input request.
content = json_clean(dict(prompt=prompt, password=password))
self.session.send(self.stdin_socket, "input_request", content, parent, ident=ident)
# Await a response.
while True:
try:
# Use polling with select() so KeyboardInterrupts can get
# through; doing a blocking recv() means stdin reads are
# uninterruptible on Windows. We need a timeout because
# zmq.select() is also uninterruptible, but at least this
# way reads get noticed immediately and KeyboardInterrupts
# get noticed fairly quickly by human response time standards.
rlist, _, xlist = zmq.select([self.stdin_socket], [], [self.stdin_socket], 0.01)
if rlist or xlist:
ident, reply = self.session.recv(self.stdin_socket)
if (ident, reply) != (None, None):
break
except KeyboardInterrupt:
# re-raise KeyboardInterrupt, to truncate traceback
raise KeyboardInterrupt("Interrupted by user") from None
except Exception:
self.log.warning("Invalid Message:", exc_info=True)
try:
value = reply["content"]["value"]
except Exception:
self.log.error("Bad input_reply: %s", parent)
value = ""
if value == "\x04":
# EOF
raise EOFError
return value
def _signal_children(self, signum):
"""
Send a signal to all our children
Like `killpg`, but does not include the current process
(or possible parents).
"""
for p in self._process_children():
self.log.debug(f"Sending {Signals(signum)!r} to subprocess {p}")
try:
if signum == SIGTERM:
p.terminate()
elif signum == SIGKILL:
p.kill()
else:
p.send_signal(signum)
except psutil.NoSuchProcess:
pass
def _process_children(self):
"""Retrieve child processes in the kernel's process group
Avoids:
- including parents and self with killpg
- including all children that may have forked-off a new group
"""
kernel_process = psutil.Process()
all_children = kernel_process.children(recursive=True)
if os.name == "nt":
return all_children
kernel_pgid = os.getpgrp()
process_group_children = []
for child in all_children:
try:
child_pgid = os.getpgid(child.pid)
except OSError:
pass
else:
if child_pgid == kernel_pgid:
process_group_children.append(child)
return process_group_children
async def _progressively_terminate_all_children(self):
sleeps = (0.01, 0.03, 0.1, 0.3, 1, 3, 10)
if not self._process_children():
self.log.debug("Kernel has no children.")
return
for signum in (SIGTERM, SIGKILL):
for delay in sleeps:
children = self._process_children()
if not children:
self.log.debug("No more children, continuing shutdown routine.")
return
# signals only children, not current process
self._signal_children(signum)
self.log.debug(
f"Will sleep {delay}s before checking for children and retrying. {children}"
)
await asyncio.sleep(delay)
async def _at_shutdown(self):
"""Actions taken at shutdown by the kernel, called by python's atexit."""
try:
await self._progressively_terminate_all_children()
except Exception as e:
self.log.exception("Exception during subprocesses termination %s", e)
finally:
if self._shutdown_message is not None:
self.session.send(
self.iopub_socket,
self._shutdown_message,
ident=self._topic("shutdown"),
)
self.log.debug("%s", self._shutdown_message)
self.control_stream.flush(zmq.POLLOUT)
class Worker(Server):
""" Worker Node
Workers perform two functions:
1. **Serve data** from a local dictionary
2. **Perform computation** on that data and on data from peers
Additionally workers keep a Center informed of their data and use that
Center to gather data from other workers when necessary to perform a
computation.
You can start a worker with the ``dworker`` command line application::
$ dworker scheduler-ip:port
**State**
* **data:** ``{key: object}``:
Dictionary mapping keys to actual values
* **active:** ``{key}``:
Set of keys currently under computation
* **ncores:** ``int``:
Number of cores used by this worker process
* **executor:** ``concurrent.futures.ThreadPoolExecutor``:
Executor used to perform computation
* **local_dir:** ``path``:
Path on local machine to store temporary files
* **center:** ``rpc``:
Location of center or scheduler. See ``.ip/.port`` attributes.
* **name:** ``string``:
Alias
* **services:** ``{str: Server}``:
Auxiliary web servers running on this worker
* **service_ports:** ``{str: port}``:
Examples
--------
Create centers and workers in Python:
>>> from distributed import Center, Worker
>>> c = Center('192.168.0.100', 8787) # doctest: +SKIP
>>> w = Worker(c.ip, c.port) # doctest: +SKIP
>>> yield w._start(port=8788) # doctest: +SKIP
Or use the command line::
$ dcenter
Start center at 127.0.0.1:8787
$ dworker 127.0.0.1:8787
Start worker at: 127.0.0.1:8788
Registered with center at: 127.0.0.1:8787
See Also
--------
distributed.center.Center:
"""
def __init__(self, center_ip, center_port, ip=None, ncores=None,
loop=None, local_dir=None, services=None, service_ports=None,
name=None, **kwargs):
self.ip = ip or get_ip()
self._port = 0
self.ncores = ncores or _ncores
self.data = dict()
self.loop = loop or IOLoop.current()
self.status = None
self.local_dir = local_dir or tempfile.mkdtemp(prefix='worker-')
self.executor = ThreadPoolExecutor(self.ncores)
self.thread_tokens = Queue() # https://github.com/tornadoweb/tornado/issues/1595#issuecomment-198551572
for i in range(self.ncores):
self.thread_tokens.put_nowait(i)
self.center = rpc(ip=center_ip, port=center_port)
self.active = set()
self.name = name
if not os.path.exists(self.local_dir):
os.mkdir(self.local_dir)
if self.local_dir not in sys.path:
sys.path.insert(0, self.local_dir)
self.services = {}
self.service_ports = service_ports or {}
for k, v in (services or {}).items():
if isinstance(k, tuple):
k, port = k
else:
port = 0
self.services[k] = v(self)
self.services[k].listen(port)
self.service_ports[k] = self.services[k].port
handlers = {'compute': self.compute,
'gather': self.gather,
'compute-stream': self.compute_stream,
'run': self.run,
'get_data': self.get_data,
'update_data': self.update_data,
'delete_data': self.delete_data,
'terminate': self.terminate,
'ping': pingpong,
'health': self.health,
'upload_file': self.upload_file}
super(Worker, self).__init__(handlers, **kwargs)
@gen.coroutine
def _start(self, port=0):
self.listen(port)
self.name = self.name or self.address
for k, v in self.services.items():
v.listen(0)
self.service_ports[k] = v.port
logger.info(' Start worker at: %20s:%d', self.ip, self.port)
for k, v in self.service_ports.items():
logger.info(' %16s at: %20s:%d' % (k, self.ip, v))
logger.info('Waiting to connect to: %20s:%d',
self.center.ip, self.center.port)
while True:
try:
resp = yield self.center.register(
ncores=self.ncores, address=(self.ip, self.port),
keys=list(self.data), services=self.service_ports,
name=self.name)
break
except (OSError, StreamClosedError):
logger.debug("Unable to register with scheduler. Waiting")
yield gen.sleep(0.5)
if resp != 'OK':
raise ValueError(resp)
logger.info(' Registered to: %20s:%d',
self.center.ip, self.center.port)
self.status = 'running'
def start(self, port=0):
self.loop.add_callback(self._start, port)
def identity(self, stream):
return {'type': type(self).__name__, 'id': self.id,
'center': (self.center.ip, self.center.port)}
@gen.coroutine
def _close(self, report=True, timeout=10):
if report:
yield gen.with_timeout(timedelta(seconds=timeout),
self.center.unregister(address=(self.ip, self.port)),
io_loop=self.loop)
self.center.close_streams()
self.stop()
self.executor.shutdown()
if os.path.exists(self.local_dir):
shutil.rmtree(self.local_dir)
for k, v in self.services.items():
v.stop()
self.status = 'closed'
self.stop()
@gen.coroutine
def terminate(self, stream, report=True):
yield self._close(report=report)
raise Return('OK')
@property
def address(self):
return '%s:%d' % (self.ip, self.port)
@property
def address_tuple(self):
return (self.ip, self.port)
@gen.coroutine
def gather(self, stream=None, who_has=None):
who_has = {k: [coerce_to_address(addr) for addr in v]
for k, v in who_has.items()
if k not in self.data}
try:
result = yield gather_from_workers(who_has)
except KeyError as e:
logger.warn("Could not find data", e)
raise Return({'status': 'missing-data',
'keys': e.args})
else:
self.data.update(result)
raise Return({'status': 'OK'})
@gen.coroutine
def _ready_task(self, function=None, key=None, args=(), kwargs={},
task=None, who_has=None):
diagnostics = {}
if who_has:
local_data = {k: self.data[k] for k in who_has if k in self.data}
who_has = {k: set(map(coerce_to_address, v))
for k, v in who_has.items()
if k not in self.data}
try:
logger.info("gather %d keys from peers: %s",
len(who_has), str(who_has))
diagnostics['transfer-start'] = time()
other = yield gather_from_workers(who_has)
diagnostics['transfer-stop'] = time()
data = merge(local_data, other)
except KeyError as e:
logger.warn("Could not find data for %s", key)
raise Return({'status': 'missing-data',
'keys': e.args,
'key': key})
else:
data = {}
transfer_time = 0
try:
start = default_timer()
if task is not None:
task = loads(task)
if function is not None:
function = loads(function)
if args:
args = loads(args)
if kwargs:
kwargs = loads(kwargs)
diagnostics['deserialization'] = default_timer() - start
except Exception as e:
logger.warn("Could not deserialize task", exc_info=True)
raise Return(assoc(error_message(e), 'key', key))
if task is not None:
assert not function and not args and not kwargs
function = execute_task
args = (task,)
# Fill args with data
args2 = pack_data(args, data)
kwargs2 = pack_data(kwargs, data)
raise Return({'status': 'OK',
'function': function,
'args': args2,
'kwargs': kwargs2,
'diagnostics': diagnostics,
'key': key})
@gen.coroutine
def executor_submit(self, key, function, *args, **kwargs):
""" Safely run function in thread pool executor
We've run into issues running concurrent.future futures within
tornado. Apparently it's advantageous to use timeouts and periodic
callbacks to ensure things run smoothly. This can get tricky, so we
pull it off into an separate method.
"""
token = yield self.thread_tokens.get()
job_counter[0] += 1
i = job_counter[0]
# logger.info("%s:%d Starts job %d, %s", self.ip, self.port, i, key)
future = self.executor.submit(function, *args, **kwargs)
pc = PeriodicCallback(lambda: logger.debug("future state: %s - %s",
key, future._state), 1000); pc.start()
try:
if sys.version_info < (3, 2):
yield future
else:
while not future.done() and future._state != 'FINISHED':
try:
yield gen.with_timeout(timedelta(seconds=1), future,
io_loop=self.loop)
break
except gen.TimeoutError:
logger.info("work queue size: %d", self.executor._work_queue.qsize())
logger.info("future state: %s", future._state)
logger.info("Pending job %d: %s", i, future)
finally:
pc.stop()
self.thread_tokens.put(token)
result = future.result()
logger.info("Finish job %d, %s", i, key)
raise gen.Return(result)
@gen.coroutine
def compute_stream(self, stream):
with log_errors():
logger.debug("Open compute stream")
bstream = BatchedSend(interval=10, loop=self.loop)
bstream.start(stream)
@gen.coroutine
def process(msg):
try:
result = yield self.compute(report=False, **msg)
bstream.send(result)
except Exception as e:
logger.exception(e)
bstream.send(assoc(error_message(e), 'key', msg.get('key')))
with log_errors():
while True:
try:
msgs = yield read(stream)
except StreamClosedError:
break
if not isinstance(msgs, list):
msgs = [msgs]
for msg in msgs:
op = msg.pop('op', None)
if op == 'close':
break
elif op == 'compute-task':
self.loop.add_callback(process, msg)
else:
logger.warning("Unknown operation %s, %s", op, msg)
yield bstream.close()
logger.info("Close compute stream")
@gen.coroutine
def compute(self, stream=None, function=None, key=None, args=(), kwargs={},
task=None, who_has=None, report=True):
""" Execute function """
self.active.add(key)
# Ready function for computation
msg = yield self._ready_task(function=function, key=key, args=args,
kwargs=kwargs, task=task, who_has=who_has)
if msg['status'] != 'OK':
try:
self.active.remove(key)
except KeyError:
pass
raise Return(msg)
else:
function = msg['function']
args = msg['args']
kwargs = msg['kwargs']
# Log and compute in separate thread
result = yield self.executor_submit(key, apply_function, function,
args, kwargs)
result['key'] = key
result.update(msg['diagnostics'])
if result['status'] == 'OK':
self.data[key] = result.pop('result')
if report:
response = yield self.center.add_keys(address=(self.ip, self.port),
keys=[key])
if not response == 'OK':
logger.warn('Could not report results to center: %s',
str(response))
else:
logger.warn(" Compute Failed\n"
"Function: %s\n"
"args: %s\n"
"kwargs: %s\n",
str(funcname(function))[:1000], str(args)[:1000],
str(kwargs)[:1000], exc_info=True)
logger.debug("Send compute response to scheduler: %s, %s", key, msg)
try:
self.active.remove(key)
except KeyError:
pass
raise Return(result)
@gen.coroutine
def run(self, stream, function=None, args=(), kwargs={}):
function = loads(function)
if args:
args = loads(args)
if kwargs:
kwargs = loads(kwargs)
try:
result = function(*args, **kwargs)
except Exception as e:
logger.warn(" Run Failed\n"
"Function: %s\n"
"args: %s\n"
"kwargs: %s\n",
str(funcname(function))[:1000], str(args)[:1000],
str(kwargs)[:1000], exc_info=True)
response = error_message(e)
else:
response = {
'status': 'OK',
'result': dumps(result),
}
raise Return(response)
@gen.coroutine
def update_data(self, stream, data=None, report=True):
data = valmap(loads, data)
self.data.update(data)
if report:
response = yield self.center.add_keys(address=(self.ip, self.port),
keys=list(data))
assert response == 'OK'
info = {'nbytes': {k: sizeof(v) for k, v in data.items()},
'status': 'OK'}
raise Return(info)
@gen.coroutine
def delete_data(self, stream, keys=None, report=True):
for key in keys:
if key in self.data:
del self.data[key]
logger.info("Deleted %d keys", len(keys))
if report:
logger.debug("Reporting loss of keys to center")
yield self.center.remove_keys(address=self.address,
keys=list(keys))
raise Return('OK')
def get_data(self, stream, keys=None):
return {k: dumps(self.data[k]) for k in keys if k in self.data}
def upload_file(self, stream, filename=None, data=None, load=True):
out_filename = os.path.join(self.local_dir, filename)
if isinstance(data, unicode):
data = data.encode()
with open(out_filename, 'wb') as f:
f.write(data)
f.flush()
if load:
try:
name, ext = os.path.splitext(filename)
if ext in ('.py', '.pyc'):
logger.info("Reload module %s from .py file", name)
name = name.split('-')[0]
reload(import_module(name))
if ext == '.egg':
sys.path.append(out_filename)
pkgs = pkg_resources.find_distributions(out_filename)
for pkg in pkgs:
logger.info("Load module %s from egg", pkg.project_name)
reload(import_module(pkg.project_name))
if not pkgs:
logger.warning("Found no packages in egg file")
except Exception as e:
logger.exception(e)
return {'status': 'error', 'exception': dumps(e)}
return {'status': 'OK', 'nbytes': len(data)}
def health(self, stream=None):
""" Information about worker """
d = {'active': len(self.active),
'stored': len(self.data),
'time': time()}
try:
import psutil
mem = psutil.virtual_memory()
d.update({'cpu': psutil.cpu_percent(),
'memory': mem.total,
'memory-percent': mem.percent})
try:
net_io = psutil.net_io_counters()
d['network-send'] = net_io.bytes_sent - self._last_net_io.bytes_sent
d['network-recv'] = net_io.bytes_recv - self._last_net_io.bytes_recv
except AttributeError:
pass
self._last_net_io = net_io
try:
disk_io = psutil.disk_io_counters()
d['disk-read'] = disk_io.read_bytes - self._last_disk_io.read_bytes
d['disk-write'] = disk_io.write_bytes - self._last_disk_io.write_bytes
except (AttributeError, RuntimeError):
disk_io = None
self._last_disk_io = disk_io
except ImportError:
pass
return d
class Scheduler(object):
def __init__(self, center, delete_batch_time=1, loop=None,
resource_interval=1, resource_log_size=1000):
self.scheduler_queues = [Queue()]
self.report_queues = []
self.delete_queue = Queue()
self.status = None
self.coroutines = []
self.center = coerce_to_rpc(center)
self.dask = dict()
self.dependencies = dict()
self.dependents = dict()
self.generation = 0
self.has_what = defaultdict(set)
self.held_data = set()
self.in_play = set()
self.keyorder = dict()
self.nbytes = dict()
self.ncores = dict()
self.nannies = dict()
self.processing = dict()
self.restrictions = dict()
self.stacks = dict()
self.waiting = dict()
self.waiting_data = dict()
self.who_has = defaultdict(set)
self.exceptions = dict()
self.tracebacks = dict()
self.exceptions_blame = dict()
self.resource_logs = dict()
self.loop = loop or IOLoop.current()
self.delete_batch_time = delete_batch_time
self.resource_interval = resource_interval
self.resource_log_size = resource_log_size
self.plugins = []
self.handlers = {'update-graph': self.update_graph,
'update-data': self.update_data,
'missing-data': self.mark_missing_data,
'task-missing-data': self.mark_missing_data,
'worker-failed': self.mark_worker_missing,
'release-held-data': self.release_held_data,
'restart': self._restart}
def put(self, msg):
return self.scheduler_queues[0].put_nowait(msg)
@property
def report_queue(self):
return self.report_queues[0]
@gen.coroutine
def _sync_center(self):
self.ncores, self.has_what, self.who_has, self.nannies = yield [
self.center.ncores(),
self.center.has_what(),
self.center.who_has(),
self.center.nannies()]
self._nanny_coroutines = []
for (ip, wport), nport in self.nannies.items():
if not nport:
continue
if (ip, nport) not in self.resource_logs:
self.resource_logs[(ip, nport)] = deque(maxlen=self.resource_log_size)
self._nanny_coroutines.append(self._nanny_listen(ip, nport))
def start(self, start_queues=True):
collections = [self.dask, self.dependencies, self.dependents,
self.waiting, self.waiting_data, self.in_play, self.keyorder,
self.nbytes, self.processing, self.restrictions]
for collection in collections:
collection.clear()
self.processing = {addr: set() for addr in self.ncores}
self.stacks = {addr: list() for addr in self.ncores}
self.worker_queues = {addr: Queue() for addr in self.ncores}
with ignoring(AttributeError):
self._delete_coroutine.cancel()
with ignoring(AttributeError):
for c in self._worker_coroutines:
c.cancel()
self._delete_coroutine = self.delete()
self._worker_coroutines = [self.worker(w) for w in self.ncores]
self.heal_state()
if start_queues:
self.handle_queues(self.scheduler_queues[0], None)
for cor in self.coroutines:
if cor.done():
raise cor.exception()
return self._finished()
@gen.coroutine
def _finished(self):
while any(not c.done() for c in self.coroutines):
yield All(self.coroutines)
@gen.coroutine
def _close(self):
yield self.cleanup()
yield self._finished()
yield self.center.close(close=True)
self.center.close_streams()
@gen.coroutine
def cleanup(self):
""" Clean up queues and coroutines, prepare to stop """
if self.status == 'closing':
raise gen.Return()
self.status = 'closing'
logger.debug("Cleaning up coroutines")
n = 0
self.delete_queue.put_nowait({'op': 'close'}); n += 1
for w, nc in self.ncores.items():
for i in range(nc):
self.worker_queues[w].put_nowait({'op': 'close'}); n += 1
for s in self.scheduler_queues[1:]:
s.put_nowait({'op': 'close-stream'})
for i in range(n):
msg = yield self.scheduler_queues[0].get()
for q in self.report_queues:
q.put_nowait({'op': 'close'})
def mark_ready_to_run(self, key):
""" Send task to an appropriate worker, trigger worker """
logger.debug("Mark %s ready to run", key)
if key in self.waiting:
assert not self.waiting[key]
del self.waiting[key]
new_worker = decide_worker(self.dependencies, self.stacks,
self.who_has, self.restrictions, self.nbytes, key)
self.stacks[new_worker].append(key)
self.ensure_occupied(new_worker)
def mark_key_in_memory(self, key, workers=None):
""" Mark that key now lives in particular workers """
logger.debug("Mark %s in memory", key)
if workers is None:
workers = self.who_has[key]
for worker in workers:
self.who_has[key].add(worker)
self.has_what[worker].add(key)
with ignoring(KeyError):
self.processing[worker].remove(key)
for dep in sorted(self.dependents.get(key, []), key=self.keyorder.get,
reverse=True):
if dep in self.waiting:
s = self.waiting[dep]
with ignoring(KeyError):
s.remove(key)
if not s: # new task ready to run
self.mark_ready_to_run(dep)
for dep in self.dependencies.get(key, []):
if dep in self.waiting_data:
s = self.waiting_data[dep]
with ignoring(KeyError):
s.remove(key)
if not s and dep:
self.release_key(dep)
self.report({'op': 'key-in-memory',
'key': key,
'workers': workers})
def ensure_occupied(self, worker):
""" Spin up tasks on worker while it has tasks and free cores """
logger.debug('Ensure worker is occupied: %s', worker)
while (self.stacks[worker] and
self.ncores[worker] > len(self.processing[worker])):
key = self.stacks[worker].pop()
self.processing[worker].add(key)
logger.debug("Send job to worker: %s, %s, %s", worker, key, self.dask[key])
self.worker_queues[worker].put_nowait(
{'op': 'compute-task',
'key': key,
'task': self.dask[key],
'needed': self.dependencies[key]})
def seed_ready_tasks(self, keys=None):
""" Distribute leaves among workers
Takes an iterable of keys to consider for execution
"""
if keys is None:
keys = self.dask
new_stacks = assign_many_tasks(
self.dependencies, self.waiting, self.keyorder, self.who_has,
self.stacks, self.restrictions, self.nbytes,
[k for k in keys if k in self.waiting and not self.waiting[k]])
logger.debug("Seed ready tasks: %s", new_stacks)
for worker, stack in new_stacks.items():
if stack:
self.ensure_occupied(worker)
def release_key(self, key):
""" Release key from distributed memory if its ready """
logger.debug("Release key %s", key)
if key not in self.held_data and not self.waiting_data.get(key):
self.delete_queue.put_nowait({'op': 'delete-task',
'key': key})
for w in self.who_has[key]:
self.has_what[w].remove(key)
del self.who_has[key]
if key in self.waiting_data:
del self.waiting_data[key]
if key in self.in_play:
self.in_play.remove(key)
def update_data(self, who_has=None, nbytes=None):
logger.debug("Update data %s", who_has)
for key, workers in who_has.items():
self.mark_key_in_memory(key, workers)
self.nbytes.update(nbytes)
self.held_data.update(who_has)
self.in_play.update(who_has)
def mark_task_erred(self, key, worker, exception, traceback):
""" Mark that a task has erred on a particular worker """
if key in self.processing[worker]:
self.processing[worker].remove(key)
self.exceptions[key] = exception
self.tracebacks[key] = traceback
self.mark_failed(key, key)
self.ensure_occupied(worker)
for plugin in self.plugins[:]:
try:
plugin.task_erred(self, key, worker, exception)
except Exception as e:
logger.exception(e)
def mark_failed(self, key, failing_key=None):
""" When a task fails mark it and all dependent task as failed """
logger.debug("Mark key as failed %s", key)
if key in self.exceptions_blame:
return
self.exceptions_blame[key] = failing_key
self.report({'op': 'task-erred',
'key': key,
'exception': self.exceptions[failing_key],
'traceback': self.tracebacks[failing_key]})
if key in self.waiting:
del self.waiting[key]
if key in self.waiting_data:
del self.waiting_data[key]
self.in_play.remove(key)
for dep in self.dependents[key]:
self.mark_failed(dep, failing_key)
def mark_task_finished(self, key, worker, nbytes):
""" Mark that a task has finished execution on a particular worker """
logger.debug("Mark task as finished %s, %s", key, worker)
if key in self.processing[worker]:
self.nbytes[key] = nbytes
self.mark_key_in_memory(key, [worker])
self.ensure_occupied(worker)
for plugin in self.plugins[:]:
try:
plugin.task_finished(self, key, worker, nbytes)
except Exception as e:
logger.exception(e)
else:
logger.debug("Key not found in processing, %s, %s, %s",
key, worker, self.processing[worker])
def mark_missing_data(self, missing=None, key=None, worker=None):
missing = set(missing)
logger.debug("Recovering missing data: %s", missing)
for k in missing:
with ignoring(KeyError):
workers = self.who_has.pop(k)
for worker in workers:
self.has_what[worker].remove(k)
self.my_heal_missing_data(missing)
if key and worker:
with ignoring(KeyError):
self.processing[worker].remove(key)
self.waiting[key] = missing
logger.info('task missing data, %s, %s', key, self.waiting)
self.ensure_occupied(worker)
self.seed_ready_tasks()
def log_state(self, msg=''):
logger.debug("Runtime State: %s", msg)
logger.debug('\n\nwaiting: %s\n\nstacks: %s\n\nprocessing: %s\n\n'
'in_play: %s\n\n', self.waiting, self.stacks, self.processing,
self.in_play)
def mark_worker_missing(self, worker=None, heal=True):
""" Mark that a worker no longer seems responsive """
logger.debug("Mark worker as missing %s", worker)
if worker not in self.processing:
return
keys = self.has_what.pop(worker)
for i in range(self.ncores[worker]): # send close message, in case not dead
self.worker_queues[worker].put_nowait({'op': 'close', 'report': False})
del self.worker_queues[worker]
del self.ncores[worker]
del self.stacks[worker]
del self.processing[worker]
if not self.stacks:
logger.critical("Lost all workers")
missing_keys = set()
for key in keys:
self.who_has[key].remove(worker)
if not self.who_has[key]:
missing_keys.add(key)
gone_data = {k for k, v in self.who_has.items() if not v}
self.in_play.difference_update(missing_keys)
for k in gone_data:
del self.who_has[k]
if heal:
self.heal_state()
def update_graph(self, dsk=None, keys=None, restrictions={}):
update_state(self.dask, self.dependencies, self.dependents,
self.held_data, self.who_has, self.in_play,
self.waiting, self.waiting_data, dsk, keys)
cover_aliases(self.dask, dsk)
self.restrictions.update(restrictions)
new_keyorder = order(dsk) # TODO: define order wrt old graph
for key in new_keyorder:
if key not in self.keyorder:
# TODO: add test for this
self.keyorder[key] = (self.generation, new_keyorder[key]) # prefer old
if len(dsk) > 1:
self.generation += 1 # older graph generations take precedence
for key in dsk:
for dep in self.dependencies[key]:
if dep in self.exceptions_blame:
self.mark_failed(key, self.exceptions_blame[dep])
self.seed_ready_tasks(dsk)
for key in keys:
if self.who_has[key]:
self.mark_key_in_memory(key)
for plugin in self.plugins[:]:
try:
plugin.update_graph(self, dsk, keys, restrictions)
except Exception as e:
logger.exception(e)
def release_held_data(self, key=None):
if key in self.held_data:
logger.debug("Release key: %s", key)
self.held_data.remove(key)
self.release_key(key)
def heal_state(self):
""" Recover from catastrophic change """
logger.debug("Heal state")
self.log_state("Before Heal")
state = heal(self.dependencies, self.dependents, set(self.who_has),
self.stacks, self.processing, self.waiting, self.waiting_data)
released = state['released']
self.in_play.clear(); self.in_play.update(state['in_play'])
add_keys = {k for k, v in self.waiting.items() if not v}
for key in self.held_data & released:
self.report({'op': 'lost-key', 'key': key})
if self.stacks:
for key in add_keys:
self.mark_ready_to_run(key)
for key in set(self.who_has) & released - self.held_data:
self.delete_queue.put_nowait({'op': 'delete-task', 'key': key})
self.in_play.update(self.who_has)
self.log_state("After Heal")
def my_heal_missing_data(self, missing):
logger.debug("Heal from missing data")
return heal_missing_data(self.dask, self.dependencies, self.dependents,
self.held_data, self.who_has, self.in_play, self.waiting,
self.waiting_data, missing)
def report(self, msg):
for q in self.report_queues:
q.put_nowait(msg)
def add_plugin(self, plugin):
self.plugins.append(plugin)
def handle_queues(self, scheduler_queue, report_queue):
self.scheduler_queues.append(scheduler_queue)
if report_queue:
self.report_queues.append(report_queue)
future = self.handle_scheduler(scheduler_queue, report_queue)
self.coroutines.append(future)
return future
@gen.coroutine
def handle_scheduler(self, queue, report):
""" The scheduler coroutine for dask scheduling
This coroutine manages interactions with all worker cores and with the
delete coroutine through queues.
Parameters
----------
scheduler_queue: tornado.queues.Queue
Get information from outside
report_queue: tornado.queues.Queue
Report information to outside
worker_queues: dict {worker: tornado.queues.Queue}
One queue per worker node.
Each queue is listened to by several worker_core coroutines.
delete_queue: tornado.queues.Queue
One queue listened to by ``delete`` which connects to the
center to delete unnecessary intermediate data
who_has: dict {key: set}
Mapping key to {set of worker-identities}
has_what: dict {worker: set}
Mapping worker-identity to {set of keys}
ncores: dict {worker: int}
Mapping worker-identity to number-of-cores
"""
assert (not self.dask) == (not self.dependencies), (self.dask, self.dependencies)
if not self.status == 'running':
self.status = 'running'
self.report({'op': 'start'})
if report:
report.put_nowait({'op': 'stream-start'})
while True:
msg = yield queue.get()
logger.debug("scheduler receives message %s", msg)
op = msg.pop('op')
if op == 'close-stream':
break
elif op == 'close':
self._close()
elif op in self.handlers:
result = self.handlers[op](**msg)
if isinstance(result, gen.Future):
yield result
else:
logger.warn("Bad message: op=%s, %s", op, msg)
if op == 'close':
break
logger.debug('Finished scheduling coroutine')
@gen.coroutine
def worker(self, ident):
""" Manage a single distributed worker node
This coroutine manages one remote worker. It spins up several
``worker_core`` coroutines, one for each core. It reports a closed
connection to scheduler if one occurs.
"""
try:
yield All([self.worker_core(ident, i)
for i in range(self.ncores[ident])])
except (IOError, OSError):
logger.info("Worker failed from closed stream: %s", ident)
self.put({'op': 'worker-failed',
'worker': ident})
@gen.coroutine
def worker_core(self, ident, i):
""" Manage one core on one distributed worker node
This coroutine listens on worker_queue for the following operations
**Incoming Messages**:
- compute-task: call worker.compute(...) on remote node, report when done
- close: close connection to worker node, report `worker-finished` to
scheduler
**Outgoing Messages**:
- task-finished: sent to scheduler once a task completes
- task-erred: sent to scheduler when a task errs
- worker-finished: sent to scheduler in response to a close command
"""
worker = rpc(ip=ident[0], port=ident[1])
logger.debug("Start worker core %s, %d", ident, i)
while True:
msg = yield self.worker_queues[ident].get()
if msg['op'] == 'close':
logger.debug("Worker core receives close message %s, %s",
ident, msg)
break
if msg['op'] == 'compute-task':
key = msg['key']
needed = msg['needed']
task = msg['task']
if not istask(task):
response, content = yield worker.update_data(data={key: task})
assert response == b'OK', response
nbytes = content['nbytes'][key]
else:
response, content = yield worker.compute(function=execute_task,
args=(task,),
needed=needed,
key=key,
kwargs={})
if response == b'OK':
nbytes = content['nbytes']
logger.debug("Compute response from worker %s, %s, %s, %s",
ident, key, response, content)
if response == b'error':
error, traceback = content
self.mark_task_erred(key, ident, error, traceback)
elif response == b'missing-data':
self.mark_missing_data(content.args, key=key, worker=ident)
else:
self.mark_task_finished(key, ident, nbytes)
yield worker.close(close=True)
worker.close_streams()
if msg.get('report', True):
self.put({'op': 'worker-finished',
'worker': ident})
logger.debug("Close worker core, %s, %d", ident, i)
@gen.coroutine
def delete(self):
""" Delete extraneous intermediates from distributed memory
This coroutine manages a connection to the center in order to send keys
that should be removed from distributed memory. We batch several keys that
come in over the ``delete_queue`` into a list. Roughly once a second we
send this list of keys over to the center which then handles deleting
these keys from workers' memory.
worker \ /-> worker node
worker -> scheduler -> delete -> center --> worker node
worker / \-> worker node
**Incoming Messages**
- delete-task: holds a key to be deleted
- close: close this coroutine
"""
batch = list()
last = time()
while True:
msg = yield self.delete_queue.get()
if msg['op'] == 'close':
break
# TODO: trigger coroutine to go off in a second if no activity
batch.append(msg['key'])
if batch and time() - last > self.delete_batch_time: # One second batching
logger.debug("Ask center to delete %d keys", len(batch))
last = time()
yield self.center.delete_data(keys=batch)
batch = list()
if batch:
yield self.center.delete_data(keys=batch)
self.put({'op': 'delete-finished'})
logger.debug('Delete finished')
@gen.coroutine
def _nanny_listen(self, ip, port):
stream = yield connect(ip=ip, port=port)
yield write(stream, {'op': 'monitor_resources',
'interval': self.resource_interval})
while not stream.closed():
msg = yield read(stream)
self.resource_logs[(ip, port)].append(msg)
@gen.coroutine
def _scatter(self, stream, data=None, workers=None):
if not self.ncores:
raise ValueError("No workers yet found. "
"Try syncing with center.\n"
" e.sync_center()")
ncores = workers if workers is not None else self.ncores
remotes, who_has, nbytes = yield scatter_to_workers(
self.center, ncores, data)
self.update_data(who_has=who_has, nbytes=nbytes)
raise gen.Return(remotes)
@gen.coroutine
def _restart(self):
logger.debug("Send shutdown signal to workers")
for q in self.scheduler_queues + self.report_queues:
clear_queue(q)
for addr in self.nannies:
self.mark_worker_missing(worker=addr, heal=False)
logger.debug("Send kill signal to nannies")
nannies = [rpc(ip=ip, port=n_port)
for (ip, w_port), n_port in self.nannies.items()]
yield All([nanny.kill() for nanny in nannies])
while self.ncores:
yield gen.sleep(0.01)
# All quiet
yield All([nanny.instantiate(close=True) for nanny in nannies])
yield self._sync_center()
self.start()
self.report({'op': 'restart'})
for plugin in self.plugins[:]:
try:
plugin.restart(self)
except Exception as e:
logger.exception(e)
class SQSSource(object):
"""Implementation of ISource that receives messages from a SQS queue.
"""
max_delete_delay = 5
def __init__(self, logger, loop, gate, sqs_client, metric_prefix='source'):
self.gate = gate
self.collector = sqs_client
self.logger = logger
self.loop = loop
self.metric_prefix = metric_prefix
self.end_of_input = Event()
self.input_error = Event()
self.state = RUNNING
self._delete_queue = Queue()
self._should_flush_queue = Event()
self.sender_tag = 'sender:%s.%s' % (self.__class__.__module__,
self.__class__.__name__)
self.loop.spawn_callback(self.onInput)
self.loop.spawn_callback(self._onDelete)
@gen.coroutine
def close(self, timeout=None):
self.state = CLOSING
self.logger.warning('Closing source')
yield self._delete_queue.join(timeout)
@gen.coroutine
def _flush_delete_batch(self, batch_size):
delete_batch = [
self._delete_queue.get_nowait()
for pos in range(min(batch_size, self.collector.max_messages))
]
try:
response = yield self.collector.delete_message_batch(*delete_batch)
except SQSError as err:
lmsg = 'Error encountered deleting processed messages in SQS: %s'
self.logger.exception(lmsg, err)
self.input_error.set()
for msg in delete_batch:
self._delete_queue.put_nowait(msg)
else:
if response.Failed:
self.input_error.set()
for req in response.Failed:
self.logger.error('Message failed to delete: %s', req.Id)
self._delete_queue.put_nowait(req)
@gen.coroutine
def _onDelete(self):
respawn = True
while respawn:
try:
qsize = self._delete_queue.qsize()
# This will keep flushing until clear,
# including items that show up in between flushes
while qsize > 0:
yield self._flush_delete_batch(qsize)
qsize = self._delete_queue.qsize()
self._should_flush_queue.clear()
yield self._should_flush_queue.wait()
except Exception as err:
self.logger.exception(err)
self.input_error.set()
respawn = False
@gen.coroutine
def onInput(self):
respawn = True
retry_timeout = INITIAL_TIMEOUT
# We use an algorithm similar to TCP window scaling,
# so that we request fewer messages when we encounter
# back pressure from our gate/drain and request more
# when we flushed a complete batch
window_size = self.collector.max_messages
while respawn:
try:
response = yield self.collector.receive_message_batch(
max_messages=window_size, )
if response.Messages:
# We need to have low latency to delete messages
# we've processed
retry_timeout = INITIAL_TIMEOUT
else:
retry_timeout = min(retry_timeout * 2, MAX_TIMEOUT)
yield gen.sleep(retry_timeout.total_seconds())
sent_full_batch = True
for position, msg in enumerate(response.Messages):
try:
self.gate.put_nowait(msg)
except QueueFull:
self.logger.debug('Gate queue full; yielding')
sent_full_batch = False
# TODO: is it worth trying to batch and schedule
# a flush at this point instead of many
# single deletes?
yield self.gate.put(msg)
self._should_flush_queue.set()
self._delete_queue.put_nowait(msg)
statsd.increment('%s.queued' % self.metric_prefix,
tags=[self.sender_tag])
# If we were able to flush the entire batch without waiting,
# increase our window size to max_messages
if sent_full_batch and \
window_size < self.collector.max_messages:
window_size += 1
# Otherwise ask for less next time
elif not sent_full_batch and window_size > 1:
window_size -= 1
except Exception as err:
self.logger.exception(err)
self.input_error.set()
respawn = False
class Debugger:
# Requests that requires that the debugger has started
started_debug_msg_types = [
"dumpCell",
"setBreakpoints",
"source",
"stackTrace",
"variables",
"attach",
"configurationDone",
]
# Requests that can be handled even if the debugger is not running
static_debug_msg_types = [
"debugInfo", "inspectVariables", "richInspectVariables", "modules"
]
def __init__(self,
log,
debugpy_stream,
event_callback,
shell_socket,
session,
just_my_code=True):
self.log = log
self.debugpy_client = DebugpyClient(log, debugpy_stream,
self._handle_event)
self.shell_socket = shell_socket
self.session = session
self.is_started = False
self.event_callback = event_callback
self.just_my_code = just_my_code
self.stopped_queue = Queue()
self.started_debug_handlers = {}
for msg_type in Debugger.started_debug_msg_types:
self.started_debug_handlers[msg_type] = getattr(self, msg_type)
self.static_debug_handlers = {}
for msg_type in Debugger.static_debug_msg_types:
self.static_debug_handlers[msg_type] = getattr(self, msg_type)
self.breakpoint_list = {}
self.stopped_threads = set()
self.debugpy_initialized = False
self._removed_cleanup = {}
self.debugpy_host = "127.0.0.1"
self.debugpy_port = 0
self.endpoint = None
self.variable_explorer = VariableExplorer()
def _handle_event(self, msg):
if msg["event"] == "stopped":
if msg["body"]["allThreadsStopped"]:
self.stopped_queue.put_nowait(msg)
# Do not forward the event now, will be done in the handle_stopped_event
return
else:
self.stopped_threads.add(msg["body"]["threadId"])
self.event_callback(msg)
elif msg["event"] == "continued":
if msg["body"]["allThreadsContinued"]:
self.stopped_threads = set()
else:
self.stopped_threads.remove(msg["body"]["threadId"])
self.event_callback(msg)
else:
self.event_callback(msg)
async def _forward_message(self, msg):
return await self.debugpy_client.send_dap_request(msg)
def _build_variables_response(self, request, variables):
var_list = [
var for var in variables if self.accept_variable(var["name"])
]
reply = {
"seq": request["seq"],
"type": "response",
"request_seq": request["seq"],
"success": True,
"command": request["command"],
"body": {
"variables": var_list
},
}
return reply
def _accept_stopped_thread(self, thread_name):
# TODO: identify Thread-2, Thread-3 and Thread-4. These are NOT
# Control, IOPub or Heartbeat threads
forbid_list = [
"IPythonHistorySavingThread", "Thread-2", "Thread-3", "Thread-4"
]
return thread_name not in forbid_list
async def handle_stopped_event(self):
# Wait for a stopped event message in the stopped queue
# This message is used for triggering the 'threads' request
event = await self.stopped_queue.get()
req = {
"seq": event["seq"] + 1,
"type": "request",
"command": "threads"
}
rep = await self._forward_message(req)
for t in rep["body"]["threads"]:
if self._accept_stopped_thread(t["name"]):
self.stopped_threads.add(t["id"])
self.event_callback(event)
@property
def tcp_client(self):
return self.debugpy_client
def start(self):
if not self.debugpy_initialized:
tmp_dir = get_tmp_directory()
if not os.path.exists(tmp_dir):
os.makedirs(tmp_dir)
host, port = self.debugpy_client.get_host_port()
code = "import debugpy;"
code += 'debugpy.listen(("' + host + '",' + port + "))"
content = {"code": code, "silent": True}
self.session.send(
self.shell_socket,
"execute_request",
content,
None,
(self.shell_socket.getsockopt(ROUTING_ID)),
)
ident, msg = self.session.recv(self.shell_socket, mode=0)
self.debugpy_initialized = msg["content"]["status"] == "ok"
# Don't remove leading empty lines when debugging so the breakpoints are correctly positioned
cleanup_transforms = get_ipython(
).input_transformer_manager.cleanup_transforms
if leading_empty_lines in cleanup_transforms:
index = cleanup_transforms.index(leading_empty_lines)
self._removed_cleanup[index] = cleanup_transforms.pop(index)
self.debugpy_client.connect_tcp_socket()
return self.debugpy_initialized
def stop(self):
self.debugpy_client.disconnect_tcp_socket()
# Restore remove cleanup transformers
cleanup_transforms = get_ipython(
).input_transformer_manager.cleanup_transforms
for index in sorted(self._removed_cleanup):
func = self._removed_cleanup.pop(index)
cleanup_transforms.insert(index, func)
async def dumpCell(self, message):
code = message["arguments"]["code"]
file_name = get_file_name(code)
with open(file_name, "w", encoding="utf-8") as f:
f.write(code)
reply = {
"type": "response",
"request_seq": message["seq"],
"success": True,
"command": message["command"],
"body": {
"sourcePath": file_name
},
}
return reply
async def setBreakpoints(self, message):
source = message["arguments"]["source"]["path"]
self.breakpoint_list[source] = message["arguments"]["breakpoints"]
return await self._forward_message(message)
async def source(self, message):
reply = {
"type": "response",
"request_seq": message["seq"],
"command": message["command"]
}
source_path = message["arguments"]["source"]["path"]
if os.path.isfile(source_path):
with open(source_path, encoding="utf-8") as f:
reply["success"] = True
reply["body"] = {"content": f.read()}
else:
reply["success"] = False
reply["message"] = "source unavailable"
reply["body"] = {}
return reply
async def stackTrace(self, message):
reply = await self._forward_message(message)
# The stackFrames array can have the following content:
# { frames from the notebook}
# ...
# { 'id': xxx, 'name': '<module>', ... } <= this is the first frame of the code from the notebook
# { frames from ipykernel }
# ...
# {'id': yyy, 'name': '<module>', ... } <= this is the first frame of ipykernel code
# or only the frames from the notebook.
# We want to remove all the frames from ipykernel when they are present.
try:
sf_list = reply["body"]["stackFrames"]
module_idx = len(sf_list) - next(
i for i, v in enumerate(reversed(sf_list), 1)
if v["name"] == "<module>" and i != 1)
reply["body"]["stackFrames"] = reply["body"][
"stackFrames"][:module_idx + 1]
except StopIteration:
pass
return reply
def accept_variable(self, variable_name):
forbid_list = [
"__name__",
"__doc__",
"__package__",
"__loader__",
"__spec__",
"__annotations__",
"__builtins__",
"__builtin__",
"__display__",
"get_ipython",
"debugpy",
"exit",
"quit",
"In",
"Out",
"_oh",
"_dh",
"_",
"__",
"___",
]
cond = variable_name not in forbid_list
cond = cond and not bool(re.search(r"^_\d", variable_name))
cond = cond and variable_name[0:2] != "_i"
return cond
async def variables(self, message):
reply = {}
if not self.stopped_threads:
variables = self.variable_explorer.get_children_variables(
message["arguments"]["variablesReference"])
return self._build_variables_response(message, variables)
else:
reply = await self._forward_message(message)
# TODO : check start and count arguments work as expected in debugpy
reply["body"]["variables"] = [
var for var in reply["body"]["variables"]
if self.accept_variable(var["name"])
]
return reply
async def attach(self, message):
host, port = self.debugpy_client.get_host_port()
message["arguments"]["connect"] = {"host": host, "port": port}
message["arguments"]["logToFile"] = True
# Experimental option to break in non-user code.
# The ipykernel source is in the call stack, so the user
# has to manipulate the step-over and step-into in a wize way.
# Set debugOptions for breakpoints in python standard library source.
if not self.just_my_code:
message["arguments"]["debugOptions"] = ["DebugStdLib"]
return await self._forward_message(message)
async def configurationDone(self, message):
reply = {
"seq": message["seq"],
"type": "response",
"request_seq": message["seq"],
"success": True,
"command": message["command"],
}
return reply
async def debugInfo(self, message):
breakpoint_list = []
for key, value in self.breakpoint_list.items():
breakpoint_list.append({"source": key, "breakpoints": value})
reply = {
"type": "response",
"request_seq": message["seq"],
"success": True,
"command": message["command"],
"body": {
"isStarted": self.is_started,
"hashMethod": "Murmur2",
"hashSeed": get_tmp_hash_seed(),
"tmpFilePrefix": get_tmp_directory() + os.sep,
"tmpFileSuffix": ".py",
"breakpoints": breakpoint_list,
"stoppedThreads": list(self.stopped_threads),
"richRendering": True,
"exceptionPaths": ["Python Exceptions"],
},
}
return reply
async def inspectVariables(self, message):
self.variable_explorer.untrack_all()
# looks like the implementation of untrack_all in ptvsd
# destroys objects we nee din track. We have no choice but
# reinstantiate the object
self.variable_explorer = VariableExplorer()
self.variable_explorer.track()
variables = self.variable_explorer.get_children_variables()
return self._build_variables_response(message, variables)
async def richInspectVariables(self, message):
reply = {
"type": "response",
"sequence_seq": message["seq"],
"success": False,
"command": message["command"],
}
var_name = message["arguments"]["variableName"]
valid_name = str.isidentifier(var_name)
if not valid_name:
reply["body"] = {"data": {}, "metadata": {}}
if var_name == "special variables" or var_name == "function variables":
reply["success"] = True
return reply
repr_data = {}
repr_metadata = {}
if not self.stopped_threads:
# The code did not hit a breakpoint, we use the intepreter
# to get the rich representation of the variable
result = get_ipython().user_expressions({var_name:
var_name})[var_name]
if result.get("status", "error") == "ok":
repr_data = result.get("data", {})
repr_metadata = result.get("metadata", {})
else:
# The code has stopped on a breakpoint, we use the setExpression
# request to get the rich representation of the variable
code = f"get_ipython().display_formatter.format({var_name})"
frame_id = message["arguments"]["frameId"]
seq = message["seq"]
reply = await self._forward_message({
"type": "request",
"command": "evaluate",
"seq": seq + 1,
"arguments": {
"expression": code,
"frameId": frame_id
},
})
if reply["success"]:
repr_data, repr_metadata = eval(reply["body"]["result"], {},
{})
body = {
"data": repr_data,
"metadata":
{k: v
for k, v in repr_metadata.items() if k in repr_data},
}
reply["body"] = body
reply["success"] = True
return reply
async def modules(self, message):
modules = list(sys.modules.values())
startModule = message.get("startModule", 0)
moduleCount = message.get("moduleCount", len(modules))
mods = []
for i in range(startModule, moduleCount):
module = modules[i]
filename = getattr(getattr(module, "__spec__", None), "origin",
None)
if filename and filename.endswith(".py"):
mods.append({
"id": i,
"name": module.__name__,
"path": filename
})
reply = {"body": {"modules": mods, "totalModules": len(modules)}}
return reply
async def process_request(self, message):
reply = {}
if message["command"] == "initialize":
if self.is_started:
self.log.info("The debugger has already started")
else:
self.is_started = self.start()
if self.is_started:
self.log.info("The debugger has started")
else:
reply = {
"command": "initialize",
"request_seq": message["seq"],
"seq": 3,
"success": False,
"type": "response",
}
handler = self.static_debug_handlers.get(message["command"], None)
if handler is not None:
reply = await handler(message)
elif self.is_started:
handler = self.started_debug_handlers.get(message["command"], None)
if handler is not None:
reply = await handler(message)
else:
reply = await self._forward_message(message)
if message["command"] == "disconnect":
self.stop()
self.breakpoint_list = {}
self.stopped_threads = set()
self.is_started = False
self.log.info("The debugger has stopped")
return reply
class Debugger:
# Requests that requires that the debugger has started
started_debug_msg_types = [
'dumpCell', 'setBreakpoints', 'source', 'stackTrace', 'variables',
'attach', 'configurationDone'
]
# Requests that can be handled even if the debugger is not running
static_debug_msg_types = [
'debugInfo', 'inspectVariables', 'richInspectVariables', 'modules'
]
def __init__(self, log, debugpy_stream, event_callback, shell_socket,
session):
self.log = log
self.debugpy_client = DebugpyClient(log, debugpy_stream,
self._handle_event)
self.shell_socket = shell_socket
self.session = session
self.is_started = False
self.event_callback = event_callback
self.stopped_queue = Queue()
self.started_debug_handlers = {}
for msg_type in Debugger.started_debug_msg_types:
self.started_debug_handlers[msg_type] = getattr(self, msg_type)
self.static_debug_handlers = {}
for msg_type in Debugger.static_debug_msg_types:
self.static_debug_handlers[msg_type] = getattr(self, msg_type)
self.breakpoint_list = {}
self.stopped_threads = set()
self.debugpy_initialized = False
self._removed_cleanup = {}
self.debugpy_host = '127.0.0.1'
self.debugpy_port = 0
self.endpoint = None
self.variable_explorer = VariableExplorer()
def _handle_event(self, msg):
if msg['event'] == 'stopped':
if msg['body']['allThreadsStopped']:
self.stopped_queue.put_nowait(msg)
# Do not forward the event now, will be done in the handle_stopped_event
return
else:
self.stopped_threads.add(msg['body']['threadId'])
self.event_callback(msg)
elif msg['event'] == 'continued':
if msg['body']['allThreadsContinued']:
self.stopped_threads = set()
else:
self.stopped_threads.remove(msg['body']['threadId'])
self.event_callback(msg)
else:
self.event_callback(msg)
async def _forward_message(self, msg):
return await self.debugpy_client.send_dap_request(msg)
def _build_variables_response(self, request, variables):
var_list = [
var for var in variables if self.accept_variable(var['name'])
]
reply = {
'seq': request['seq'],
'type': 'response',
'request_seq': request['seq'],
'success': True,
'command': request['command'],
'body': {
'variables': var_list
}
}
return reply
def _accept_stopped_thread(self, thread_name):
# TODO: identify Thread-2, Thread-3 and Thread-4. These are NOT
# Control, IOPub or Heartbeat threads
forbid_list = [
'IPythonHistorySavingThread', 'Thread-2', 'Thread-3', 'Thread-4'
]
return thread_name not in forbid_list
async def handle_stopped_event(self):
# Wait for a stopped event message in the stopped queue
# This message is used for triggering the 'threads' request
event = await self.stopped_queue.get()
req = {
'seq': event['seq'] + 1,
'type': 'request',
'command': 'threads'
}
rep = await self._forward_message(req)
for t in rep['body']['threads']:
if self._accept_stopped_thread(t['name']):
self.stopped_threads.add(t['id'])
self.event_callback(event)
@property
def tcp_client(self):
return self.debugpy_client
def start(self):
if not self.debugpy_initialized:
tmp_dir = get_tmp_directory()
if not os.path.exists(tmp_dir):
os.makedirs(tmp_dir)
host, port = self.debugpy_client.get_host_port()
code = 'import debugpy;'
code += 'debugpy.listen(("' + host + '",' + port + '))'
content = {'code': code, 'silent': True}
self.session.send(self.shell_socket, 'execute_request', content,
None, (self.shell_socket.getsockopt(ROUTING_ID)))
ident, msg = self.session.recv(self.shell_socket, mode=0)
self.debugpy_initialized = msg['content']['status'] == 'ok'
# Don't remove leading empty lines when debugging so the breakpoints are correctly positioned
cleanup_transforms = get_ipython(
).input_transformer_manager.cleanup_transforms
if leading_empty_lines in cleanup_transforms:
index = cleanup_transforms.index(leading_empty_lines)
self._removed_cleanup[index] = cleanup_transforms.pop(index)
self.debugpy_client.connect_tcp_socket()
return self.debugpy_initialized
def stop(self):
self.debugpy_client.disconnect_tcp_socket()
# Restore remove cleanup transformers
cleanup_transforms = get_ipython(
).input_transformer_manager.cleanup_transforms
for index in sorted(self._removed_cleanup):
func = self._removed_cleanup.pop(index)
cleanup_transforms.insert(index, func)
async def dumpCell(self, message):
code = message['arguments']['code']
file_name = get_file_name(code)
with open(file_name, 'w', encoding='utf-8') as f:
f.write(code)
reply = {
'type': 'response',
'request_seq': message['seq'],
'success': True,
'command': message['command'],
'body': {
'sourcePath': file_name
}
}
return reply
async def setBreakpoints(self, message):
source = message["arguments"]["source"]["path"]
self.breakpoint_list[source] = message["arguments"]["breakpoints"]
return await self._forward_message(message)
async def source(self, message):
reply = {
'type': 'response',
'request_seq': message['seq'],
'command': message['command']
}
source_path = message["arguments"]["source"]["path"]
if os.path.isfile(source_path):
with open(source_path, encoding='utf-8') as f:
reply['success'] = True
reply['body'] = {'content': f.read()}
else:
reply['success'] = False
reply['message'] = 'source unavailable'
reply['body'] = {}
return reply
async def stackTrace(self, message):
reply = await self._forward_message(message)
# The stackFrames array can have the following content:
# { frames from the notebook}
# ...
# { 'id': xxx, 'name': '<module>', ... } <= this is the first frame of the code from the notebook
# { frames from ipykernel }
# ...
# {'id': yyy, 'name': '<module>', ... } <= this is the first frame of ipykernel code
# or only the frames from the notebook.
# We want to remove all the frames from ipykernel when they are present.
try:
sf_list = reply["body"]["stackFrames"]
module_idx = len(sf_list) - next(
i for i, v in enumerate(reversed(sf_list), 1)
if v["name"] == "<module>" and i != 1)
reply["body"]["stackFrames"] = reply["body"][
"stackFrames"][:module_idx + 1]
except StopIteration:
pass
return reply
def accept_variable(self, variable_name):
forbid_list = [
'__name__', '__doc__', '__package__', '__loader__', '__spec__',
'__annotations__', '__builtins__', '__builtin__', '__display__',
'get_ipython', 'debugpy', 'exit', 'quit', 'In', 'Out', '_oh',
'_dh', '_', '__', '___'
]
cond = variable_name not in forbid_list
cond = cond and not bool(re.search(r'^_\d', variable_name))
cond = cond and variable_name[0:2] != '_i'
return cond
async def variables(self, message):
reply = {}
if not self.stopped_threads:
variables = self.variable_explorer.get_children_variables(
message['arguments']['variablesReference'])
return self._build_variables_response(message, variables)
else:
reply = await self._forward_message(message)
# TODO : check start and count arguments work as expected in debugpy
reply['body']['variables'] = \
[var for var in reply['body']['variables'] if self.accept_variable(var['name'])]
return reply
async def attach(self, message):
host, port = self.debugpy_client.get_host_port()
message['arguments']['connect'] = {'host': host, 'port': port}
message['arguments']['logToFile'] = True
# Reverts that option for now since it leads to spurious break of the code
# in ipykernel source and resuming the execution leads to several errors
# in the kernel.
# Set debugOptions for breakpoints in python standard library source.
# message['arguments']['debugOptions'] = [ 'DebugStdLib' ]
return await self._forward_message(message)
async def configurationDone(self, message):
reply = {
'seq': message['seq'],
'type': 'response',
'request_seq': message['seq'],
'success': True,
'command': message['command']
}
return reply
async def debugInfo(self, message):
breakpoint_list = []
for key, value in self.breakpoint_list.items():
breakpoint_list.append({'source': key, 'breakpoints': value})
reply = {
'type': 'response',
'request_seq': message['seq'],
'success': True,
'command': message['command'],
'body': {
'isStarted': self.is_started,
'hashMethod': 'Murmur2',
'hashSeed': get_tmp_hash_seed(),
'tmpFilePrefix': get_tmp_directory() + os.sep,
'tmpFileSuffix': '.py',
'breakpoints': breakpoint_list,
'stoppedThreads': list(self.stopped_threads),
'richRendering': True,
'exceptionPaths': ['Python Exceptions']
}
}
return reply
async def inspectVariables(self, message):
self.variable_explorer.untrack_all()
# looks like the implementation of untrack_all in ptvsd
# destroys objects we nee din track. We have no choice but
# reinstantiate the object
self.variable_explorer = VariableExplorer()
self.variable_explorer.track()
variables = self.variable_explorer.get_children_variables()
return self._build_variables_response(message, variables)
async def richInspectVariables(self, message):
reply = {
"type": "response",
"sequence_seq": message["seq"],
"success": False,
"command": message["command"],
}
var_name = message["arguments"]["variableName"]
valid_name = str.isidentifier(var_name)
if not valid_name:
reply["body"] = {"data": {}, "metadata": {}}
if var_name == "special variables" or var_name == "function variables":
reply["success"] = True
return reply
repr_data = {}
repr_metadata = {}
if not self.stopped_threads:
# The code did not hit a breakpoint, we use the intepreter
# to get the rich representation of the variable
result = get_ipython().user_expressions({var_name:
var_name})[var_name]
if result.get("status", "error") == "ok":
repr_data = result.get("data", {})
repr_metadata = result.get("metadata", {})
else:
# The code has stopped on a breakpoint, we use the setExpression
# request to get the rich representation of the variable
code = f"get_ipython().display_formatter.format({var_name})"
frame_id = message["arguments"]["frameId"]
seq = message["seq"]
reply = await self._forward_message({
"type": "request",
"command": "evaluate",
"seq": seq + 1,
"arguments": {
"expression": code,
"frameId": frame_id
},
})
if reply["success"]:
repr_data, repr_metadata = eval(reply["body"]["result"], {},
{})
body = {
"data": repr_data,
"metadata":
{k: v
for k, v in repr_metadata.items() if k in repr_data},
}
reply["body"] = body
reply["success"] = True
return reply
async def modules(self, message):
modules = list(sys.modules.values())
startModule = message.get('startModule', 0)
moduleCount = message.get('moduleCount', len(modules))
mods = []
for i in range(startModule, moduleCount):
module = modules[i]
filename = getattr(getattr(module, '__spec__', None), 'origin',
None)
if filename and filename.endswith('.py'):
mods.append({
'id': i,
'name': module.__name__,
'path': filename
})
reply = {'body': {'modules': mods, 'totalModules': len(modules)}}
return reply
async def process_request(self, message):
reply = {}
if message['command'] == 'initialize':
if self.is_started:
self.log.info('The debugger has already started')
else:
self.is_started = self.start()
if self.is_started:
self.log.info('The debugger has started')
else:
reply = {
'command': 'initialize',
'request_seq': message['seq'],
'seq': 3,
'success': False,
'type': 'response'
}
handler = self.static_debug_handlers.get(message['command'], None)
if handler is not None:
reply = await handler(message)
elif self.is_started:
handler = self.started_debug_handlers.get(message['command'], None)
if handler is not None:
reply = await handler(message)
else:
reply = await self._forward_message(message)
if message['command'] == 'disconnect':
self.stop()
self.breakpoint_list = {}
self.stopped_threads = set()
self.is_started = False
self.log.info('The debugger has stopped')
return reply
class TornadoTransmission():
def __init__(self,
max_concurrent_batches=10,
block_on_send=False,
block_on_response=False,
max_batch_size=100,
send_frequency=timedelta(seconds=0.25),
user_agent_addition=''):
if not has_tornado:
raise ImportError(
'TornadoTransmission requires tornado, but it was not found.'
)
self.block_on_send = block_on_send
self.block_on_response = block_on_response
self.max_batch_size = max_batch_size
self.send_frequency = send_frequency
user_agent = "libhoney-py/" + VERSION
if user_agent_addition:
user_agent += " " + user_agent_addition
self.http_client = AsyncHTTPClient(
force_instance=True, defaults=dict(user_agent=user_agent))
# libhoney adds events to the pending queue for us to send
self.pending = Queue(maxsize=1000)
# we hand back responses from the API on the responses queue
self.responses = Queue(maxsize=2000)
self.batch_data = {}
self.sd = statsd.StatsClient(prefix="libhoney")
self.batch_sem = Semaphore(max_concurrent_batches)
def start(self):
ioloop.IOLoop.current().spawn_callback(self._sender)
def send(self, ev):
'''send accepts an event and queues it to be sent'''
self.sd.gauge("queue_length", self.pending.qsize())
try:
if self.block_on_send:
self.pending.put(ev)
else:
self.pending.put_nowait(ev)
self.sd.incr("messages_queued")
except QueueFull:
response = {
"status_code": 0,
"duration": 0,
"metadata": ev.metadata,
"body": "",
"error": "event dropped; queue overflow",
}
if self.block_on_response:
self.responses.put(response)
else:
try:
self.responses.put_nowait(response)
except QueueFull:
# if the response queue is full when trying to add an event
# queue is full response, just skip it.
pass
self.sd.incr("queue_overflow")
# We're using the older decorator/yield model for compatibility with
# Python versions before 3.5.
# See: http://www.tornadoweb.org/en/stable/guide/coroutines.html#python-3-5-async-and-await
@gen.coroutine
def _sender(self):
'''_sender is the control loop that pulls events off the `self.pending`
queue and submits batches for actual sending. '''
events = []
last_flush = time.time()
while True:
try:
ev = yield self.pending.get(timeout=self.send_frequency)
if ev is None:
# signals shutdown
yield self._flush(events)
return
events.append(ev)
if (len(events) > self.max_batch_size
or time.time() - last_flush >
self.send_frequency.total_seconds()):
yield self._flush(events)
events = []
except TimeoutError:
yield self._flush(events)
events = []
last_flush = time.time()
@gen.coroutine
def _flush(self, events):
if not events:
return
for dest, group in group_events_by_destination(events).items():
yield self._send_batch(dest, group)
@gen.coroutine
def _send_batch(self, destination, events):
''' Makes a single batch API request with the given list of events. The
`destination` argument contains the write key, API host and dataset
name used to build the request.'''
start = time.time()
status_code = 0
try:
# enforce max_concurrent_batches
yield self.batch_sem.acquire()
url = urljoin(urljoin(destination.api_host, "/1/batch/"),
destination.dataset)
payload = []
for ev in events:
event_time = ev.created_at.isoformat()
if ev.created_at.tzinfo is None:
event_time += "Z"
payload.append({
"time": event_time,
"samplerate": ev.sample_rate,
"data": ev.fields()
})
req = HTTPRequest(
url,
method='POST',
headers={
"X-Honeycomb-Team": destination.writekey,
"Content-Type": "application/json",
},
body=json.dumps(payload, default=json_default_handler),
)
self.http_client.fetch(req, self._response_callback)
# store the events that were sent so we can process responses later
# it is important that we delete these eventually, or we'll run into memory issues
self.batch_data[req] = {"start": start, "events": events}
except Exception as e:
# Catch all exceptions and hand them to the responses queue.
self._enqueue_errors(status_code, e, start, events)
finally:
self.batch_sem.release()
def _enqueue_errors(self, status_code, error, start, events):
for ev in events:
self.sd.incr("send_errors")
self._enqueue_response(status_code, "", error, start,
ev.metadata)
def _response_callback(self, resp):
# resp.request should be the same HTTPRequest object built by _send_batch
# and mapped to values in batch_data
events = self.batch_data[resp.request]["events"]
start = self.batch_data[resp.request]["start"]
try:
status_code = resp.code
resp.rethrow()
statuses = [d["status"] for d in json.loads(resp.body)]
for ev, status in zip(events, statuses):
self._enqueue_response(status, "", None, start,
ev.metadata)
self.sd.incr("messages_sent")
except Exception as e:
self._enqueue_errors(status_code, e, start, events)
self.sd.incr("send_errors")
finally:
# clean up the data for this batch
del self.batch_data[resp.request]
def _enqueue_response(self, status_code, body, error, start, metadata):
resp = {
"status_code": status_code,
"body": body,
"error": error,
"duration": (time.time() - start) * 1000,
"metadata": metadata
}
if self.block_on_response:
self.responses.put(resp)
else:
try:
self.responses.put_nowait(resp)
except QueueFull:
pass
def close(self):
'''call close to send all in-flight requests and shut down the
senders nicely. Times out after max 20 seconds per sending thread
plus 10 seconds for the response queue'''
try:
self.pending.put(None, 10)
except QueueFull:
pass
# signal to the responses queue that nothing more is coming.
try:
self.responses.put(None, 10)
except QueueFull:
pass
def get_response_queue(self):
''' return the responses queue on to which will be sent the response
objects from each event send'''
return self.responses
class Rx(PrettyPrintable):
def __init__(self, rx_tree, session_id, header_table=None, io_loop=None, service_name=None,
raw_headers=None, trace_id=None):
if header_table is None:
header_table = CocaineHeaders()
# If it's not the main thread
# and a current IOloop doesn't exist here,
# IOLoop.instance becomes self._io_loop
self._io_loop = io_loop or IOLoop.current()
self._queue = Queue()
self._done = False
self.session_id = session_id
self.service_name = service_name
self.rx_tree = rx_tree
self.default_protocol = detect_protocol_type(rx_tree)
self._headers = header_table
self._current_headers = self._headers.merge(raw_headers)
self.log = get_trace_adapter(log, trace_id)
@coroutine
def get(self, timeout=0, protocol=None):
if self._done and self._queue.empty():
raise ChokeEvent()
# to pull various service errors
if timeout <= 0:
item = yield self._queue.get()
else:
deadline = datetime.timedelta(seconds=timeout)
item = yield self._queue.get(deadline)
if isinstance(item, Exception):
raise item
if protocol is None:
protocol = self.default_protocol
name, payload, raw_headers = item
self._current_headers = self._headers.merge(raw_headers)
res = protocol(name, payload)
if isinstance(res, ProtocolError):
raise ServiceError(self.service_name, res.reason, res.code, res.category)
else:
raise Return(res)
def done(self):
self._done = True
def push(self, msg_type, payload, raw_headers):
dispatch = self.rx_tree.get(msg_type)
self.log.debug("dispatch %s %.300s", dispatch, payload)
if dispatch is None:
raise InvalidMessageType(self.service_name, CocaineErrno.INVALIDMESSAGETYPE,
"unexpected message type %s" % msg_type)
name, rx = dispatch
self.log.info(
"got message from `%s`: channel id: %s, type: %s",
self.service_name,
self.session_id,
name
)
self._queue.put_nowait((name, payload, raw_headers))
if rx == {}: # the last transition
self.done()
elif rx is not None: # not a recursive transition
self.rx_tree = rx
def error(self, err):
self._queue.put_nowait(err)
def closed(self):
return self._done
def _format(self):
return "name: %s, queue: %s, done: %s" % (self.service_name, self._queue, self._done)
@property
def headers(self):
return self._current_headers
class Worker(Server):
""" Worker Node
Workers perform two functions:
1. **Serve data** from a local dictionary
2. **Perform computation** on that data and on data from peers
Additionally workers keep a Center informed of their data and use that
Center to gather data from other workers when necessary to perform a
computation.
You can start a worker with the ``dworker`` command line application::
$ dworker scheduler-ip:port
**State**
* **data:** ``{key: object}``:
Dictionary mapping keys to actual values
* **active:** ``{key}``:
Set of keys currently under computation
* **ncores:** ``int``:
Number of cores used by this worker process
* **executor:** ``concurrent.futures.ThreadPoolExecutor``:
Executor used to perform computation
* **local_dir:** ``path``:
Path on local machine to store temporary files
* **center:** ``rpc``:
Location of center or scheduler. See ``.ip/.port`` attributes.
* **name:** ``string``:
Alias
* **services:** ``{str: Server}``:
Auxiliary web servers running on this worker
* **service_ports:** ``{str: port}``:
Examples
--------
Create centers and workers in Python:
>>> from distributed import Center, Worker
>>> c = Center('192.168.0.100', 8787) # doctest: +SKIP
>>> w = Worker(c.ip, c.port) # doctest: +SKIP
>>> yield w._start(port=8788) # doctest: +SKIP
Or use the command line::
$ dcenter
Start center at 127.0.0.1:8787
$ dworker 127.0.0.1:8787
Start worker at: 127.0.0.1:8788
Registered with center at: 127.0.0.1:8787
See Also
--------
distributed.center.Center:
"""
def __init__(self,
center_ip,
center_port,
ip=None,
ncores=None,
loop=None,
local_dir=None,
services=None,
service_ports=None,
name=None,
**kwargs):
self.ip = ip or get_ip()
self._port = 0
self.ncores = ncores or _ncores
self.data = dict()
self.loop = loop or IOLoop.current()
self.status = None
self.local_dir = local_dir or tempfile.mkdtemp(prefix='worker-')
self.executor = ThreadPoolExecutor(self.ncores)
self.thread_tokens = Queue(
) # https://github.com/tornadoweb/tornado/issues/1595#issuecomment-198551572
for i in range(self.ncores):
self.thread_tokens.put_nowait(i)
self.center = rpc(ip=center_ip, port=center_port)
self.active = set()
self.name = name
if not os.path.exists(self.local_dir):
os.mkdir(self.local_dir)
if self.local_dir not in sys.path:
sys.path.insert(0, self.local_dir)
self.services = {}
self.service_ports = service_ports or {}
for k, v in (services or {}).items():
if isinstance(k, tuple):
k, port = k
else:
port = 0
self.services[k] = v(self)
self.services[k].listen(port)
self.service_ports[k] = self.services[k].port
handlers = {
'compute': self.compute,
'gather': self.gather,
'compute-stream': self.compute_stream,
'run': self.run,
'get_data': self.get_data,
'update_data': self.update_data,
'delete_data': self.delete_data,
'terminate': self.terminate,
'ping': pingpong,
'health': self.health,
'upload_file': self.upload_file
}
super(Worker, self).__init__(handlers, **kwargs)
@gen.coroutine
def _start(self, port=0):
self.listen(port)
self.name = self.name or self.address
for k, v in self.services.items():
v.listen(0)
self.service_ports[k] = v.port
logger.info(' Start worker at: %20s:%d', self.ip, self.port)
for k, v in self.service_ports.items():
logger.info(' %16s at: %20s:%d' % (k, self.ip, v))
logger.info('Waiting to connect to: %20s:%d', self.center.ip,
self.center.port)
while True:
try:
resp = yield self.center.register(ncores=self.ncores,
address=(self.ip, self.port),
keys=list(self.data),
services=self.service_ports,
name=self.name)
break
except (OSError, StreamClosedError):
logger.debug("Unable to register with scheduler. Waiting")
yield gen.sleep(0.5)
if resp != 'OK':
raise ValueError(resp)
logger.info(' Registered to: %20s:%d', self.center.ip,
self.center.port)
self.status = 'running'
def start(self, port=0):
self.loop.add_callback(self._start, port)
def identity(self, stream):
return {
'type': type(self).__name__,
'id': self.id,
'center': (self.center.ip, self.center.port)
}
@gen.coroutine
def _close(self, report=True, timeout=10):
if report:
yield gen.with_timeout(timedelta(seconds=timeout),
self.center.unregister(address=(self.ip,
self.port)),
io_loop=self.loop)
self.center.close_streams()
self.stop()
self.executor.shutdown()
if os.path.exists(self.local_dir):
shutil.rmtree(self.local_dir)
for k, v in self.services.items():
v.stop()
self.status = 'closed'
self.stop()
@gen.coroutine
def terminate(self, stream, report=True):
yield self._close(report=report)
raise Return('OK')
@property
def address(self):
return '%s:%d' % (self.ip, self.port)
@property
def address_tuple(self):
return (self.ip, self.port)
@gen.coroutine
def gather(self, stream=None, who_has=None):
who_has = {
k: [coerce_to_address(addr) for addr in v]
for k, v in who_has.items() if k not in self.data
}
try:
result = yield gather_from_workers(who_has)
except KeyError as e:
logger.warn("Could not find data", e)
raise Return({'status': 'missing-data', 'keys': e.args})
else:
self.data.update(result)
raise Return({'status': 'OK'})
@gen.coroutine
def _ready_task(self,
function=None,
key=None,
args=(),
kwargs={},
task=None,
who_has=None):
who_has = who_has or {}
diagnostics = {}
data = {k: self.data[k] for k in who_has if k in self.data}
who_has = {
k: set(map(coerce_to_address, v))
for k, v in who_has.items() if k not in self.data
}
if who_has:
try:
logger.info("gather %d keys from peers: %s", len(who_has),
str(who_has))
diagnostics['transfer-start'] = time()
other = yield gather_from_workers(who_has)
diagnostics['transfer-stop'] = time()
self.data.update(other)
yield self.center.add_keys(address=self.address,
keys=list(other))
data.update(other)
except KeyError as e:
logger.warn("Could not find data for %s", key)
raise Return({
'status': 'missing-data',
'keys': e.args,
'key': key
})
else:
transfer_time = 0
try:
start = default_timer()
if task is not None:
task = loads(task)
if function is not None:
function = loads(function)
if args:
args = loads(args)
if kwargs:
kwargs = loads(kwargs)
diagnostics['deserialization'] = default_timer() - start
except Exception as e:
logger.warn("Could not deserialize task", exc_info=True)
raise Return(assoc(error_message(e), 'key', key))
if task is not None:
assert not function and not args and not kwargs
function = execute_task
args = (task, )
# Fill args with data
args2 = pack_data(args, data)
kwargs2 = pack_data(kwargs, data)
raise Return({
'status': 'OK',
'function': function,
'args': args2,
'kwargs': kwargs2,
'diagnostics': diagnostics,
'key': key
})
@gen.coroutine
def executor_submit(self, key, function, *args, **kwargs):
""" Safely run function in thread pool executor
We've run into issues running concurrent.future futures within
tornado. Apparently it's advantageous to use timeouts and periodic
callbacks to ensure things run smoothly. This can get tricky, so we
pull it off into an separate method.
"""
token = yield self.thread_tokens.get()
job_counter[0] += 1
i = job_counter[0]
# logger.info("%s:%d Starts job %d, %s", self.ip, self.port, i, key)
future = self.executor.submit(function, *args, **kwargs)
pc = PeriodicCallback(
lambda: logger.debug("future state: %s - %s", key, future._state),
1000)
pc.start()
try:
if sys.version_info < (3, 2):
yield future
else:
while not future.done() and future._state != 'FINISHED':
try:
yield gen.with_timeout(timedelta(seconds=1),
future,
io_loop=self.loop)
break
except gen.TimeoutError:
logger.info("work queue size: %d",
self.executor._work_queue.qsize())
logger.info("future state: %s", future._state)
logger.info("Pending job %d: %s", i, future)
finally:
pc.stop()
self.thread_tokens.put(token)
result = future.result()
logger.info("Finish job %d, %s", i, key)
raise gen.Return(result)
@gen.coroutine
def compute_stream(self, stream):
with log_errors():
logger.debug("Open compute stream")
bstream = BatchedSend(interval=10, loop=self.loop)
bstream.start(stream)
@gen.coroutine
def process(msg):
try:
result = yield self.compute(report=False, **msg)
bstream.send(result)
except Exception as e:
logger.exception(e)
bstream.send(assoc(error_message(e), 'key', msg.get('key')))
with log_errors():
while True:
try:
msgs = yield read(stream)
except StreamClosedError:
break
if not isinstance(msgs, list):
msgs = [msgs]
for msg in msgs:
op = msg.pop('op', None)
if op == 'close':
break
elif op == 'compute-task':
self.loop.add_callback(process, msg)
else:
logger.warning("Unknown operation %s, %s", op, msg)
yield bstream.close()
logger.info("Close compute stream")
@gen.coroutine
def compute(self,
stream=None,
function=None,
key=None,
args=(),
kwargs={},
task=None,
who_has=None,
report=True):
""" Execute function """
self.active.add(key)
# Ready function for computation
msg = yield self._ready_task(function=function,
key=key,
args=args,
kwargs=kwargs,
task=task,
who_has=who_has)
if msg['status'] != 'OK':
try:
self.active.remove(key)
except KeyError:
pass
raise Return(msg)
else:
function = msg['function']
args = msg['args']
kwargs = msg['kwargs']
# Log and compute in separate thread
result = yield self.executor_submit(key, apply_function, function,
args, kwargs)
result['key'] = key
result.update(msg['diagnostics'])
if result['status'] == 'OK':
self.data[key] = result.pop('result')
if report:
response = yield self.center.add_keys(address=(self.ip,
self.port),
keys=[key])
if not response == 'OK':
logger.warn('Could not report results to center: %s',
str(response))
else:
logger.warn(
" Compute Failed\n"
"Function: %s\n"
"args: %s\n"
"kwargs: %s\n",
str(funcname(function))[:1000],
str(args)[:1000],
str(kwargs)[:1000],
exc_info=True)
logger.debug("Send compute response to scheduler: %s, %s", key, msg)
try:
self.active.remove(key)
except KeyError:
pass
raise Return(result)
@gen.coroutine
def run(self, stream, function=None, args=(), kwargs={}):
function = loads(function)
if args:
args = loads(args)
if kwargs:
kwargs = loads(kwargs)
try:
result = function(*args, **kwargs)
except Exception as e:
logger.warn(
" Run Failed\n"
"Function: %s\n"
"args: %s\n"
"kwargs: %s\n",
str(funcname(function))[:1000],
str(args)[:1000],
str(kwargs)[:1000],
exc_info=True)
response = error_message(e)
else:
response = {
'status': 'OK',
'result': dumps(result),
}
raise Return(response)
@gen.coroutine
def update_data(self, stream, data=None, report=True):
data = valmap(loads, data)
self.data.update(data)
if report:
response = yield self.center.add_keys(address=(self.ip, self.port),
keys=list(data))
assert response == 'OK'
info = {
'nbytes': {k: sizeof(v)
for k, v in data.items()},
'status': 'OK'
}
raise Return(info)
@gen.coroutine
def delete_data(self, stream, keys=None, report=True):
for key in keys:
if key in self.data:
del self.data[key]
logger.info("Deleted %d keys", len(keys))
if report:
logger.debug("Reporting loss of keys to center")
yield self.center.remove_keys(address=self.address,
keys=list(keys))
raise Return('OK')
def get_data(self, stream, keys=None):
return {k: dumps(self.data[k]) for k in keys if k in self.data}
def upload_file(self, stream, filename=None, data=None, load=True):
out_filename = os.path.join(self.local_dir, filename)
if isinstance(data, unicode):
data = data.encode()
with open(out_filename, 'wb') as f:
f.write(data)
f.flush()
if load:
try:
name, ext = os.path.splitext(filename)
if ext in ('.py', '.pyc'):
logger.info("Reload module %s from .py file", name)
name = name.split('-')[0]
reload(import_module(name))
if ext == '.egg':
sys.path.append(out_filename)
pkgs = pkg_resources.find_distributions(out_filename)
for pkg in pkgs:
logger.info("Load module %s from egg",
pkg.project_name)
reload(import_module(pkg.project_name))
if not pkgs:
logger.warning("Found no packages in egg file")
except Exception as e:
logger.exception(e)
return {'status': 'error', 'exception': dumps(e)}
return {'status': 'OK', 'nbytes': len(data)}
def health(self, stream=None):
""" Information about worker """
d = {
'active': len(self.active),
'stored': len(self.data),
'time': time()
}
try:
import psutil
mem = psutil.virtual_memory()
d.update({
'cpu': psutil.cpu_percent(),
'memory': mem.total,
'memory-percent': mem.percent
})
try:
net_io = psutil.net_io_counters()
d['network-send'] = net_io.bytes_sent - self._last_net_io.bytes_sent
d['network-recv'] = net_io.bytes_recv - self._last_net_io.bytes_recv
except AttributeError:
pass
self._last_net_io = net_io
try:
disk_io = psutil.disk_io_counters()
d['disk-read'] = disk_io.read_bytes - self._last_disk_io.read_bytes
d['disk-write'] = disk_io.write_bytes - self._last_disk_io.write_bytes
except AttributeError:
pass
self._last_disk_io = disk_io
except ImportError:
pass
return d
class Scheduler():
""" (public) Scheduler class. """
__slots__ = [
'unit', 'current_time', 'callback_process', 'data_in_queue',
'data_in_heap', 'tasks_queue', 'lock'
]
def __init__(self, unit_in_seconds, callback_process):
""" Initialize a scheduler.
:param unit_in_seconds: number of seconds to wait for each step.
:param callback_process: callback to call on every task.
Signature:
task_callback(task.data) -> bool
If callback return True, task is considered done and is removed from scheduler.
Otherwise, task is rescheduled for another delay.
"""
assert isinstance(unit_in_seconds, int) and unit_in_seconds > 0
assert callable(callback_process)
self.unit = unit_in_seconds
self.current_time = 0
self.callback_process = callback_process
self.data_in_heap = PriorityDict() # data => Deadline
self.data_in_queue = {
} # type: dict{object, _Task} # data => associated Task in queue
self.tasks_queue = Queue()
# Lock to modify this object safely inside one Tornado thread:
# http://www.tornadoweb.org/en/stable/locks.html
self.lock = Lock()
def _enqueue(self, task):
""" Put a task in queue of tasks to process now. """
self.data_in_queue[task.data] = task
self.tasks_queue.put_nowait(task)
@gen.coroutine
def has_data(self, data):
""" Return True if given data is associated to any task. """
with (yield self.lock.acquire()):
return data in self.data_in_heap or data in self.data_in_queue
@gen.coroutine
def get_info(self, data):
""" Return info about scheduling for given data, or None if data is not found. """
with (yield self.lock.acquire()):
deadline = None # type: _Deadline
if data in self.data_in_heap:
deadline = self.data_in_heap[data]
if data in self.data_in_queue:
deadline = self.data_in_queue[data].deadline
if deadline:
return SchedulerEvent(time_unit=self.unit,
time_added=deadline.start_time,
delay=deadline.delay,
current_time=self.current_time)
return None
@gen.coroutine
def add_data(self, data, nb_units_to_wait):
""" Add data with a non-null deadline. For null deadlines, use no_wait().
:param data: data to add
:param nb_units_to_wait: time to wait (in number of units)
"""
if not isinstance(nb_units_to_wait, int) or nb_units_to_wait <= 0:
raise exceptions.NaturalIntegerNotNullException()
with (yield self.lock.acquire()):
if data in self.data_in_heap or data in self.data_in_queue:
raise exceptions.AlreadyScheduledException()
# Add task to scheduler.
self.data_in_heap[data] = _Deadline(self.current_time,
nb_units_to_wait)
@gen.coroutine
def no_wait(self, data, nb_units_to_wait, processing_validator):
""" Add a data to be processed the sooner.
:param data: data to add
:param nb_units_to_wait: time to wait (in number of units) for data tasks after first task is executed.
If null (0), data is processed once (first time) and then dropped.
:param processing_validator: validator used to check if data can still be processed for the first time.
See documentation of class _ImmediateTask for more details.
"""
if not isinstance(nb_units_to_wait, int) or nb_units_to_wait < 0:
raise exceptions.NaturalIntegerException()
with (yield self.lock.acquire()):
if data in self.data_in_heap:
# Move data from heap to queue with new delay.
del self.data_in_heap[data]
self._enqueue(
_ImmediateTask(data, nb_units_to_wait,
processing_validator))
elif data in self.data_in_queue:
# Change delay for future scheduling.
self.data_in_queue[data].update_delay(nb_units_to_wait)
else:
# Add data to queue.
self._enqueue(
_ImmediateTask(data, nb_units_to_wait,
processing_validator))
@gen.coroutine
def remove_data(self, data):
""" Remove a data (and all associated tasks) from scheduler. """
with (yield self.lock.acquire()):
if data in self.data_in_heap:
del self.data_in_heap[data]
elif data in self.data_in_queue:
# Remove task from data_in_queue and invalidate it in queue.
self.data_in_queue.pop(data).valid = False
@gen.coroutine
def _step(self):
""" Compute a step (check and enqueue tasks to run now) in scheduler. """
with (yield self.lock.acquire()):
self.current_time += 1
while self.data_in_heap:
deadline, data = self.data_in_heap.smallest()
if deadline.deadline > self.current_time:
break
del self.data_in_heap[data]
self._enqueue(_Task(data, deadline))
@gen.coroutine
def schedule(self):
""" Main scheduler method (callback to register in ioloop). Wait for unit seconds and
run tasks after each wait time.
"""
while True:
yield gen.sleep(self.unit)
yield self._step()
@gen.coroutine
def process_tasks(self):
""" Main task processing method (callback to register in ioloop). Consume and process tasks in queue
and reschedule processed tasks when relevant.
A task is processed if associated data was not removed from scheduler.
A task is rescheduler if processing callback returns False (True meaning `task definitively done`)
AND if task deadline is not null.
"""
while True:
task = yield self.tasks_queue.get() # type: _Task
try:
if task.valid and (not isinstance(task, _ImmediateTask)
or task.can_still_process()):
if gen.is_coroutine_function(self.callback_process):
remove_data = yield self.callback_process(task.data)
else:
remove_data = self.callback_process(task.data)
remove_data = remove_data or not task.deadline.delay
with (yield self.lock.acquire()):
del self.data_in_queue[task.data]
if not remove_data:
self.data_in_heap[task.data] = _Deadline(
self.current_time, task.deadline.delay)
finally:
self.tasks_queue.task_done()
async def peer_worker(self, peers: Set[str], peers_to_check: Queue,
peers_to_check_set: Set[str],
attempted_contact: Set[str], results: List[bool]):
client = AsyncHTTPClient()
async for peer in peers_to_check:
if peer is None:
# Exit signal
return
if (peer in self.last_errored
and datetime.now().timestamp() - self.last_errored[peer] <
LAST_ERRORED_CACHE_TIME):
# Avoid repetitively hitting dead nodes
print(
f"[{SERVICE_NAME} {datetime.now()}] Skipping dead peer {peer}",
flush=True)
peers_to_check_set.remove(peer)
peers_to_check.task_done()
continue
if peer in attempted_contact:
peers_to_check_set.remove(peer)
peers_to_check.task_done()
continue
if peer in self.contacting:
print(
f"[{SERVICE_NAME} {datetime.now()}] Avoiding race on peer {peer}",
flush=True)
# TODO: Do we call task_done() here?
continue
self.contacting.add(peer)
print(f"[{SERVICE_NAME} {datetime.now()}] Contacting peer {peer}",
flush=True)
peer_peers: List[str] = []
try:
# TODO: Combine requests?
# Notify peer of current node's existence, OIDC realm, and peer list
await peer_fetch(
client=client,
peer=peer,
path_fragment=
"api/federation/peers", # TODO: This should probably be parametrized
request_body=json.dumps({
"peers":
list(peers),
"self":
CHORD_URL,
"oidc_discovery_uri":
OIDC_DISCOVERY_URI,
}))
# Fetch the peer's peer list
r = await peer_fetch(client=client,
peer=peer,
path_fragment="api/federation/peers",
method="GET")
# If a non-200 response is encountered, an error is raised
self.connected_to_peer_network = True
peer_peers = r["peers"]
except IndexError:
print(
f"[{SERVICE_NAME} {datetime.now()}] [ERROR] Invalid 200 response returned by {peer}.",
flush=True,
file=sys.stderr)
except (HTTPError, ValueError) as e:
# HTTPError: Standard 400s/500s
# ValueError: ex. Unsupported url scheme: api/federation/peers
now = datetime.now()
print(
f"[{SERVICE_NAME} {now}] [ERROR] Peer contact error for {peer} ({str(e)})",
flush=True,
file=sys.stderr)
self.last_errored[peer] = now.timestamp()
# Incorporate the peer's peer list into the current set of peers
peers = peers.union(peer_peers)
# Search for new peers, and if they exist add them to the queue containing peers to verify
new_peer = False
for p in peer_peers:
if p not in peers_to_check_set and p not in self.contacting and p not in attempted_contact:
new_peer = True
peers_to_check.put_nowait(p)
peers_to_check_set.add(p)
results.append(new_peer)
attempted_contact.add(peer)
self.contacting.remove(peer)
peers_to_check_set.remove(peer)
peers_to_check.task_done()
class Application(object):
def __init__(self, routes, node, pipe):
"""
Application instantiates and registers handlers for each message type,
and routes messages to the pre-instantiated instances of each message handler
:param routes: list of tuples in the form of (<message type str>, <MessageHandler class>)
:param node: Node instance of the local node
:param pipe: Instance of multiprocessing.Pipe for communicating with the parent process
"""
# We don't really have to worry about synchronization
# so long as we're careful about explicit context switching
self.nodes = {node.node_id: node}
self.local_node = node
self.handlers = {}
self.tcpclient = TCPClient()
self.gossip_inbox = Queue()
self.gossip_outbox = Queue()
self.sequence_number = 0
if routes:
self.add_handlers(routes)
self.pipe = pipe
self.ioloop = IOLoop.current()
self.add_node_event = Event()
def next_sequence_number(self):
self.sequence_number += 1
return self.sequence_number
@coroutine
def ping_random_node(self):
node = yield self.get_random_node()
LOGGER.debug('{} pinging random node: {}'.format(
self.local_node.node_id, node.node_id))
try:
yield self.ping(node)
except TimeoutError:
self.mark_suspect(node)
@coroutine
def add_node(self, node):
if node.node_id not in self.nodes:
LOGGER.debug('Adding node {} to {}'.format(node, self.nodes))
self.add_node_event.set()
self.nodes[node.node_id] = node
LOGGER.debug('Added node {} to {}'.format(node, self.nodes))
@coroutine
def remove_node(self, node):
if node.node_id in self.nodes:
del self.nodes[node.node_id]
other_nodes = yield self.get_other_nodes
if not other_nodes:
self.add_node_event.clear()
def add_handlers(self, handlers):
for message_type, handler_cls in handlers:
assert message_type in MESSAGE_TYPES, (
'Message type {!r} not found in MESSAGE TYPES {}'.format(
message_type, MESSAGE_TYPES.keys()))
self.handlers[message_type] = handler_cls(self)
def route_stream_message(self, stream, message_type, message):
LOGGER.debug('{!r} received {} message from {!r}'.format(
self, message_type, stream))
message_cls = MESSAGE_TYPES[message_type]
message_obj = message_cls(**message)
handler = self.handlers[message_type]
LOGGER.debug('Routing {} to {}'.format(message_type, handler))
handler(stream, message_obj)
@coroutine
def send_message(self, stream, message):
LOGGER.debug('Sending message {!r} to {}'.format(
message.MESSAGE_TYPE, stream))
try:
yield stream.write(message.to_msgpack)
except StreamClosedError:
LOGGER.warn('Unable to send {} to {} - stream closed'.format(
message.MESSAGE_TYPE, stream))
@coroutine
def _get_next_message(self, stream):
# get the next message from the stream
unpacker = msgpack.Unpacker()
try:
wire_bytes = yield with_timeout(
datetime.timedelta(seconds=PING_TIMEOUT),
stream.read_bytes(4096, partial=True))
except StreamClosedError:
LOGGER.warn(
'Unable to get next message from {} - stream closed'.format(
stream))
else:
unpacker.feed(wire_bytes)
LOGGER.debug('Deserializing object from stream {}'.format(stream))
message = unpacker.next()
message.pop('type')
raise Return(message)
@coroutine
def ping(self, node):
"""
Ping a node
:param node: Instance of Node to ping
:returns: Boolean, True if successful/False if fail
"""
host = node.addr
port = node.port
LOGGER.debug('pinging {}:{}'.format(host, port))
ping = Ping(seqno=self.next_sequence_number(),
node=node,
sender=self.local_node)
# Connect to the node
try:
stream = yield self.tcpclient.connect(host, port)
except StreamClosedError:
LOGGER.error(
'Unable to connect from {} to {} (pinging host)'.format(
self.local_node.node_id, node.node_id))
raise Return(False)
try:
# Send the ping
LOGGER.debug('Sending {!r} to {!r}'.format(ping.MESSAGE_TYPE,
node))
yield self.send_message(stream, ping)
# Wait for an ACK message in response
LOGGER.debug('Getting next message from {}:{}'.format(host, port))
message = yield self._get_next_message(stream)
if message is None:
raise Return(False)
ack = Ack(**message)
LOGGER.debug('Received {!r} from {!r} (response to {!r})'.format(
ack.MESSAGE_TYPE, node.node_id, ping.MESSAGE_TYPE))
# Check that the ACK sequence number matches the PING sequence number
if ack.seqno == ping.seqno:
LOGGER.debug(
'Sequence number matches. Node {} looks good to !'.format(
node.node_id, self.local_node.node_id))
# Process the gossip messages tacked onto the ACK message's payload
for message in ack.payload:
try:
self.gossip_inbox.put_nowait(message)
except QueueFull:
LOGGER.error(
'Unable to add {} message from {} to gossip inbox'.
format(message.MESSAGE_TYPE, node.node_id))
# mark the node as ALIVE in self.nodes
self.mark_alive(node)
# Send gossip that this node is alive
self.queue_gossip_send(Alive(node=node,
sender=self.local_node))
raise Return(True)
else:
raise Return(False)
finally:
stream.close()
@coroutine
def ack(self, stream, seqno):
payload = []
for _ in xrange(ACK_PAYLOAD_SIZE):
try:
gossip = self.gossip_outbox.get_nowait()
payload.append(gossip)
except QueueEmpty:
break
ack = Ack(seqno=seqno, payload=payload)
LOGGER.debug('Trying to send ack: {}'.format(ack))
try:
yield stream.write(ack.to_msgpack)
except StreamClosedError:
LOGGER.error(
'Unable to connect from {} to stream (acking PING)'.format(
self.local_node.node_id))
LOGGER.debug('Sent ack to {}'.format(stream))
@coroutine
def _change_node_state(self, node, state):
"""
Because Tornado has explicit context switching, we don't need to worry much about synchronization here
"""
LOGGER.debug('{} knows about {}: {}'.format(self.local_node.node_id,
node.node_id, state))
self.add_node(node)
self.nodes[node.node_id].state = state
@coroutine
def mark_alive(self, node):
if node.node_id != self.local_node.node_id:
LOGGER.debug('Marking {} ALIVE'.format(node.node_id))
self._change_node_state(node, State.ALIVE)
@coroutine
def mark_dead(self, node):
self._change_node_state(node, State.DEAD)
@coroutine
def mark_suspect(self, node):
self._change_node_state(node, State.SUSPECT)
@coroutine
def ingest_gossip_inbox(self):
while True:
LOGGER.debug('checking inbox')
message = yield self.gossip_inbox.get()
LOGGER.debug('Received message {} from gossip inbox'.format(
message.MESSAGE_TYPE))
if message.MESSAGE_TYPE == Alive.MESSAGE_TYPE:
self.mark_alive(message.sender)
self.mark_alive(message.node)
self.queue_gossip_send(message)
elif message.MESSAGE_TYPE == Suspect.MESSAGE_TYPE:
self.mark_alive(message.sender)
self.mark_suspect(message.node)
self.queue_gossip_send(message)
elif message.MESSAGE_TYPE == Dead.MESSAGE_TYPE:
self.mark_alive(message.sender)
self.mark_dead(message.node)
self.queue_gossip_send(message)
@coroutine
def queue_gossip_send(self, message):
"""
If the message is gossipable, add it to the outbox
"""
try:
next_incarnation = message.next_incarnation
next_incarnation.sender = self.local_node
except message.MaxIncarnationsReached:
LOGGER.debug(
'Max incarnations reached for {}! No gossip 4 u'.format(
message.MESSAGE_TYPE))
else:
LOGGER.debug('Enqueuing {} gossips for {}'.format(
GOSSIP_PEERS, message))
for _ in xrange(GOSSIP_PEERS):
yield self.gossip_outbox.put(next_incarnation)
@coroutine
def send_buffered_gossip(self):
while True:
random_node = yield self.get_random_node()
message = yield self.gossip_outbox.get()
LOGGER.debug('{} connecting to {} for gossip'.format(
self.local_node, random_node))
try:
stream = yield self.tcpclient.connect(random_node.addr,
random_node.port)
except StreamClosedError:
LOGGER.error(
'Unable to connect from {} to {} (sending gossip)'.format(
self.local_node.node_id, random_node.node_id))
LOGGER.warning('Putting the gossip back on our queue')
try:
self.gossip_outbox.put_nowait(message)
except QueueFull:
LOGGER.error(
'Unable to put gossip back onto the queue. Giving up!')
else:
try:
LOGGER.debug('{} gossipping with {}'.format(
self.local_node.node_id, random_node.node_id))
yield self.send_message(stream, message)
finally:
stream.close()
@coroutine
def get_other_nodes(self, exclude=None):
if exclude is None:
exclude = (self.local_node, )
exclude_node_ids = [n.node_id for n in exclude]
raise Return([n for n in self.nodes if n not in exclude_node_ids])
@coroutine
def get_random_node(self, exclude=None):
LOGGER.debug('Waiting for more nodes')
yield self.add_node_event.wait()
LOGGER.debug('Getting non-self random node')
other_nodes = yield self.get_other_nodes(exclude=exclude)
LOGGER.debug('{} got something! choices: {}'.format(
self.local_node.node_id, other_nodes))
assert other_nodes
node_id = random.choice(other_nodes)
raise Return(self.nodes[node_id])
async def post(self):
data_type_queries, join_query, exclude_from_auto_join = get_query_parts(
self.request.body)
if not data_type_queries:
self.set_status(400)
self.write(
bad_request_error(
"Invalid request format (missing body or data_type_queries)"
))
return
results = []
auth_header = get_auth_header(self.request.headers)
try:
# Try compiling each query to make sure it works. Any exceptions thrown will get caught below.
test_queries(data_type_queries.values())
client = AsyncHTTPClient()
# TODO: Handle pagination
# TODO: Why fetch projects instead of datasets? Is it to avoid "orphan" datasets? Is that even possible?
# Use Unix socket resolver
projects = await peer_fetch(client,
CHORD_URL,
"api/metadata/api/projects",
method="GET",
auth_header=auth_header,
extra_headers=DATASET_SEARCH_HEADERS)
datasets_dict: Dict[str, dict] = {
d["identifier"]: d
for p in projects["results"] for d in p["datasets"]
}
dataset_objects_dict: Dict[str, Dict[str, list]] = {
d: {}
for d in datasets_dict
}
dataset_object_schema = {"type": "object", "properties": {}}
dataset_join_queries: Dict[str, Query] = {
d: None
for d in datasets_dict
}
dataset_queue = Queue()
for dataset in datasets_dict.values():
dataset_queue.put_nowait(dataset)
# Spawn workers to handle asynchronous requests to various datasets
search_workers = tornado.gen.multi([
self.search_worker(
dataset_queue,
dataset_object_schema,
join_query,
data_type_queries,
exclude_from_auto_join,
auth_header,
dataset_objects_dict,
dataset_join_queries,
) for _ in range(WORKERS)
])
await dataset_queue.join()
print(
f"[{SERVICE_NAME} {datetime.now()}] Done fetching individual service search results.",
flush=True)
# Aggregate datasets into results list if they satisfy the queries
for dataset_id, dataset_results in dataset_objects_dict.items(
): # TODO: Worker
results.extend(
process_dataset_results(data_type_queries,
dataset_join_queries[dataset_id],
dataset_results,
datasets_dict[dataset_id],
dataset_object_schema,
include_internal_data=False))
self.write({"results": results})
await self.finish()
# Trigger exit for all search workers
for _ in range(WORKERS):
dataset_queue.put_nowait(None)
# Wait for workers to exit
await search_workers
except HTTPError as e:
# Metadata service error
# TODO: Better message
print(
f"[{SERVICE_NAME} {datetime.now()}] [ERROR] Error from service: {str(e)}",
file=sys.stderr,
flush=True)
self.set_status(500)
self.write(internal_server_error(f"Error from service: {str(e)}"))
except (TypeError, ValueError,
SyntaxError) as e: # errors from query processing
# TODO: Better / more compliant error message
# TODO: Move these up?
# TODO: Not guaranteed to be actually query-processing errors
self.set_status(400)
self.write(bad_request_error(
f"Query processing error: {str(e)}")) # TODO: Better message
print(
f"[{SERVICE_NAME} {datetime.now()}] [ERROR] Encountered query processing error: {str(e)}",
file=sys.stderr,
flush=True)
traceback.print_exc()
class Application(object):
def __init__(self, routes, node, pipe):
"""
Application instantiates and registers handlers for each message type,
and routes messages to the pre-instantiated instances of each message handler
:param routes: list of tuples in the form of (<message type str>, <MessageHandler class>)
:param node: Node instance of the local node
:param pipe: Instance of multiprocessing.Pipe for communicating with the parent process
"""
# We don't really have to worry about synchronization
# so long as we're careful about explicit context switching
self.nodes = {node.node_id: node}
self.local_node = node
self.handlers = {}
self.tcpclient = TCPClient()
self.gossip_inbox = Queue()
self.gossip_outbox = Queue()
self.sequence_number = 0
if routes:
self.add_handlers(routes)
self.pipe = pipe
self.ioloop = IOLoop.current()
self.add_node_event = Event()
def next_sequence_number(self):
self.sequence_number += 1
return self.sequence_number
@coroutine
def ping_random_node(self):
node = yield self.get_random_node()
LOGGER.debug('{} pinging random node: {}'.format(self.local_node.node_id,
node.node_id))
try:
yield self.ping(node)
except TimeoutError:
self.mark_suspect(node)
@coroutine
def add_node(self, node):
if node.node_id not in self.nodes:
LOGGER.debug('Adding node {} to {}'.format(node, self.nodes))
self.add_node_event.set()
self.nodes[node.node_id] = node
LOGGER.debug('Added node {} to {}'.format(node, self.nodes))
@coroutine
def remove_node(self, node):
if node.node_id in self.nodes:
del self.nodes[node.node_id]
other_nodes = yield self.get_other_nodes
if not other_nodes:
self.add_node_event.clear()
def add_handlers(self, handlers):
for message_type, handler_cls in handlers:
assert message_type in MESSAGE_TYPES, (
'Message type {!r} not found in MESSAGE TYPES {}'.format(
message_type,
MESSAGE_TYPES.keys()
)
)
self.handlers[message_type] = handler_cls(self)
def route_stream_message(self, stream, message_type, message):
LOGGER.debug('{!r} received {} message from {!r}'.format(self, message_type, stream))
message_cls = MESSAGE_TYPES[message_type]
message_obj = message_cls(**message)
handler = self.handlers[message_type]
LOGGER.debug('Routing {} to {}'.format(message_type, handler))
handler(stream, message_obj)
@coroutine
def send_message(self, stream, message):
LOGGER.debug('Sending message {!r} to {}'.format(message.MESSAGE_TYPE, stream))
try:
yield stream.write(message.to_msgpack)
except StreamClosedError:
LOGGER.warn('Unable to send {} to {} - stream closed'.format(message.MESSAGE_TYPE, stream))
@coroutine
def _get_next_message(self, stream):
# get the next message from the stream
unpacker = msgpack.Unpacker()
try:
wire_bytes = yield with_timeout(
datetime.timedelta(seconds=PING_TIMEOUT),
stream.read_bytes(4096, partial=True)
)
except StreamClosedError:
LOGGER.warn('Unable to get next message from {} - stream closed'.format(stream))
else:
unpacker.feed(wire_bytes)
LOGGER.debug('Deserializing object from stream {}'.format(stream))
message = unpacker.next()
message.pop('type')
raise Return(message)
@coroutine
def ping(self, node):
"""
Ping a node
:param node: Instance of Node to ping
:returns: Boolean, True if successful/False if fail
"""
host = node.addr
port = node.port
LOGGER.debug('pinging {}:{}'.format(host, port))
ping = Ping(seqno=self.next_sequence_number(),
node=node,
sender=self.local_node)
# Connect to the node
try:
stream = yield self.tcpclient.connect(host, port)
except StreamClosedError:
LOGGER.error('Unable to connect from {} to {} (pinging host)'.format(self.local_node.node_id, node.node_id))
raise Return(False)
try:
# Send the ping
LOGGER.debug('Sending {!r} to {!r}'.format(ping.MESSAGE_TYPE, node))
yield self.send_message(stream, ping)
# Wait for an ACK message in response
LOGGER.debug('Getting next message from {}:{}'.format(host, port))
message = yield self._get_next_message(stream)
if message is None:
raise Return(False)
ack = Ack(**message)
LOGGER.debug('Received {!r} from {!r} (response to {!r})'.format(ack.MESSAGE_TYPE,
node.node_id,
ping.MESSAGE_TYPE))
# Check that the ACK sequence number matches the PING sequence number
if ack.seqno == ping.seqno:
LOGGER.debug('Sequence number matches. Node {} looks good to !'.format(node.node_id,
self.local_node.node_id))
# Process the gossip messages tacked onto the ACK message's payload
for message in ack.payload:
try:
self.gossip_inbox.put_nowait(message)
except QueueFull:
LOGGER.error('Unable to add {} message from {} to gossip inbox'.format(message.MESSAGE_TYPE,
node.node_id))
# mark the node as ALIVE in self.nodes
self.mark_alive(node)
# Send gossip that this node is alive
self.queue_gossip_send(
Alive(node=node, sender=self.local_node)
)
raise Return(True)
else:
raise Return(False)
finally:
stream.close()
@coroutine
def ack(self, stream, seqno):
payload = []
for _ in xrange(ACK_PAYLOAD_SIZE):
try:
gossip = self.gossip_outbox.get_nowait()
payload.append(gossip)
except QueueEmpty:
break
ack = Ack(seqno=seqno, payload=payload)
LOGGER.debug('Trying to send ack: {}'.format(ack))
try:
yield stream.write(ack.to_msgpack)
except StreamClosedError:
LOGGER.error('Unable to connect from {} to stream (acking PING)'.format(self.local_node.node_id))
LOGGER.debug('Sent ack to {}'.format(stream))
@coroutine
def _change_node_state(self, node, state):
"""
Because Tornado has explicit context switching, we don't need to worry much about synchronization here
"""
LOGGER.debug('{} knows about {}: {}'.format(self.local_node.node_id, node.node_id, state))
self.add_node(node)
self.nodes[node.node_id].state = state
@coroutine
def mark_alive(self, node):
if node.node_id != self.local_node.node_id:
LOGGER.debug('Marking {} ALIVE'.format(node.node_id))
self._change_node_state(node, State.ALIVE)
@coroutine
def mark_dead(self, node):
self._change_node_state(node, State.DEAD)
@coroutine
def mark_suspect(self, node):
self._change_node_state(node, State.SUSPECT)
@coroutine
def ingest_gossip_inbox(self):
while True:
LOGGER.debug('checking inbox')
message = yield self.gossip_inbox.get()
LOGGER.debug('Received message {} from gossip inbox'.format(message.MESSAGE_TYPE))
if message.MESSAGE_TYPE == Alive.MESSAGE_TYPE:
self.mark_alive(message.sender)
self.mark_alive(message.node)
self.queue_gossip_send(message)
elif message.MESSAGE_TYPE == Suspect.MESSAGE_TYPE:
self.mark_alive(message.sender)
self.mark_suspect(message.node)
self.queue_gossip_send(message)
elif message.MESSAGE_TYPE == Dead.MESSAGE_TYPE:
self.mark_alive(message.sender)
self.mark_dead(message.node)
self.queue_gossip_send(message)
@coroutine
def queue_gossip_send(self, message):
"""
If the message is gossipable, add it to the outbox
"""
try:
next_incarnation = message.next_incarnation
next_incarnation.sender = self.local_node
except message.MaxIncarnationsReached:
LOGGER.debug('Max incarnations reached for {}! No gossip 4 u'.format(message.MESSAGE_TYPE))
else:
LOGGER.debug('Enqueuing {} gossips for {}'.format(GOSSIP_PEERS, message))
for _ in xrange(GOSSIP_PEERS):
yield self.gossip_outbox.put(next_incarnation)
@coroutine
def send_buffered_gossip(self):
while True:
random_node = yield self.get_random_node()
message = yield self.gossip_outbox.get()
LOGGER.debug('{} connecting to {} for gossip'.format(self.local_node, random_node))
try:
stream = yield self.tcpclient.connect(random_node.addr, random_node.port)
except StreamClosedError:
LOGGER.error('Unable to connect from {} to {} (sending gossip)'.format(self.local_node.node_id,
random_node.node_id))
LOGGER.warning('Putting the gossip back on our queue')
try:
self.gossip_outbox.put_nowait(message)
except QueueFull:
LOGGER.error('Unable to put gossip back onto the queue. Giving up!')
else:
try:
LOGGER.debug('{} gossipping with {}'.format(self.local_node.node_id, random_node.node_id))
yield self.send_message(stream, message)
finally:
stream.close()
@coroutine
def get_other_nodes(self, exclude=None):
if exclude is None:
exclude = (self.local_node,)
exclude_node_ids = [n.node_id for n in exclude]
raise Return([n for n in self.nodes if n not in exclude_node_ids])
@coroutine
def get_random_node(self, exclude=None):
LOGGER.debug('Waiting for more nodes')
yield self.add_node_event.wait()
LOGGER.debug('Getting non-self random node')
other_nodes = yield self.get_other_nodes(exclude=exclude)
LOGGER.debug('{} got something! choices: {}'.format(self.local_node.node_id, other_nodes))
assert other_nodes
node_id = random.choice(other_nodes)
raise Return(self.nodes[node_id])
class Executor(object):
""" Distributed executor with data dependencies
This executor resembles executors in concurrent.futures but also allows
Futures within submit/map calls.
Provide center address on initialization
>>> executor = Executor(('127.0.0.1', 8787)) # doctest: +SKIP
Use ``submit`` method like normal
>>> a = executor.submit(add, 1, 2) # doctest: +SKIP
>>> b = executor.submit(add, 10, 20) # doctest: +SKIP
Additionally, provide results of submit calls (futures) to further submit
calls:
>>> c = executor.submit(add, a, b) # doctest: +SKIP
This allows for the dynamic creation of complex dependencies.
"""
def __init__(self, center, start=True, delete_batch_time=1):
self.center = coerce_to_rpc(center)
self.futures = dict()
self.refcount = defaultdict(lambda: 0)
self.dask = dict()
self.restrictions = dict()
self.loop = IOLoop()
self.report_queue = Queue()
self.scheduler_queue = Queue()
self._shutdown_event = Event()
self._delete_batch_time = delete_batch_time
if start:
self.start()
def start(self):
""" Start scheduler running in separate thread """
from threading import Thread
self.loop.add_callback(self._go)
self._loop_thread = Thread(target=self.loop.start)
self._loop_thread.start()
def __enter__(self):
if not self.loop._running:
self.start()
return self
def __exit__(self, type, value, traceback):
self.shutdown()
def _inc_ref(self, key):
self.refcount[key] += 1
def _dec_ref(self, key):
self.refcount[key] -= 1
if self.refcount[key] == 0:
del self.refcount[key]
self._release_key(key)
def _release_key(self, key):
""" Release key from distributed memory """
self.futures[key]['event'].clear()
logger.debug("Release key %s", key)
del self.futures[key]
self.scheduler_queue.put_nowait({'op': 'release-held-data',
'key': key})
@gen.coroutine
def report(self):
""" Listen to scheduler """
while True:
msg = yield self.report_queue.get()
if msg['op'] == 'close':
break
if msg['op'] == 'task-finished':
if msg['key'] in self.futures:
self.futures[msg['key']]['status'] = 'finished'
self.futures[msg['key']]['event'].set()
if msg['op'] == 'lost-data':
if msg['key'] in self.futures:
self.futures[msg['key']]['status'] = 'lost'
self.futures[msg['key']]['event'].clear()
if msg['op'] == 'task-erred':
if msg['key'] in self.futures:
self.futures[msg['key']]['status'] = 'error'
self.futures[msg['key']]['event'].set()
@gen.coroutine
def _shutdown(self):
""" Send shutdown signal and wait until _go completes """
self.report_queue.put_nowait({'op': 'close'})
self.scheduler_queue.put_nowait({'op': 'close'})
yield self._shutdown_event.wait()
def shutdown(self):
""" Send shutdown signal and wait until scheduler terminates """
self.report_queue.put_nowait({'op': 'close'})
self.scheduler_queue.put_nowait({'op': 'close'})
self.loop.stop()
self._loop_thread.join()
@gen.coroutine
def _go(self):
""" Setup and run all other coroutines. Block until finished. """
self.who_has, self.has_what, self.ncores = yield [self.center.who_has(),
self.center.has_what(),
self.center.ncores()]
self.waiting = {}
self.processing = {}
self.stacks = {}
worker_queues = {worker: Queue() for worker in self.ncores}
delete_queue = Queue()
coroutines = ([
self.report(),
scheduler(self.scheduler_queue, self.report_queue, worker_queues,
delete_queue, self.who_has, self.has_what, self.ncores,
self.dask, self.restrictions, self.waiting, self.stacks,
self.processing),
delete(self.scheduler_queue, delete_queue,
self.center.ip, self.center.port, self._delete_batch_time)]
+ [worker(self.scheduler_queue, worker_queues[w], w, n)
for w, n in self.ncores.items()])
results = yield All(coroutines)
self._shutdown_event.set()
def submit(self, func, *args, **kwargs):
""" Submit a function application to the scheduler
Parameters
----------
func: callable
*args:
**kwargs:
pure: bool (defaults to True)
Whether or not the function is pure. Set ``pure=False`` for
impure functions like ``np.random.random``.
workers: set, iterable of sets
A set of worker hostnames on which computations may be performed.
Leave empty to default to all workers (common case)
Examples
--------
>>> c = executor.submit(add, a, b) # doctest: +SKIP
Returns
-------
Future
See Also
--------
distributed.executor.Executor.submit:
"""
if not callable(func):
raise TypeError("First input to submit must be a callable function")
key = kwargs.pop('key', None)
pure = kwargs.pop('pure', True)
workers = kwargs.pop('workers', None)
if key is None:
if pure:
key = funcname(func) + '-' + tokenize(func, kwargs, *args)
else:
key = funcname(func) + '-' + next(tokens)
if key in self.futures:
return Future(key, self)
if kwargs:
task = (apply, func, args, kwargs)
else:
task = (func,) + args
if workers is not None:
restrictions = {key: workers}
else:
restrictions = {}
if key not in self.futures:
self.futures[key] = {'event': Event(), 'status': 'waiting'}
logger.debug("Submit %s(...), %s", funcname(func), key)
self.scheduler_queue.put_nowait({'op': 'update-graph',
'dsk': {key: task},
'keys': [key],
'restrictions': restrictions})
return Future(key, self)
def map(self, func, *iterables, **kwargs):
""" Map a function on a sequence of arguments
Arguments can be normal objects or Futures
Parameters
----------
func: callable
iterables: Iterables
pure: bool (defaults to True)
Whether or not the function is pure. Set ``pure=False`` for
impure functions like ``np.random.random``.
workers: set, iterable of sets
A set of worker hostnames on which computations may be performed.
Leave empty to default to all workers (common case)
Examples
--------
>>> L = executor.map(func, sequence) # doctest: +SKIP
Returns
-------
list of futures
See also
--------
distributed.executor.Executor.submit
"""
pure = kwargs.pop('pure', True)
workers = kwargs.pop('workers', None)
if not callable(func):
raise TypeError("First input to map must be a callable function")
iterables = [list(it) for it in iterables]
if pure:
keys = [funcname(func) + '-' + tokenize(func, kwargs, *args)
for args in zip(*iterables)]
else:
uid = str(uuid.uuid4())
keys = [funcname(func) + '-' + uid + '-' + next(tokens)
for i in range(min(map(len, iterables)))]
if not kwargs:
dsk = {key: (func,) + args
for key, args in zip(keys, zip(*iterables))}
else:
dsk = {key: (apply, func, args, kwargs)
for key, args in zip(keys, zip(*iterables))}
for key in dsk:
if key not in self.futures:
self.futures[key] = {'event': Event(), 'status': 'waiting'}
if isinstance(workers, (list, set)):
if workers and isinstance(first(workers), (list, set)):
if len(workers) != len(keys):
raise ValueError("You only provided %d worker restrictions"
" for a sequence of length %d" % (len(workers), len(keys)))
restrictions = dict(zip(keys, workers))
else:
restrictions = {key: workers for key in keys}
elif workers is None:
restrictions = {}
else:
raise TypeError("Workers must be a list or set of workers or None")
logger.debug("map(%s, ...)", funcname(func))
self.scheduler_queue.put_nowait({'op': 'update-graph',
'dsk': dsk,
'keys': keys,
'restrictions': restrictions})
return [Future(key, self) for key in keys]
@gen.coroutine
def _gather(self, futures):
futures2, keys = unpack_remotedata(futures)
keys = list(keys)
while True:
yield All([self.futures[key]['event'].wait() for key in keys])
try:
data = yield _gather(self.center, keys)
except KeyError as e:
self.scheduler_queue.put_nowait({'op': 'missing-data',
'missing': e.args})
for key in e.args:
self.futures[key]['event'].clear()
else:
break
data = dict(zip(keys, data))
result = pack_data(futures2, data)
raise gen.Return(result)
def gather(self, futures):
""" Gather futures from distributed memory
Accepts a future or any nested core container of futures
Examples
--------
>>> from operator import add # doctest: +SKIP
>>> e = Executor('127.0.0.1:8787') # doctest: +SKIP
>>> x = e.submit(add, 1, 2) # doctest: +SKIP
>>> e.gather(x) # doctest: +SKIP
3
>>> e.gather([x, [x], x]) # doctest: +SKIP
[3, [3], 3]
"""
return sync(self.loop, self._gather, futures)
@gen.coroutine
def _get(self, dsk, keys, restrictions=None):
flatkeys = list(flatten(keys))
for key in flatkeys:
if key not in self.futures:
self.futures[key] = {'event': Event(), 'status': None}
futures = {key: Future(key, self) for key in flatkeys}
self.scheduler_queue.put_nowait({'op': 'update-graph',
'dsk': dsk,
'keys': flatkeys,
'restrictions': restrictions or {}})
packed = pack_data(keys, futures)
result = yield self._gather(packed)
raise gen.Return(result)
def get(self, dsk, keys, **kwargs):
""" Gather futures from distributed memory
Parameters
----------
dsk: dict
keys: object, or nested lists of objects
restrictions: dict (optional)
A mapping of {key: {set of worker hostnames}} that restricts where
jobs can take place
Examples
--------
>>> from operator import add # doctest: +SKIP
>>> e = Executor('127.0.0.1:8787') # doctest: +SKIP
>>> e.get({'x': (add, 1, 2)}, 'x') # doctest: +SKIP
3
"""
return sync(self.loop, self._get, dsk, keys, **kwargs)
class Executor(object):
""" Distributed executor with data dependencies
This executor resembles executors in concurrent.futures but also allows
Futures within submit/map calls.
Provide center address on initialization
>>> executor = Executor(('127.0.0.1', 8787)) # doctest: +SKIP
Use ``submit`` method like normal
>>> a = executor.submit(add, 1, 2) # doctest: +SKIP
>>> b = executor.submit(add, 10, 20) # doctest: +SKIP
Additionally, provide results of submit calls (futures) to further submit
calls:
>>> c = executor.submit(add, a, b) # doctest: +SKIP
This allows for the dynamic creation of complex dependencies.
"""
def __init__(self, center, start=True, delete_batch_time=1):
self.center = coerce_to_rpc(center)
self.futures = dict()
self.refcount = defaultdict(lambda: 0)
self.dask = dict()
self.restrictions = dict()
self.loop = IOLoop()
self.report_queue = Queue()
self.scheduler_queue = Queue()
self._shutdown_event = Event()
self._delete_batch_time = delete_batch_time
if start:
self.start()
def start(self):
""" Start scheduler running in separate thread """
from threading import Thread
self.loop.add_callback(self._go)
self._loop_thread = Thread(target=self.loop.start)
self._loop_thread.start()
def __enter__(self):
if not self.loop._running:
self.start()
return self
def __exit__(self, type, value, traceback):
self.shutdown()
def _inc_ref(self, key):
self.refcount[key] += 1
def _dec_ref(self, key):
self.refcount[key] -= 1
if self.refcount[key] == 0:
del self.refcount[key]
self._release_key(key)
def _release_key(self, key):
""" Release key from distributed memory """
self.futures[key]['event'].clear()
logger.debug("Release key %s", key)
del self.futures[key]
self.scheduler_queue.put_nowait({
'op': 'release-held-data',
'key': key
})
@gen.coroutine
def report(self):
""" Listen to scheduler """
while True:
msg = yield self.report_queue.get()
if msg['op'] == 'close':
break
if msg['op'] == 'task-finished':
if msg['key'] in self.futures:
self.futures[msg['key']]['status'] = 'finished'
self.futures[msg['key']]['event'].set()
if msg['op'] == 'lost-data':
if msg['key'] in self.futures:
self.futures[msg['key']]['status'] = 'lost'
self.futures[msg['key']]['event'].clear()
if msg['op'] == 'task-erred':
if msg['key'] in self.futures:
self.futures[msg['key']]['status'] = 'error'
self.futures[msg['key']]['event'].set()
@gen.coroutine
def _shutdown(self):
""" Send shutdown signal and wait until _go completes """
self.report_queue.put_nowait({'op': 'close'})
self.scheduler_queue.put_nowait({'op': 'close'})
yield self._shutdown_event.wait()
def shutdown(self):
""" Send shutdown signal and wait until scheduler terminates """
self.report_queue.put_nowait({'op': 'close'})
self.scheduler_queue.put_nowait({'op': 'close'})
self.loop.stop()
self._loop_thread.join()
@gen.coroutine
def _go(self):
""" Setup and run all other coroutines. Block until finished. """
self.who_has, self.has_what, self.ncores = yield [
self.center.who_has(),
self.center.has_what(),
self.center.ncores()
]
self.waiting = {}
self.processing = {}
self.stacks = {}
worker_queues = {worker: Queue() for worker in self.ncores}
delete_queue = Queue()
coroutines = ([
self.report(),
scheduler(self.scheduler_queue, self.report_queue, worker_queues,
delete_queue, self.who_has, self.has_what, self.ncores,
self.dask, self.restrictions, self.waiting, self.stacks,
self.processing),
delete(self.scheduler_queue, delete_queue, self.center.ip,
self.center.port, self._delete_batch_time)
] + [
worker(self.scheduler_queue, worker_queues[w], w, n)
for w, n in self.ncores.items()
])
results = yield All(coroutines)
self._shutdown_event.set()
def submit(self, func, *args, **kwargs):
""" Submit a function application to the scheduler
Parameters
----------
func: callable
*args:
**kwargs:
pure: bool (defaults to True)
Whether or not the function is pure. Set ``pure=False`` for
impure functions like ``np.random.random``.
workers: set, iterable of sets
A set of worker hostnames on which computations may be performed.
Leave empty to default to all workers (common case)
Examples
--------
>>> c = executor.submit(add, a, b) # doctest: +SKIP
Returns
-------
Future
See Also
--------
distributed.executor.Executor.submit:
"""
if not callable(func):
raise TypeError(
"First input to submit must be a callable function")
key = kwargs.pop('key', None)
pure = kwargs.pop('pure', True)
workers = kwargs.pop('workers', None)
if key is None:
if pure:
key = funcname(func) + '-' + tokenize(func, kwargs, *args)
else:
key = funcname(func) + '-' + next(tokens)
if key in self.futures:
return Future(key, self)
if kwargs:
task = (apply, func, args, kwargs)
else:
task = (func, ) + args
if workers is not None:
restrictions = {key: workers}
else:
restrictions = {}
if key not in self.futures:
self.futures[key] = {'event': Event(), 'status': 'waiting'}
logger.debug("Submit %s(...), %s", funcname(func), key)
self.scheduler_queue.put_nowait({
'op': 'update-graph',
'dsk': {
key: task
},
'keys': [key],
'restrictions': restrictions
})
return Future(key, self)
def map(self, func, *iterables, **kwargs):
""" Map a function on a sequence of arguments
Arguments can be normal objects or Futures
Parameters
----------
func: callable
iterables: Iterables
pure: bool (defaults to True)
Whether or not the function is pure. Set ``pure=False`` for
impure functions like ``np.random.random``.
workers: set, iterable of sets
A set of worker hostnames on which computations may be performed.
Leave empty to default to all workers (common case)
Examples
--------
>>> L = executor.map(func, sequence) # doctest: +SKIP
Returns
-------
list of futures
See also
--------
distributed.executor.Executor.submit
"""
pure = kwargs.pop('pure', True)
workers = kwargs.pop('workers', None)
if not callable(func):
raise TypeError("First input to map must be a callable function")
iterables = [list(it) for it in iterables]
if pure:
keys = [
funcname(func) + '-' + tokenize(func, kwargs, *args)
for args in zip(*iterables)
]
else:
uid = str(uuid.uuid4())
keys = [
funcname(func) + '-' + uid + '-' + next(tokens)
for i in range(min(map(len, iterables)))
]
if not kwargs:
dsk = {
key: (func, ) + args
for key, args in zip(keys, zip(*iterables))
}
else:
dsk = {
key: (apply, func, args, kwargs)
for key, args in zip(keys, zip(*iterables))
}
for key in dsk:
if key not in self.futures:
self.futures[key] = {'event': Event(), 'status': 'waiting'}
if isinstance(workers, (list, set)):
if workers and isinstance(first(workers), (list, set)):
if len(workers) != len(keys):
raise ValueError("You only provided %d worker restrictions"
" for a sequence of length %d" %
(len(workers), len(keys)))
restrictions = dict(zip(keys, workers))
else:
restrictions = {key: workers for key in keys}
elif workers is None:
restrictions = {}
else:
raise TypeError("Workers must be a list or set of workers or None")
logger.debug("map(%s, ...)", funcname(func))
self.scheduler_queue.put_nowait({
'op': 'update-graph',
'dsk': dsk,
'keys': keys,
'restrictions': restrictions
})
return [Future(key, self) for key in keys]
@gen.coroutine
def _gather(self, futures):
futures2, keys = unpack_remotedata(futures)
keys = list(keys)
while True:
yield All([self.futures[key]['event'].wait() for key in keys])
try:
data = yield _gather(self.center, keys)
except KeyError as e:
self.scheduler_queue.put_nowait({
'op': 'missing-data',
'missing': e.args
})
for key in e.args:
self.futures[key]['event'].clear()
else:
break
data = dict(zip(keys, data))
result = pack_data(futures2, data)
raise gen.Return(result)
def gather(self, futures):
""" Gather futures from distributed memory
Accepts a future or any nested core container of futures
Examples
--------
>>> from operator import add # doctest: +SKIP
>>> e = Executor('127.0.0.1:8787') # doctest: +SKIP
>>> x = e.submit(add, 1, 2) # doctest: +SKIP
>>> e.gather(x) # doctest: +SKIP
3
>>> e.gather([x, [x], x]) # doctest: +SKIP
[3, [3], 3]
"""
return sync(self.loop, self._gather, futures)
@gen.coroutine
def _get(self, dsk, keys, restrictions=None):
flatkeys = list(flatten(keys))
for key in flatkeys:
if key not in self.futures:
self.futures[key] = {'event': Event(), 'status': None}
futures = {key: Future(key, self) for key in flatkeys}
self.scheduler_queue.put_nowait({
'op': 'update-graph',
'dsk': dsk,
'keys': flatkeys,
'restrictions': restrictions or {}
})
packed = pack_data(keys, futures)
result = yield self._gather(packed)
raise gen.Return(result)
def get(self, dsk, keys, **kwargs):
""" Gather futures from distributed memory
Parameters
----------
dsk: dict
keys: object, or nested lists of objects
restrictions: dict (optional)
A mapping of {key: {set of worker hostnames}} that restricts where
jobs can take place
Examples
--------
>>> from operator import add # doctest: +SKIP
>>> e = Executor('127.0.0.1:8787') # doctest: +SKIP
>>> e.get({'x': (add, 1, 2)}, 'x') # doctest: +SKIP
3
"""
return sync(self.loop, self._get, dsk, keys, **kwargs)
class CommandTopic(object):
def __init__(self, topic_name, maxsize=10):
self.topic_name = topic_name
self.q_maxsize = maxsize
self.q = Queue(maxsize=maxsize)
self.sem = BoundedSemaphoreWithValue(1)
self.mid_gen = _MidGenerator()
self.gc_flag = False
self.io_loop = ioloop.IOLoop.current()
def issue(self, ft, cmd, block, timeout):
if 'mid' not in cmd:
cmd['mid'] = next(self.mid_gen)
try:
h_timeout = self.io_loop.call_later(timeout, self.cmd_timeout, ft,
cmd)
ft.add_done_callback(
lambda _: self.io_loop.remove_timeout(h_timeout))
# [ft, cmd, block]
self.q.put_nowait([ft, cmd, block])
except Exception as e:
ft.set_exception(e)
return ft
def cmd_timeout(self, ft, cmd):
ft.set_exception(
gen.TimeoutError(
'Timeout in waiting response of command: {}'.format(str(cmd))))
@gen.coroutine
def start_cmd(self):
yield self.sem.acquire()
item = yield self.q.get()
if not item:
self.sem.release()
raise gen.Return(None)
self.queue_item_under_process = item
ft, cmd, block = item
# a special case should be handled:
# the network is very slow so the future timed out before semaphore acquirement is done
if ft.done():
raise gen.Return(None)
ft.add_done_callback(lambda _: self.sem.release())
if not block: # notification type cmd, dont wait response
ft.set_result(None)
raise gen.Return(cmd)
def finish_cmd(self, mid, resp):
ft, cmd, block = self.queue_item_under_process
if not ft.done() and mid == cmd['mid']:
ft.set_result(resp)
def start_listen(self):
if self.sem.value() == 0:
self.q.put(None)
self.gc_flag = False
def stop_listen(self):
if hasattr(self, 'pending_item'):
ft, cmd, block = self.queue_item_under_process
if not ft.done():
ft.set_result(None)
self.q.put(None)
self.gc_flag = True
def is_marked_gc(self):
return self.gc_flag
class SubscribeListener(SubscribeCallback):
def __init__(self):
self.connected = False
self.connected_event = Event()
self.disconnected_event = Event()
self.presence_queue = Queue()
self.message_queue = Queue()
self.error_queue = Queue()
def status(self, pubnub, status):
if utils.is_subscribed_event(status) and not self.connected_event.is_set():
self.connected_event.set()
elif utils.is_unsubscribed_event(status) and not self.disconnected_event.is_set():
self.disconnected_event.set()
elif status.is_error():
self.error_queue.put_nowait(status.error_data.exception)
def message(self, pubnub, message):
self.message_queue.put(message)
def presence(self, pubnub, presence):
self.presence_queue.put(presence)
@tornado.gen.coroutine
def _wait_for(self, coro):
error = self.error_queue.get()
wi = tornado.gen.WaitIterator(coro, error)
while not wi.done():
result = yield wi.next()
if wi.current_future == coro:
raise gen.Return(result)
elif wi.current_future == error:
raise result
else:
raise Exception("Unexpected future resolved: %s" % str(wi.current_future))
@tornado.gen.coroutine
def wait_for_connect(self):
if not self.connected_event.is_set():
yield self._wait_for(self.connected_event.wait())
else:
raise Exception("instance is already connected")
@tornado.gen.coroutine
def wait_for_disconnect(self):
if not self.disconnected_event.is_set():
yield self._wait_for(self.disconnected_event.wait())
else:
raise Exception("instance is already disconnected")
@tornado.gen.coroutine
def wait_for_message_on(self, *channel_names):
channel_names = list(channel_names)
while True:
try: # NOQA
env = yield self._wait_for(self.message_queue.get())
if env.channel in channel_names:
raise tornado.gen.Return(env)
else:
continue
finally:
self.message_queue.task_done()
@tornado.gen.coroutine
def wait_for_presence_on(self, *channel_names):
channel_names = list(channel_names)
while True:
try:
try:
env = yield self._wait_for(self.presence_queue.get())
except: # NOQA E722 pylint: disable=W0702
break
if env.channel in channel_names:
raise tornado.gen.Return(env)
else:
continue
finally:
self.presence_queue.task_done()
class BatchedStream(object):
""" Mostly obsolete, see BatchedSend """
def __init__(self, stream, interval):
self.stream = stream
self.interval = interval / 1000.
self.last_transmission = default_timer()
self.send_q = Queue()
self.recv_q = Queue()
self._background_send_coroutine = self._background_send()
self._background_recv_coroutine = self._background_recv()
self._broken = None
self.pc = PeriodicCallback(lambda: None, 100)
self.pc.start()
@gen.coroutine
def _background_send(self):
with log_errors():
while True:
msg = yield self.send_q.get()
if msg == 'close':
break
msgs = [msg]
now = default_timer()
wait_time = self.last_transmission + self.interval - now
if wait_time > 0:
yield gen.sleep(wait_time)
while not self.send_q.empty():
msgs.append(self.send_q.get_nowait())
try:
yield write(self.stream, msgs)
except StreamClosedError:
self.recv_q.put_nowait('close')
self._broken = True
break
if len(msgs) > 1:
logger.debug("Batched messages: %d", len(msgs))
for _ in msgs:
self.send_q.task_done()
@gen.coroutine
def _background_recv(self):
with log_errors():
while True:
try:
msgs = yield read(self.stream)
except StreamClosedError:
self.recv_q.put_nowait('close')
self.send_q.put_nowait('close')
self._broken = True
break
assert isinstance(msgs, list)
if len(msgs) > 1:
logger.debug("Batched messages: %d", len(msgs))
for msg in msgs:
self.recv_q.put_nowait(msg)
@gen.coroutine
def flush(self):
yield self.send_q.join()
@gen.coroutine
def send(self, msg):
if self._broken:
raise StreamClosedError('Batch Stream is Closed')
else:
self.send_q.put_nowait(msg)
@gen.coroutine
def recv(self):
result = yield self.recv_q.get()
if result == 'close':
raise StreamClosedError('Batched Stream is Closed')
else:
raise gen.Return(result)
@gen.coroutine
def close(self):
yield self.flush()
raise gen.Return(self.stream.close())
def closed(self):
return self.stream.closed()
class TornadoTransmission():
def __init__(self, max_concurrent_batches=10, block_on_send=False,
block_on_response=False, max_batch_size=100, send_frequency=0.25,
user_agent_addition=''):
if not has_tornado:
raise ImportError('TornadoTransmission requires tornado, but it was not found.')
self.block_on_send = block_on_send
self.block_on_response = block_on_response
self.max_batch_size = max_batch_size
self.send_frequency = send_frequency
user_agent = "libhoney-py/" + VERSION
if user_agent_addition:
user_agent += " " + user_agent_addition
self.http_client = AsyncHTTPClient(
force_instance=True,
defaults=dict(user_agent=user_agent))
# libhoney adds events to the pending queue for us to send
self.pending = Queue(maxsize=1000)
# we hand back responses from the API on the responses queue
self.responses = Queue(maxsize=2000)
self.batch_data = {}
self.sd = statsd.StatsClient(prefix="libhoney")
self.batch_sem = Semaphore(max_concurrent_batches)
def start(self):
ioloop.IOLoop.current().spawn_callback(self._sender)
def send(self, ev):
'''send accepts an event and queues it to be sent'''
self.sd.gauge("queue_length", self.pending.qsize())
try:
if self.block_on_send:
self.pending.put(ev)
else:
self.pending.put_nowait(ev)
self.sd.incr("messages_queued")
except QueueFull:
response = {
"status_code": 0,
"duration": 0,
"metadata": ev.metadata,
"body": "",
"error": "event dropped; queue overflow",
}
if self.block_on_response:
self.responses.put(response)
else:
try:
self.responses.put_nowait(response)
except QueueFull:
# if the response queue is full when trying to add an event
# queue is full response, just skip it.
pass
self.sd.incr("queue_overflow")
# We're using the older decorator/yield model for compatibility with
# Python versions before 3.5.
# See: http://www.tornadoweb.org/en/stable/guide/coroutines.html#python-3-5-async-and-await
@gen.coroutine
def _sender(self):
'''_sender is the control loop that pulls events off the `self.pending`
queue and submits batches for actual sending. '''
events = []
last_flush = time.time()
while True:
try:
ev = yield self.pending.get(timeout=self.send_frequency)
if ev is None:
# signals shutdown
yield self._flush(events)
return
events.append(ev)
if (len(events) > self.max_batch_size or
time.time() - last_flush > self.send_frequency):
yield self._flush(events)
events = []
except TimeoutError:
yield self._flush(events)
events = []
last_flush = time.time()
@gen.coroutine
def _flush(self, events):
if not events:
return
for dest, group in group_events_by_destination(events).items():
yield self._send_batch(dest, group)
@gen.coroutine
def _send_batch(self, destination, events):
''' Makes a single batch API request with the given list of events. The
`destination` argument contains the write key, API host and dataset
name used to build the request.'''
start = time.time()
status_code = 0
try:
# enforce max_concurrent_batches
yield self.batch_sem.acquire()
url = urljoin(urljoin(destination.api_host, "/1/batch/"),
destination.dataset)
payload = []
for ev in events:
event_time = ev.created_at.isoformat()
if ev.created_at.tzinfo is None:
event_time += "Z"
payload.append({
"time": event_time,
"samplerate": ev.sample_rate,
"data": ev.fields()})
req = HTTPRequest(
url,
method='POST',
headers={
"X-Honeycomb-Team": destination.writekey,
"Content-Type": "application/json",
},
body=json.dumps(payload, default=json_default_handler),
)
self.http_client.fetch(req, self._response_callback)
# store the events that were sent so we can process responses later
# it is important that we delete these eventually, or we'll run into memory issues
self.batch_data[req] = {"start": start, "events": events}
except Exception as e:
# Catch all exceptions and hand them to the responses queue.
self._enqueue_errors(status_code, e, start, events)
finally:
self.batch_sem.release()
def _enqueue_errors(self, status_code, error, start, events):
for ev in events:
self.sd.incr("send_errors")
self._enqueue_response(status_code, "", error, start, ev.metadata)
def _response_callback(self, resp):
# resp.request should be the same HTTPRequest object built by _send_batch
# and mapped to values in batch_data
events = self.batch_data[resp.request]["events"]
start = self.batch_data[resp.request]["start"]
try:
status_code = resp.code
resp.rethrow()
statuses = [d["status"] for d in json.loads(resp.body)]
for ev, status in zip(events, statuses):
self._enqueue_response(status, "", None, start, ev.metadata)
self.sd.incr("messages_sent")
except Exception as e:
self._enqueue_errors(status_code, e, start, events)
self.sd.incr("send_errors")
finally:
# clean up the data for this batch
del self.batch_data[resp.request]
def _enqueue_response(self, status_code, body, error, start, metadata):
resp = {
"status_code": status_code,
"body": body,
"error": error,
"duration": (time.time() - start) * 1000,
"metadata": metadata
}
if self.block_on_response:
self.responses.put(resp)
else:
try:
self.responses.put_nowait(resp)
except QueueFull:
pass
def close(self):
'''call close to send all in-flight requests and shut down the
senders nicely. Times out after max 20 seconds per sending thread
plus 10 seconds for the response queue'''
try:
self.pending.put(None, 10)
except QueueFull:
pass
# signal to the responses queue that nothing more is coming.
try:
self.responses.put(None, 10)
except QueueFull:
pass
def get_response_queue(self):
''' return the responses queue on to which will be sent the response
objects from each event send'''
return self.responses
def f(c, a, b):
s = Scheduler((c.ip, c.port), loop=loop)
yield s._sync_center()
done = s.start()
sched, report = Queue(), Queue(); s.handle_queues(sched, report)
msg = yield report.get(); assert msg['op'] == 'stream-start'
s.update_graph(dsk={'x-1': (inc, 1),
'x-2': (inc, 'x-1'),
'x-3': (inc, 'x-2'),
'y-1': (dec, 'x-3'),
'y-2': (dec, 'y-1'),
'e': (throws, 'y-2'),
'other': (inc, 123)},
keys=['e'])
p = MultiProgressWidget(['e'], scheduler=s)
assert p.keys == {'x': {'x-1', 'x-2', 'x-3'},
'y': {'y-1', 'y-2'},
'e': {'e'}}
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'x-3':
break
assert p.keys == {'x': set(),
'y': {'y-1', 'y-2'},
'e': {'e'}}
p._update()
assert p.bars['x'].value == 1.0
assert p.bars['y'].value == 0.0
assert p.bars['e'].value == 0.0
assert '3 / 3' in p.texts['x'].value
assert '0 / 2' in p.texts['y'].value
assert '0 / 1' in p.texts['e'].value
while True:
msg = yield report.get()
if msg['op'] == 'key-in-memory' and msg['key'] == 'y-2':
break
p._update()
assert p.bars['x'].value == 1.0
assert p.bars['y'].value == 1.0
assert p.bars['e'].value == 0.0
assert p.keys == {'x': set(),
'y': set(),
'e': {'e'}}
while True:
msg = yield report.get()
if msg['op'] == 'task-erred' and msg['key'] == 'e':
break
assert p.bars['x'].bar_style == 'success'
assert p.bars['y'].bar_style == 'success'
assert p.bars['e'].bar_style == 'danger'
assert p.status == 'error'
sched.put_nowait({'op': 'close'})
yield done
class Kernel(SingletonConfigurable):
#---------------------------------------------------------------------------
# Kernel interface
#---------------------------------------------------------------------------
# attribute to override with a GUI
eventloop = Any(None)
@observe('eventloop')
def _update_eventloop(self, change):
"""schedule call to eventloop from IOLoop"""
loop = ioloop.IOLoop.current()
if change.new is not None:
loop.add_callback(self.enter_eventloop)
session = Instance(Session, allow_none=True)
profile_dir = Instance('IPython.core.profiledir.ProfileDir',
allow_none=True)
shell_stream = Instance(ZMQStream, allow_none=True)
shell_streams = List(
help="""Deprecated shell_streams alias. Use shell_stream
.. versionchanged:: 6.0
shell_streams is deprecated. Use shell_stream.
""")
@default("shell_streams")
def _shell_streams_default(self):
warnings.warn(
"Kernel.shell_streams is deprecated in yapkernel 6.0. Use Kernel.shell_stream",
DeprecationWarning,
stacklevel=2,
)
if self.shell_stream is not None:
return [self.shell_stream]
else:
return []
@observe("shell_streams")
def _shell_streams_changed(self, change):
warnings.warn(
"Kernel.shell_streams is deprecated in yapkernel 6.0. Use Kernel.shell_stream",
DeprecationWarning,
stacklevel=2,
)
if len(change.new) > 1:
warnings.warn(
"Kernel only supports one shell stream. Additional streams will be ignored.",
RuntimeWarning,
stacklevel=2,
)
if change.new:
self.shell_stream = change.new[0]
control_stream = Instance(ZMQStream, allow_none=True)
debug_shell_socket = Any()
control_thread = Any()
iopub_socket = Any()
iopub_thread = Any()
stdin_socket = Any()
log = Instance(logging.Logger, allow_none=True)
# identities:
int_id = Integer(-1)
ident = Unicode()
@default('ident')
def _default_ident(self):
return str(uuid.uuid4())
# This should be overridden by wrapper kernels that implement any real
# language.
language_info = {
'name': 'Prolog (YAP)',
'mimetype': 'text/x-prolog',
'file_extension': '.yap',
}
# any links that should go in the help menu
help_links = List()
# Private interface
_darwin_app_nap = Bool(
True,
help="""Whether to use appnope for compatibility with OS X App Nap.
Only affects OS X >= 10.9.
""").tag(config=True)
# track associations with current request
_allow_stdin = Bool(False)
_parents = Dict({"shell": {}, "control": {}})
_parent_ident = Dict({'shell': b'', 'control': b''})
@property
def _parent_header(self):
warnings.warn(
"Kernel._parent_header is deprecated in yapkernel 6. Use .get_parent()",
DeprecationWarning,
stacklevel=2,
)
return self.get_parent(channel="shell")
# Time to sleep after flushing the stdout/err buffers in each execute
# cycle. While this introduces a hard limit on the minimal latency of the
# execute cycle, it helps prevent output synchronization problems for
# clients.
# Units are in seconds. The minimum zmq latency on local host is probably
# ~150 microseconds, set this to 500us for now. We may need to increase it
# a little if it's not enough after more interactive testing.
_execute_sleep = Float(0.0005).tag(config=True)
# Frequency of the kernel's event loop.
# Units are in seconds, kernel subclasses for GUI toolkits may need to
# adapt to milliseconds.
_poll_interval = Float(0.01).tag(config=True)
stop_on_error_timeout = Float(
0.0,
config=True,
help="""time (in seconds) to wait for messages to arrive
when aborting queued requests after an error.
Requests that arrive within this window after an error
will be cancelled.
Increase in the event of unusually slow network
causing significant delays,
which can manifest as e.g. "Run all" in a notebook
aborting some, but not all, messages after an error.
""")
# If the shutdown was requested over the network, we leave here the
# necessary reply message so it can be sent by our registered atexit
# handler. This ensures that the reply is only sent to clients truly at
# the end of our shutdown process (which happens after the underlying
# IPython shell's own shutdown).
_shutdown_message = None
# This is a dict of port number that the kernel is listening on. It is set
# by record_ports and used by connect_request.
_recorded_ports = Dict()
# set of aborted msg_ids
aborted = Set()
# Track execution count here. For IPython, we override this to use the
# execution count we store in the shell.
execution_count = 0
msg_types = [
'execute_request',
'complete_request',
'inspect_request',
'history_request',
'comm_info_request',
'kernel_info_request',
'connect_request',
'shutdown_request',
'is_complete_request',
'interrupt_request',
# deprecated:
'apply_request',
]
# add deprecated ipyparallel control messages
control_msg_types = msg_types + [
'clear_request', 'abort_request', 'debug_request'
]
def __init__(self, **kwargs):
super(Kernel, self).__init__(**kwargs)
# Build dict of handlers for message types
self.shell_handlers = {}
for msg_type in self.msg_types:
self.shell_handlers[msg_type] = getattr(self, msg_type)
self.control_handlers = {}
for msg_type in self.control_msg_types:
self.control_handlers[msg_type] = getattr(self, msg_type)
self.control_queue = Queue()
def dispatch_control(self, msg):
self.control_queue.put_nowait(msg)
async def poll_control_queue(self):
while True:
msg = await self.control_queue.get()
# handle tracers from _flush_control_queue
if isinstance(msg, (concurrent.futures.Future, asyncio.Future)):
msg.set_result(None)
continue
await self.process_control(msg)
async def _flush_control_queue(self):
"""Flush the control queue, wait for processing of any pending messages"""
if self.control_thread:
control_loop = self.control_thread.io_loop
# concurrent.futures.Futures are threadsafe
# and can be used to await across threads
tracer_future = concurrent.futures.Future()
awaitable_future = asyncio.wrap_future(tracer_future)
else:
control_loop = self.io_loop
tracer_future = awaitable_future = asyncio.Future()
def _flush():
# control_stream.flush puts messages on the queue
self.control_stream.flush()
# put Future on the queue after all of those,
# so we can wait for all queued messages to be processed
self.control_queue.put(tracer_future)
control_loop.add_callback(_flush)
return awaitable_future
async def process_control(self, msg):
"""dispatch control requests"""
idents, msg = self.session.feed_identities(msg, copy=False)
try:
msg = self.session.deserialize(msg, content=True, copy=False)
except Exception:
self.log.error("Invalid Control Message", exc_info=True)
return
self.log.debug("Control received: %s", msg)
# Set the parent message for side effects.
self.set_parent(idents, msg, channel='control')
self._publish_status('busy', 'control')
header = msg['header']
msg_type = header['msg_type']
handler = self.control_handlers.get(msg_type, None)
if handler is None:
self.log.error("UNKNOWN CONTROL MESSAGE TYPE: %r", msg_type)
else:
try:
result = handler(self.control_stream, idents, msg)
if inspect.isawaitable(result):
await result
except Exception:
self.log.error("Exception in control handler:", exc_info=True)
sys.stdout.flush()
sys.stderr.flush()
self._publish_status('idle', 'control')
# flush to ensure reply is sent
self.control_stream.flush(zmq.POLLOUT)
def should_handle(self, stream, msg, idents):
"""Check whether a shell-channel message should be handled
Allows subclasses to prevent handling of certain messages (e.g. aborted requests).
"""
msg_id = msg['header']['msg_id']
if msg_id in self.aborted:
# is it safe to assume a msg_id will not be resubmitted?
self.aborted.remove(msg_id)
self._send_abort_reply(stream, msg, idents)
return False
return True
async def dispatch_shell(self, msg):
"""dispatch shell requests"""
# flush control queue before handling shell requests
await self._flush_control_queue()
idents, msg = self.session.feed_identities(msg, copy=False)
try:
msg = self.session.deserialize(msg, content=True, copy=False)
except Exception:
self.log.error("Invalid Message", exc_info=True)
return
# Set the parent message for side effects.
self.set_parent(idents, msg, channel='shell')
self._publish_status('busy', 'shell')
msg_type = msg['header']['msg_type']
# Only abort execute requests
if self._aborting and msg_type == 'execute_request':
self._send_abort_reply(self.shell_stream, msg, idents)
self._publish_status('idle', 'shell')
# flush to ensure reply is sent before
# handling the next request
self.shell_stream.flush(zmq.POLLOUT)
return
# Print some info about this message and leave a '--->' marker, so it's
# easier to trace visually the message chain when debugging. Each
# handler prints its message at the end.
self.log.debug('\n*** MESSAGE TYPE:%s***', msg_type)
self.log.debug(' Content: %s\n --->\n ', msg['content'])
if not self.should_handle(self.shell_stream, msg, idents):
return
handler = self.shell_handlers.get(msg_type, None)
if handler is None:
self.log.warning("Unknown message type: %r", msg_type)
else:
self.log.debug("%s: %s", msg_type, msg)
try:
self.pre_handler_hook()
except Exception:
self.log.debug("Unable to signal in pre_handler_hook:",
exc_info=True)
try:
result = handler(self.shell_stream, idents, msg)
if inspect.isawaitable(result):
await result
except Exception:
self.log.error("Exception in message handler:", exc_info=True)
except KeyboardInterrupt:
# Ctrl-c shouldn't crash the kernel here.
self.log.error("KeyboardInterrupt caught in kernel.")
finally:
try:
self.post_handler_hook()
except Exception:
self.log.debug("Unable to signal in post_handler_hook:",
exc_info=True)
sys.stdout.flush()
sys.stderr.flush()
self._publish_status('idle', 'shell')
# flush to ensure reply is sent before
# handling the next request
self.shell_stream.flush(zmq.POLLOUT)
def pre_handler_hook(self):
"""Hook to execute before calling message handler"""
# ensure default_int_handler during handler call
self.saved_sigint_handler = signal(SIGINT, default_int_handler)
def post_handler_hook(self):
"""Hook to execute after calling message handler"""
signal(SIGINT, self.saved_sigint_handler)
def enter_eventloop(self):
"""enter eventloop"""
self.log.info("Entering eventloop %s", self.eventloop)
# record handle, so we can check when this changes
eventloop = self.eventloop
if eventloop is None:
self.log.info("Exiting as there is no eventloop")
return
def advance_eventloop():
# check if eventloop changed:
if self.eventloop is not eventloop:
self.log.info("exiting eventloop %s", eventloop)
return
if self.msg_queue.qsize():
self.log.debug("Delaying eventloop due to waiting messages")
# still messages to process, make the eventloop wait
schedule_next()
return
self.log.debug("Advancing eventloop %s", eventloop)
try:
eventloop(self)
except KeyboardInterrupt:
# Ctrl-C shouldn't crash the kernel
self.log.error("KeyboardInterrupt caught in kernel")
pass
if self.eventloop is eventloop:
# schedule advance again
schedule_next()
def schedule_next():
"""Schedule the next advance of the eventloop"""
# flush the eventloop every so often,
# giving us a chance to handle messages in the meantime
self.log.debug("Scheduling eventloop advance")
self.io_loop.call_later(0.001, advance_eventloop)
# begin polling the eventloop
schedule_next()
async def do_one_iteration(self):
"""Process a single shell message
Any pending control messages will be flushed as well
.. versionchanged:: 5
This is now a coroutine
"""
# flush messages off of shell stream into the message queue
self.shell_stream.flush()
# process at most one shell message per iteration
await self.process_one(wait=False)
async def process_one(self, wait=True):
"""Process one request
Returns None if no message was handled.
"""
if wait:
t, dispatch, args = await self.msg_queue.get()
else:
try:
t, dispatch, args = self.msg_queue.get_nowait()
except asyncio.QueueEmpty:
return None
await dispatch(*args)
async def dispatch_queue(self):
"""Coroutine to preserve order of message handling
Ensures that only one message is processing at a time,
even when the handler is async
"""
while True:
try:
await self.process_one()
except Exception:
self.log.exception("Error in message handler")
_message_counter = Any(help="""Monotonic counter of messages
""", )
@default('_message_counter')
def _message_counter_default(self):
return itertools.count()
def schedule_dispatch(self, dispatch, *args):
"""schedule a message for dispatch"""
idx = next(self._message_counter)
self.msg_queue.put_nowait((
idx,
dispatch,
args,
))
# ensure the eventloop wakes up
self.io_loop.add_callback(lambda: None)
def start(self):
"""register dispatchers for streams"""
self.io_loop = ioloop.IOLoop.current()
self.msg_queue = Queue()
self.io_loop.add_callback(self.dispatch_queue)
self.control_stream.on_recv(self.dispatch_control, copy=False)
if self.control_thread:
control_loop = self.control_thread.io_loop
else:
control_loop = self.io_loop
asyncio.run_coroutine_threadsafe(self.poll_control_queue(),
control_loop.asyncio_loop)
self.shell_stream.on_recv(
partial(
self.schedule_dispatch,
self.dispatch_shell,
),
copy=False,
)
# publish idle status
self._publish_status('starting', 'shell')
def record_ports(self, ports):
"""Record the ports that this kernel is using.
The creator of the Kernel instance must call this methods if they
want the :meth:`connect_request` method to return the port numbers.
"""
self._recorded_ports = ports
#---------------------------------------------------------------------------
# Kernel request handlers
#---------------------------------------------------------------------------
def _publish_execute_input(self, code, parent, execution_count):
"""Publish the code request on the iopub stream."""
self.session.send(self.iopub_socket,
'execute_input', {
'code': code,
'execution_count': execution_count
},
parent=parent,
ident=self._topic('execute_input'))
def _publish_status(self, status, channel, parent=None):
"""send status (busy/idle) on IOPub"""
self.session.send(
self.iopub_socket,
"status",
{"execution_state": status},
parent=parent or self.get_parent(channel),
ident=self._topic("status"),
)
def _publish_debug_event(self, event):
self.session.send(
self.iopub_socket,
"debug_event",
event,
parent=self.get_parent("control"),
ident=self._topic("debug_event"),
)
def set_parent(self, ident, parent, channel='shell'):
"""Set the current parent request
Side effects (IOPub messages) and replies are associated with
the request that caused them via the parent_header.
The parent identity is used to route input_request messages
on the stdin channel.
"""
self._parent_ident[channel] = ident
self._parents[channel] = parent
def get_parent(self, channel="shell"):
"""Get the parent request associated with a channel.
.. versionadded:: 6
Parameters
----------
channel : str
the name of the channel ('shell' or 'control')
Returns
-------
message : dict
the parent message for the most recent request on the channel.
"""
return self._parents.get(channel, {})
def send_response(self,
stream,
msg_or_type,
content=None,
ident=None,
buffers=None,
track=False,
header=None,
metadata=None,
channel='shell'):
"""Send a response to the message we're currently processing.
This accepts all the parameters of :meth:`jupyter_client.session.Session.send`
except ``parent``.
This relies on :meth:`set_parent` having been called for the current
message.
"""
return self.session.send(
stream,
msg_or_type,
content,
self.get_parent(channel),
ident,
buffers,
track,
header,
metadata,
)
def init_metadata(self, parent):
"""Initialize metadata.
Run at the beginning of execution requests.
"""
# FIXME: `started` is part of ipyparallel
# Remove for yapkernel 5.0
return {
'started': now(),
}
def finish_metadata(self, parent, metadata, reply_content):
"""Finish populating metadata.
Run after completing an execution request.
"""
return metadata
async def execute_request(self, stream, ident, parent):
"""handle an execute_request"""
try:
content = parent['content']
code = content['code']
silent = content['silent']
store_history = content.get('store_history', not silent)
user_expressions = content.get('user_expressions', {})
allow_stdin = content.get('allow_stdin', False)
except Exception:
self.log.error("Got bad msg: ")
self.log.error("%s", parent)
return
stop_on_error = content.get('stop_on_error', True)
metadata = self.init_metadata(parent)
# Re-broadcast our input for the benefit of listening clients, and
# start computing output
if not silent:
self.execution_count += 1
self._publish_execute_input(code, parent, self.execution_count)
reply_content = self.do_execute(
code,
silent,
store_history,
user_expressions,
allow_stdin,
)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
# Flush output before sending the reply.
sys.stdout.flush()
sys.stderr.flush()
# FIXME: on rare occasions, the flush doesn't seem to make it to the
# clients... This seems to mitigate the problem, but we definitely need
# to better understand what's going on.
if self._execute_sleep:
time.sleep(self._execute_sleep)
# Send the reply.
reply_content = json_clean(reply_content)
metadata = self.finish_metadata(parent, metadata, reply_content)
reply_msg = self.session.send(stream,
'execute_reply',
reply_content,
parent,
metadata=metadata,
ident=ident)
self.log.debug("%s", reply_msg)
if not silent and reply_msg['content'][
'status'] == 'error' and stop_on_error:
await self._abort_queues()
def do_execute(self,
code,
silent,
store_history=True,
user_expressions=None,
allow_stdin=False):
"""Execute user code. Must be overridden by subclasses.
"""
raise NotImplementedError
async def complete_request(self, stream, ident, parent):
content = parent['content']
code = content['code']
cursor_pos = content['cursor_pos']
matches = self.do_complete(code, cursor_pos)
if inspect.isawaitable(matches):
matches = await matches
matches = json_clean(matches)
self.session.send(stream, "complete_reply", matches, parent, ident)
def do_complete(self, code, cursor_pos):
"""Override in subclasses to find completions.
"""
return {
'matches': [],
'cursor_end': cursor_pos,
'cursor_start': cursor_pos,
'metadata': {},
'status': 'ok'
}
async def inspect_request(self, stream, ident, parent):
content = parent['content']
reply_content = self.do_inspect(
content['code'],
content['cursor_pos'],
content.get('detail_level', 0),
)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
# Before we send this object over, we scrub it for JSON usage
reply_content = json_clean(reply_content)
msg = self.session.send(stream, 'inspect_reply', reply_content, parent,
ident)
self.log.debug("%s", msg)
def do_inspect(self, code, cursor_pos, detail_level=0):
"""Override in subclasses to allow introspection.
"""
return {'status': 'ok', 'data': {}, 'metadata': {}, 'found': False}
async def history_request(self, stream, ident, parent):
content = parent['content']
reply_content = self.do_history(**content)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
reply_content = json_clean(reply_content)
msg = self.session.send(stream, 'history_reply', reply_content, parent,
ident)
self.log.debug("%s", msg)
def do_history(self,
hist_access_type,
output,
raw,
session=None,
start=None,
stop=None,
n=None,
pattern=None,
unique=False):
"""Override in subclasses to access history.
"""
return {'status': 'ok', 'history': []}
async def connect_request(self, stream, ident, parent):
if self._recorded_ports is not None:
content = self._recorded_ports.copy()
else:
content = {}
content['status'] = 'ok'
msg = self.session.send(stream, 'connect_reply', content, parent,
ident)
self.log.debug("%s", msg)
@property
def kernel_info(self):
return {
'protocol_version': kernel_protocol_version,
'implementation': self.implementation,
'implementation_version': self.implementation_version,
'language_info': self.language_info,
'banner': self.banner,
'help_links': self.help_links,
}
async def kernel_info_request(self, stream, ident, parent):
content = {'status': 'ok'}
content.update(self.kernel_info)
msg = self.session.send(stream, 'kernel_info_reply', content, parent,
ident)
self.log.debug("%s", msg)
async def comm_info_request(self, stream, ident, parent):
content = parent['content']
target_name = content.get('target_name', None)
# Should this be moved to ipkernel?
if hasattr(self, 'comm_manager'):
comms = {
k: dict(target_name=v.target_name)
for (k, v) in self.comm_manager.comms.items()
if v.target_name == target_name or target_name is None
}
else:
comms = {}
reply_content = dict(comms=comms, status='ok')
msg = self.session.send(stream, 'comm_info_reply', reply_content,
parent, ident)
self.log.debug("%s", msg)
async def interrupt_request(self, stream, ident, parent):
pid = os.getpid()
pgid = os.getpgid(pid)
if os.name == "nt":
self.log.error("Interrupt message not supported on Windows")
else:
# Prefer process-group over process
if pgid and hasattr(os, "killpg"):
try:
os.killpg(pgid, SIGINT)
return
except OSError:
pass
try:
os.kill(pid, SIGINT)
except OSError:
pass
content = parent['content']
self.session.send(stream,
'interrupt_reply',
content,
parent,
ident=ident)
return
async def shutdown_request(self, stream, ident, parent):
content = self.do_shutdown(parent['content']['restart'])
if inspect.isawaitable(content):
content = await content
self.session.send(stream,
'shutdown_reply',
content,
parent,
ident=ident)
# same content, but different msg_id for broadcasting on IOPub
self._shutdown_message = self.session.msg('shutdown_reply', content,
parent)
self._at_shutdown()
self.log.debug('Stopping control ioloop')
control_io_loop = self.control_stream.io_loop
control_io_loop.add_callback(control_io_loop.stop)
self.log.debug('Stopping shell ioloop')
shell_io_loop = self.shell_stream.io_loop
shell_io_loop.add_callback(shell_io_loop.stop)
def do_shutdown(self, restart):
"""Override in subclasses to do things when the frontend shuts down the
kernel.
"""
return {'status': 'ok', 'restart': restart}
async def is_complete_request(self, stream, ident, parent):
content = parent['content']
code = content['code']
reply_content = self.do_is_complete(code)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
reply_content = json_clean(reply_content)
reply_msg = self.session.send(stream, 'is_complete_reply',
reply_content, parent, ident)
self.log.debug("%s", reply_msg)
def do_is_complete(self, code):
"""Override in subclasses to find completions.
"""
return {'status': 'unknown'}
async def debug_request(self, stream, ident, parent):
content = parent['content']
reply_content = self.do_debug_request(content)
if inspect.isawaitable(reply_content):
reply_content = await reply_content
reply_content = json_clean(reply_content)
reply_msg = self.session.send(stream, 'debug_reply', reply_content,
parent, ident)
self.log.debug("%s", reply_msg)
async def do_debug_request(self, msg):
raise NotImplementedError
#---------------------------------------------------------------------------
# Engine methods (DEPRECATED)
#---------------------------------------------------------------------------
async def apply_request(self, stream, ident, parent):
self.log.warning(
"apply_request is deprecated in kernel_base, moving to ipyparallel."
)
try:
content = parent['content']
bufs = parent['buffers']
msg_id = parent['header']['msg_id']
except Exception:
self.log.error("Got bad msg: %s", parent, exc_info=True)
return
md = self.init_metadata(parent)
reply_content, result_buf = self.do_apply(content, bufs, msg_id, md)
# flush i/o
sys.stdout.flush()
sys.stderr.flush()
md = self.finish_metadata(parent, md, reply_content)
self.session.send(stream,
'apply_reply',
reply_content,
parent=parent,
ident=ident,
buffers=result_buf,
metadata=md)
def do_apply(self, content, bufs, msg_id, reply_metadata):
"""DEPRECATED"""
raise NotImplementedError
#---------------------------------------------------------------------------
# Control messages (DEPRECATED)
#---------------------------------------------------------------------------
async def abort_request(self, stream, ident, parent):
"""abort a specific msg by id"""
self.log.warning(
"abort_request is deprecated in kernel_base. It is only part of IPython parallel"
)
msg_ids = parent['content'].get('msg_ids', None)
if isinstance(msg_ids, str):
msg_ids = [msg_ids]
if not msg_ids:
self._abort_queues()
for mid in msg_ids:
self.aborted.add(str(mid))
content = dict(status='ok')
reply_msg = self.session.send(stream,
'abort_reply',
content=content,
parent=parent,
ident=ident)
self.log.debug("%s", reply_msg)
async def clear_request(self, stream, idents, parent):
"""Clear our namespace."""
self.log.warning(
"clear_request is deprecated in kernel_base. It is only part of IPython parallel"
)
content = self.do_clear()
self.session.send(stream,
'clear_reply',
ident=idents,
parent=parent,
content=content)
def do_clear(self):
"""DEPRECATED since 4.0.3"""
raise NotImplementedError
#---------------------------------------------------------------------------
# Protected interface
#---------------------------------------------------------------------------
def _topic(self, topic):
"""prefixed topic for IOPub messages"""
base = "kernel.%s" % self.ident
return ("%s.%s" % (base, topic)).encode()
_aborting = Bool(False)
async def _abort_queues(self):
self.shell_stream.flush()
self._aborting = True
def stop_aborting():
self.log.info("Finishing abort")
self._aborting = False
asyncio.get_event_loop().call_later(self.stop_on_error_timeout,
stop_aborting)
def _send_abort_reply(self, stream, msg, idents):
"""Send a reply to an aborted request"""
self.log.info(
f"Aborting {msg['header']['msg_id']}: {msg['header']['msg_type']}")
reply_type = msg["header"]["msg_type"].rsplit("_", 1)[0] + "_reply"
status = {"status": "aborted"}
md = self.init_metadata(msg)
md = self.finish_metadata(msg, md, status)
md.update(status)
self.session.send(
stream,
reply_type,
metadata=md,
content=status,
parent=msg,
ident=idents,
)
def _no_raw_input(self):
"""Raise StdinNotImplementedError if active frontend doesn't support
stdin."""
raise StdinNotImplementedError("raw_input was called, but this "
"frontend does not support stdin.")
def getpass(self, prompt='', stream=None):
"""Forward getpass to frontends
Raises
------
StdinNotImplementedError if active frontend doesn't support stdin.
"""
if not self._allow_stdin:
raise StdinNotImplementedError(
"getpass was called, but this frontend does not support input requests."
)
if stream is not None:
import warnings
warnings.warn(
"The `stream` parameter of `getpass.getpass` will have no effect when using yapkernel",
UserWarning,
stacklevel=2,
)
return self._input_request(
prompt,
self._parent_ident["shell"],
self.get_parent("shell"),
password=True,
)
def raw_input(self, prompt=''):
"""Forward raw_input to frontends
Raises
------
StdinNotImplementedError if active frontend doesn't support stdin.
"""
if not self._allow_stdin:
raise StdinNotImplementedError(
"raw_input was called, but this frontend does not support input requests."
)
return self._input_request(
str(prompt),
self._parent_ident["shell"],
self.get_parent("shell"),
password=False,
)
def _input_request(self, prompt, ident, parent, password=False):
# Flush output before making the request.
sys.stderr.flush()
sys.stdout.flush()
# flush the stdin socket, to purge stale replies
while True:
try:
self.stdin_socket.recv_multipart(zmq.NOBLOCK)
except zmq.ZMQError as e:
if e.errno == zmq.EAGAIN:
break
else:
raise
# Send the input request.
content = json_clean(dict(prompt=prompt, password=password))
self.session.send(self.stdin_socket,
'input_request',
content,
parent,
ident=ident)
# Await a response.
while True:
try:
# Use polling with select() so KeyboardInterrupts can get
# through; doing a blocking recv() means stdin reads are
# uninterruptible on Windows. We need a timeout because
# zmq.select() is also uninterruptible, but at least this
# way reads get noticed immediately and KeyboardInterrupts
# get noticed fairly quickly by human response time standards.
rlist, _, xlist = zmq.select([self.stdin_socket], [],
[self.stdin_socket], 0.01)
if rlist or xlist:
ident, reply = self.session.recv(self.stdin_socket)
if (ident, reply) != (None, None):
break
except KeyboardInterrupt:
# re-raise KeyboardInterrupt, to truncate traceback
raise KeyboardInterrupt("Interrupted by user") from None
except Exception:
self.log.warning("Invalid Message:", exc_info=True)
try:
value = reply["content"]["value"]
except Exception:
self.log.error("Bad input_reply: %s", parent)
value = ''
if value == '\x04':
# EOF
raise EOFError
return value
def _at_shutdown(self):
"""Actions taken at shutdown by the kernel, called by python's atexit.
"""
if self._shutdown_message is not None:
self.session.send(self.iopub_socket,
self._shutdown_message,
ident=self._topic('shutdown'))
self.log.debug("%s", self._shutdown_message)
self.control_stream.flush(zmq.POLLOUT)
def iterable_to_queue(iterable: Iterable) -> Queue:
queue = Queue()
for item in iterable:
queue.put_nowait(item)
return queue
class Crawler(Index):
def __init__(self, openidList, max_tries=3, max_tasks=10, _loop=None):
self.loop = _loop or asyncio.get_event_loop() # 事件循环
self.max_tries = max_tries # 出错重试次数
self.max_tasks = max_tasks # 并发任务数
self.urls_queue = Queue(loop=self.loop) # 地址队列
self.ClientSession = aiohttp.ClientSession(
loop=self.loop) # aiohttp的session，get地址数据对象
for openid in openidList: # 将所有连接put到队列中
self.urls_queue.put_nowait(openid)
self.started_at = datetime.now() # 开始计时
self.end_at = None
def close(self): # 关闭aiohttp的Session对象
self.ClientSession.close()
async def handle(self, openid, bid, wxClass, unionArr, proveinList,
citiesList, self_db, logger):
tries = 0
while tries < self.max_tries: # 取不到数据会重试3次
try:
url = "https://api.weixin.qq.com/cgi-bin/user/info?access_token=" + wxClass.AccessToken + "&openid=" + openid + "&lang=zh_CN"
# with aiohttp.Timeout(2):
response = await self.ClientSession.get(url,
allow_redirects=False
) # 不禁用重定向的取数据
jsonArr = await response.json() # 异步接收返回数据
if 'errcode' not in jsonArr:
break
except aiohttp.ClientError:
# await response.release() # 异步释放资源
# break
pass
# time.sleep(2)
tries += 1
try:
# text = await response.text()#异步接收返回数据
print('------tries---------:%d' % tries)
print(jsonArr)
if 'errcode' in jsonArr:
self.AppLogging.warning("get user infois error:%s",
jsonArr['errcode'])
else:
# weixinOpenidList[openid] = jsonArr
self.doDBwork(openid, bid, jsonArr, unionArr, proveinList,
citiesList, self_db, logger)
finally:
await response.release() # 异步释放资源
async def work(self, bid, wxClass, unionArr, proveinList, citiesList,
self_db, logger):
try:
while True:
openid = await self.urls_queue.get() # 队列中取openid
await self.handle(openid, bid, wxClass, unionArr, proveinList,
citiesList, self_db, logger) # 子方法去取数据
time.sleep(sleep_interval) # 线程睡眠
self.urls_queue.task_done() # 没有任务后结束
except asyncio.CancelledError:
pass
async def run(self, bid, wxClass, unionArr, proveinList, citiesList,
self_db, logger):
# 开启多个工作携程来执行
workers = [
asyncio.Task(self.work(bid, wxClass, unionArr, proveinList,
citiesList, self_db, logger),
loop=self.loop) for _ in range(self.max_tasks)
]
self.started_at = datetime.now() # 程序开始时间
await self.urls_queue.join() # 连接join到队列中
self.end_at = datetime.now() # 结束时间
for w in workers:
w.cancel() # 释放携程
def doDBwork(self, wxOpenid, bid, tmplist, unionArr, proveinList,
citiesList, self_db, logger):
wx = online_userinfo_weixin
dbtype, vlist = self.dowork(tmplist, unionArr, proveinList, citiesList)
print('---------vvvvvvv----------', dbtype)
print(vlist)
if dbtype == 1: # 插入
dblist = {
'bid': bid,
'openid': vlist['openid'],
'unionid': vlist['unionid'],
'groupIds': vlist['groupIds'],
'sex': vlist['sex'],
'nickname': vlist['nickname'],
'remark': vlist['remark'],
'subscribe': vlist['subscribe'],
'subscribe_time': vlist['subscribe_time'],
'thumb': vlist['headimgurl'],
'pid': vlist['pid'],
'cid': vlist['cid'],
'uptime': vlist['uptime'],
'intime': vlist['intime'],
'indate': vlist['indate'],
}
if 'userId' in vlist:
dblist['userId'] = vlist['userId']
global insertCount
insertCount += 1
print(dblist)
# raise
try:
rr = self_db.execute(wx.__table__.insert(), dblist)
self_db.commit()
logger.info('bid=%s,insetr to db %s', bid, dblist)
except:
print('----db insert error-----')
elif dbtype == 2: # 更新
dblist = {
'unionid': vlist['unionid'],
'sex': vlist['sex'],
'nickname': vlist['nickname'],
'remark': vlist['remark'],
'subscribe': vlist['subscribe'],
'subscribe_time': vlist['subscribe_time'],
'thumb': vlist['headimgurl'],
'pid': vlist['pid'],
'cid': vlist['cid'],
'uptime': vlist['uptime'],
'groupIds': vlist['groupIds'],
}
if 'userId' in vlist:
dblist['userId'] = vlist['userId']
global updateCount
updateCount += 1
try:
updateUserId = bOpenidList[wxOpenid]
rr = self_db.query(wx).filter(wx.id == updateUserId).update(
dblist, synchronize_session=False)
self_db.commit()
logger.info('bid=%s,update to db %s', bid, dblist)
except:
print('-----db update error-------')
# global bOpenidList
bOpenidList.pop(wxOpenid)
# self_db.commit()
else:
pass
def dowork(self, tmplist, unionArr, proveinList, citiesList):
dbtype = 1 # 1插入2更新3取消关注
indate = int(
time.mktime(
time.strptime(time.strftime('%Y-%m-%d', time.localtime()),
'%Y-%m-%d')))
intime = int(time.time())
if not tmplist:
return None, None
if not isinstance(tmplist, (dict)):
return None, None
# subscribe
if not 'openid' in tmplist:
return None, None
openid = tmplist['openid']
tmplist['intime'] = intime
tmplist['uptime'] = intime
tmplist['indate'] = indate
# nickname
if 'nickname' not in tmplist:
tmplist['nickname'] = ''
else:
pass
# if isinstance(tmplist['nickname'],bytes):
# pass
# else:
# tmplist['nickname']=tmplist['nickname'].encode('unicode-escape')
# headimgurl
if 'headimgurl' not in tmplist:
tmplist['headimgurl'] = ''
# subscribe_time
if 'subscribe_time' not in tmplist:
tmplist['subscribe_time'] = 0
# remark
if 'remark' not in tmplist:
tmplist['remark'] = ''
# 省分id
if 'province' in tmplist:
tmplist['pid'] = self.defindName(tmplist['province'], proveinList)
else:
tmplist['pid'] = 0
# 查找市
if 'city' in tmplist:
tmplist['cid'] = self.defindName(tmplist['city'], citiesList)
else:
tmplist['cid'] = 0
# 性别
if 'sex' not in tmplist:
tmplist['sex'] = 0
# subscribe
if 'subscribe' not in tmplist:
tmplist['subscribe'] = 0
# userId
if 'unionid' in tmplist:
findunionid = tmplist['unionid']
if findunionid in unionArr:
userId = unionArr[findunionid]
if userId:
tmplist['userId'] = userId
else:
tmplist['unionid'] = ''
# 用户分组
if (tmplist['subscribe'] == 0): # 取消关注清空一些数据
tmplist['groupId0'] = 0
tmplist['groupId1'] = 0
tmplist['groupId2'] = 0
tmplist['groupIds'] = ''
tmplist['subscribe'] = 0
tmplist['subscribe_time'] = 0
dbtype = 3 # 取消关注
else:
h = ''
for ts in tmplist['tagid_list']:
# print(ts)
h += str(ts) + ','
tmplist['groupIds'] = h[:-1]
# 存在就更新
if openid in bOpenidList:
dbtype = 2
else:
dbtype = 1
return dbtype, tmplist
class Rx(PrettyPrintable):
def __init__(self,
rx_tree,
session_id,
header_table=None,
io_loop=None,
service_name=None,
raw_headers=None,
trace_id=None):
if header_table is None:
header_table = CocaineHeaders()
if io_loop:
warnings.warn('io_loop argument is deprecated.',
DeprecationWarning)
# If it's not the main thread
# and a current IOloop doesn't exist here,
# IOLoop.instance becomes self._io_loop
self._io_loop = io_loop or IOLoop.current()
self._queue = Queue()
self._done = False
self.session_id = session_id
self.service_name = service_name
self.rx_tree = rx_tree
self.default_protocol = detect_protocol_type(rx_tree)
self._headers = header_table
self._current_headers = self._headers.merge(raw_headers)
self.log = get_trace_adapter(log, trace_id)
@coroutine
def get(self, timeout=0, protocol=None):
if self._done and self._queue.empty():
raise ChokeEvent()
# to pull various service errors
if timeout <= 0:
item = yield self._queue.get()
else:
deadline = datetime.timedelta(seconds=timeout)
item = yield self._queue.get(deadline)
if isinstance(item, Exception):
raise item
if protocol is None:
protocol = self.default_protocol
name, payload, raw_headers = item
self._current_headers = self._headers.merge(raw_headers)
res = protocol(name, payload)
if isinstance(res, ProtocolError):
raise ServiceError(self.service_name, res.reason, res.code,
res.category)
else:
raise Return(res)
def done(self):
self._done = True
def push(self, msg_type, payload, raw_headers):
dispatch = self.rx_tree.get(msg_type)
self.log.debug("dispatch %s %.300s", dispatch, payload)
if dispatch is None:
raise InvalidMessageType(self.service_name,
CocaineErrno.INVALIDMESSAGETYPE,
"unexpected message type %s" % msg_type)
name, rx = dispatch
self.log.info("got message from `%s`: channel id: %s, type: %s",
self.service_name, self.session_id, name)
self._queue.put_nowait((name, payload, raw_headers))
if rx == {}: # the last transition
self.done()
elif rx is not None: # not a recursive transition
self.rx_tree = rx
def error(self, err):
self._queue.put_nowait(err)
def closed(self):
return self._done
def _format(self):
return "name: %s, queue: %s, done: %s" % (self.service_name,
self._queue, self._done)
@property
def headers(self):
return self._current_headers
class BatchedStream(object):
""" Mostly obsolete, see BatchedSend """
def __init__(self, stream, interval):
self.stream = stream
self.interval = interval / 1000.0
self.last_transmission = default_timer()
self.send_q = Queue()
self.recv_q = Queue()
self._background_send_coroutine = self._background_send()
self._background_recv_coroutine = self._background_recv()
self._broken = None
self.pc = PeriodicCallback(lambda: None, 100)
self.pc.start()
@gen.coroutine
def _background_send(self):
with log_errors():
while True:
msg = yield self.send_q.get()
if msg == "close":
break
msgs = [msg]
now = default_timer()
wait_time = self.last_transmission + self.interval - now
if wait_time > 0:
yield gen.sleep(wait_time)
while not self.send_q.empty():
msgs.append(self.send_q.get_nowait())
try:
yield write(self.stream, msgs)
except StreamClosedError:
self.recv_q.put_nowait("close")
self._broken = True
break
if len(msgs) > 1:
logger.debug("Batched messages: %d", len(msgs))
for _ in msgs:
self.send_q.task_done()
@gen.coroutine
def _background_recv(self):
with log_errors():
while True:
try:
msgs = yield read(self.stream)
except StreamClosedError:
self.recv_q.put_nowait("close")
self.send_q.put_nowait("close")
self._broken = True
break
assert isinstance(msgs, list)
if len(msgs) > 1:
logger.debug("Batched messages: %d", len(msgs))
for msg in msgs:
self.recv_q.put_nowait(msg)
@gen.coroutine
def flush(self):
yield self.send_q.join()
@gen.coroutine
def send(self, msg):
if self._broken:
raise StreamClosedError("Batch Stream is Closed")
else:
self.send_q.put_nowait(msg)
@gen.coroutine
def recv(self):
result = yield self.recv_q.get()
if result == "close":
raise StreamClosedError("Batched Stream is Closed")
else:
raise gen.Return(result)
@gen.coroutine
def close(self):
yield self.flush()
raise gen.Return(self.stream.close())
def closed(self):
return self.stream.closed()
class CommandTopic(object):
def __init__(self, topic_name, maxsize=10):
self.topic_name = topic_name
self.q_maxsize = maxsize
self.q = Queue(maxsize=maxsize)
self.sem = BoundedSemaphoreWithValue(1)
self.mid_gen = _MidGenerator()
self.gc_flag = False
self.io_loop = ioloop.IOLoop.current()
def issue(self, ft, cmd, block, timeout):
if 'mid' not in cmd:
cmd['mid'] = next(self.mid_gen)
try:
h_timeout = self.io_loop.call_later(timeout, self.cmd_timeout, ft, cmd)
ft.add_done_callback(lambda _: self.io_loop.remove_timeout(h_timeout))
# [ft, cmd, block]
self.q.put_nowait([ft, cmd, block])
except Exception as e:
ft.set_exception(e)
return ft
def cmd_timeout(self, ft, cmd):
ft.set_exception(gen.TimeoutError('Timeout in waiting response of command: {}'.format(str(cmd))))
@gen.coroutine
def start_cmd(self):
yield self.sem.acquire()
item = yield self.q.get()
if not item:
self.sem.release()
raise gen.Return(None)
self.queue_item_under_process = item
ft, cmd, block = item
# a special case should be handled:
# the network is very slow so the future timed out before semaphore acquirement is done
if ft.done():
raise gen.Return(None)
ft.add_done_callback(lambda _: self.sem.release())
if not block: # notification type cmd, dont wait response
ft.set_result(None)
raise gen.Return(cmd)
def finish_cmd(self, mid, resp):
ft, cmd, block = self.queue_item_under_process
if not ft.done() and mid == cmd['mid']:
ft.set_result(resp)
def start_listen(self):
if self.sem.value() == 0:
self.q.put(None)
self.gc_flag = False
def stop_listen(self):
if hasattr(self, 'pending_item'):
ft, cmd, block = self.queue_item_under_process
if not ft.done():
ft.set_result(None)
self.q.put(None)
self.gc_flag = True
def is_marked_gc(self):
return self.gc_flag