def test_TFBertForMaskedLM(self):
from transformers import BertConfig, TFBertForMaskedLM
keras.backend.clear_session()
# pretrained_weights = 'bert-base-uncased'
tokenizer_file = 'bert_bert-base-uncased.pickle'
tokenizer = self._get_tokenzier(tokenizer_file)
text, inputs, inputs_onnx = self._prepare_inputs(tokenizer)
config = BertConfig()
model = TFBertForMaskedLM(config)
predictions = model.predict(inputs)
onnx_model = keras2onnx.convert_keras(model, model.name)
self.assertTrue(
run_onnx_runtime(onnx_model.graph.name, onnx_model, inputs_onnx, predictions, self.model_files, rtol=1.e-2,
atol=1.e-4))
def __init__(self, index_type="mlm", model_path="bert-base-uncased", **kwargs):
Expander.__init__(self, index_type)
self.candidate_pos = ["NOUN", "ADJ", "ADV"]
self.model_path = model_path
allowed_keys = list(self.__dict__.keys())
self.__dict__.update((k, v)
for k, v in kwargs.items() if k in allowed_keys)
rejected_keys = set(kwargs.keys()) - set(allowed_keys)
if rejected_keys:
raise ValueError(
"Invalid arguments in ElasticSearchRetriever constructor:{}".format(rejected_keys))
logger.info(
">> loading HF model for Query Expansion from " + model_path)
self.tokenizer = AutoTokenizer.from_pretrained(
self.model_path, use_fast=True)
self.model = TFBertForMaskedLM.from_pretrained(
self.model_path, from_pt=True)
logger.info(">> Loading Spacy NLP model ")
try:
self.nlp = spacy.load('en_core_web_md')
except OSError:
logger.info(
"Downloading language model for the spaCy POS tagger (don't worry, this will only happen once)")
from spacy.cli import download
download('en_core_web_md')
self.nlp = spacy.load('en_core_web_md')
def _init_model(self):
"""
Initializes model.
"""
if self.model_dir:
logger.status_update("Loading BERT model at {}...".format(
self.model_dir))
self.model = TFBertForMaskedLM.from_pretrained(self.model_dir,
from_pt=True,
config=self.config)
elif self.model_name:
logger.status_update("Loading BERT model {}...".format(
self.model_name))
self.model = TFBertForMaskedLM.from_pretrained(self.model_name,
config=self.config)
return self.model
def main(raw_args=None):
parser = argparse.ArgumentParser()
parser.add_argument("--model_name",
type=str,
required=True,
help="model name e.g. xlnet-tiny-chinese")
parser.add_argument("--cache_dir",
type=str,
default=None,
required=False,
help="Directory containing pytorch model")
parser.add_argument("--pytorch_model_path",
type=str,
required=True,
help="/path/to/<pytorch-model-name>.bin")
parser.add_argument("--tf_cache_dir",
type=str,
required=True,
help="Directory in which to save tensorflow model")
args = parser.parse_args(raw_args)
# Load the PyTorch model in TensorFlow
tf_model = TFBertForMaskedLM.from_pretrained(args.cache_dir, from_pt=True)
# Save the TensorFlow model
tf_model.save_pretrained(args.tf_cache_dir)
def __init__(self):
self.use_cuda = torch.cuda.is_available()
self.device = torch.device("cuda" if self.use_cuda else "cpu")
self.bertmodel = 'bert-large-uncased'
self.tokenizer = BertTokenizer.from_pretrained(self.bertmodel)
self.model = TFBertForMaskedLM.from_pretrained(self.bertmodel).to(self.device)
self.model.eval()
def _build_masked_lm_from_huggingface(self):
from transformers import TFBertForMaskedLM
model = TFBertForMaskedLM.from_pretrained(
os.path.join(os.environ["PYTORCH_MODEL_PATH"], "bert_uncased_L-6_H-768_A-12-pytorch"),
from_pt=True,
)
return model
def test_TFBertForMaskedLM(self):
from transformers import BertTokenizer, TFBertForMaskedLM
pretrained_weights = 'bert-base-uncased'
tokenizer = BertTokenizer.from_pretrained(pretrained_weights)
text, inputs, inputs_onnx = self._prepare_inputs(tokenizer)
model = TFBertForMaskedLM.from_pretrained(pretrained_weights)
predictions = model.predict(inputs)
onnx_model = keras2onnx.convert_keras(model, model.name)
self.assertTrue(
run_onnx_runtime(onnx_model.graph.name,
onnx_model,
inputs_onnx,
predictions,
self.model_files,
rtol=1.e-2,
atol=1.e-4))
def language_decoder(args):
lang_model = TFBertForMaskedLM.from_pretrained(
args.model_name, cache_dir='/scratch/gpfs/zzada/cache-tf')
d_size = lang_model.config.hidden_size
v_size = lang_model.config.vocab_size
lang_decoder = lang_model.mlm
lang_decoder.trainable = False
inputs = Input((d_size, ))
x = Reshape((1, d_size))(inputs)
x = lang_decoder(x)
x = Reshape((v_size, ))(x)
# x = Lambda(lambda z: tf.gather(z, vocab_indices, axis=-1))(x)
x = Activation('softmax')(x)
lm_decoder = Model(inputs=inputs, outputs=x)
lm_decoder.summary()
return lm_decoder
def main(args):
root = os.environ.get('BASE_DIR')
tmp = root + "/models/tmp/" + args.model
savepath = root + "/models/" + args.model
for folder in [tmp, savepath]:
if not os.path.exists(folder):
os.makedirs(folder)
# download transformers model and save in tmp folder
model = BertForMaskedLM.from_pretrained(args.model)
model.save_pretrained(tmp)
# Load the PyTorch model in TensorFlow
tf_model = TFBertForMaskedLM.from_pretrained(tmp, from_pt=True)
# Save the TensorFlow model
tf.saved_model.save(tf_model, savepath)
# Download needed files
url = "https://s3.amazonaws.com/models.huggingface.co/bert/" + args.model + "/"
wget.download(url + 'config.json', savepath)
wget.download(url + 'vocab.txt', savepath)
#rename files
os.rename(savepath + "/config.json", savepath + "/bert_config.json")
os.rename(savepath + "/variables/variables.data-00000-of-00001",
savepath + "/bert_model.ckpt.data-00000-of-00001")
os.rename(savepath + "/variables/variables.index",
savepath + "/bert_model.ckpt.index")
#remove useless stuff
os.rmdir(savepath + "/assets")
os.rmdir(savepath + "/variables")
os.remove(savepath + "/saved_model.pb")
shutil.rmtree("./models/tmp")
def load_model(model_path):
return (
TFBertForMaskedLM.from_pretrained(model_path),
BertTokenizer.from_pretrained(model_path),
)
def get_custom_MLMmodel(num_tokens):
model = BertForMaskedLM.from_pretrained('bert-base-uncased')
model.resize_token_embeddings(num_tokens)
model.save_pretrained('tmp/CustomModel/')
return TFBertForMaskedLM.from_pretrained('tmp/CustomModel', from_pt=True)
def download_bert_model():
return TFBertForMaskedLM.from_pretrained("bert-base-cased")
if __name__ == '__main__':
model_path = "../tcdata/bert/"
tokenizer = BertTokenizer.from_pretrained("../tcdata/bert/vocab.txt")
model_config = BertConfig.from_pretrained("../tcdata/bert/config.json")
# model_config.output_attentions = False
# model_config.output_hidden_states = False
# model_config.use_cache = True
# #
# bert_model = TFBertModel.from_pretrained(pretrained_model_name_or_path=model_path, from_pt=False,
# config=model_config, cache_dir="../user_data/temp")
# model = TFBertForMaskedLM(config=model_config)
# model.bert = bert_model
# model.resize_token_embeddings(len(tokenizer))
model = TFBertForMaskedLM.from_pretrained(pretrained_model_name_or_path=model_path, from_pt=False,
config=model_config, cache_dir="../user_data/temp")
model.resize_token_embeddings(len(tokenizer))
#
# inputs = tokenizer("中国的首都是[MASK]", return_tensors="tf")
# inputs["labels"] = tokenizer("中国的首都是北京", return_tensors="tf")["input_ids"]
inputs = tokenizer.encode("中国的首都是[MASK]", return_tensors="tf")
# print(tokenizer.tokenize("中国的首都是[MASK]"))
outputs = model(inputs)
# print(outputs)
# exit(0)
o1 = tf.argmax(outputs.logits[0], axis=1)
print(o1)
print(tokenizer.decode(o1))
import tensorflow as tf
import numpy as np
import jsonpickle
from tensorflow.python.keras.layers import Softmax
from transformers import BertTokenizer, TFBertForMaskedLM
from src.spacy_utils import LANG_MODEL, PatternNotFoundException
from src.semantic_sequence import SemanticSequence, MASK
from src.qualia_structure import CreationStrategy, QualiaElement, DebugQualiaStructure, Role
from spacy.lang.en.stop_words import STOP_WORDS
NAME_OF_MODEL = 'bert-base-cased'
tokenizer = BertTokenizer.from_pretrained(NAME_OF_MODEL)
MODEL = TFBertForMaskedLM.from_pretrained(NAME_OF_MODEL, return_dict=True)
class NumpyFloatHandler(jsonpickle.handlers.BaseHandler):
'''
Handler to convert numpy floats to string. Otherwise would be printed
as None.
'''
def flatten(self, obj, data):
return str(obj)
jsonpickle.handlers.registry.register(np.float, NumpyFloatHandler)
jsonpickle.handlers.registry.register(np.float32, NumpyFloatHandler)
jsonpickle.handlers.registry.register(np.float64, NumpyFloatHandler)
┃ ┫ ┫ ┃ ┫ ┫
┗━┻━┛ ┗━┻━┛
"""
import tensorflow as tf
import numpy as np
for gpu in tf.config.experimental.list_physical_devices('GPU'):
tf.config.experimental.set_memory_growth(gpu, True)
from transformers import BertTokenizer, TFBertForMaskedLM
tokenizer = BertTokenizer.from_pretrained('bert-base-cased')
model = TFBertForMaskedLM.from_pretrained('bert-base-cased', return_dict=True)
inputs = tokenizer("The capital of France is [MASK].", return_tensors="tf")
outputs = model(inputs)
logits = outputs.logits
output = np.argmax(logits[0][6])
o1 = tokenizer.decode(int(output))
inputs = tokenizer("The capital of [MASK] is BeiJing.", return_tensors="tf")
outputs = model(inputs)
logits = outputs.logits
output = np.argmax(logits[0][4])
def sentence_generator():
model_path = "./data/bert-large-cased-whole-word-masking"
model = TFBertForMaskedLM.from_pretrained(model_path)
tokenizer = BertTokenizer.from_pretrained(model_path)
return RhymeGenerator(model, tokenizer)
import json
import tensorflow as tf
from transformers import TFBertForMaskedLM, BertTokenizer
from utils import tokenize_and_label, train_test_split
from sklearn.metrics import classification_report
lm_model = TFBertForMaskedLM.from_pretrained(
'../SavedModels/DiBERT') # For fine tuned bert
#lm_model = TFBertForMaskedLM.from_pretrained('bert-base-uncased') For pretrained bert
tokenizer = BertTokenizer.from_pretrained('bert-base-uncased')
tokenizer.add_tokens(["[STARTQ]", "[ENDQ]", "[URL]"])
lm_model.resize_token_embeddings(len(tokenizer))
class TaskModel(tf.keras.models.Model):
def __init__(self, trained_lm_model, num_classes=5):
super(TaskModel, self).__init__()
self.encoder = trained_lm_model.layers[0]
self.prediction = tf.keras.layers.Dense(num_classes,
activation='softmax')
def call(self, inputs):
encoded_seq, _ = self.encoder(inputs)
return self.prediction(encoded_seq)
task_model = TaskModel(lm_model)
optimizer = tf.keras.optimizers.Adam(lr=0.00001)
with open('../Data/annotated_threads.json', 'r') as f:
data = json.load(f)