def test_gc_bounds_error_rise(self):
more_bounds = [20, 30, 40]
seq = 'GCGCTATAGCGCTATA'
# вот так можно проверить, кинет ли ошибку, когда надо ее кидать
with self.assertRaises(ValueError):
trimmomatic_clone.gc_bounds(seq, more_bounds)
def test_gc_bounds_without_bounds(self):
zero_bounds = []
seq = 'GCGCTATAGCGCTATA'
self.assertTrue(trimmomatic_clone.gc_bounds(seq, zero_bounds))
def test_gc_bounds_two_bounds_with_bad_seq(self):
bounds = [30, 60]
seq = 'ATATATATATATAT'
self.assertFalse(trimmomatic_clone.gc_bounds(seq, bounds))
def test_gc_bounds_two_bounds_with_good_seq(self):
bounds = [30, 60]
seq = 'GCGCTATAGCGCTATA'
self.assertTrue(trimmomatic_clone.gc_bounds(seq, bounds))
def test_gc_bounds_one_bound_with_bad_seq(self):
bound = [30]
seq = 'ATATATATATATAT'
self.assertFalse(trimmomatic_clone.gc_bounds(seq, bound))
def test_gc_bounds_one_bound_with_good_seq(self):
bound = [30]
seq = 'GCGCTATAGCGCTATA'
self.assertTrue(trimmomatic_clone.gc_bounds(seq, bound))