def parameter_signatures(par, model, tspan):
"""
:param par: parameter file path or vector of parameters
:param model: PySB model
:param tspan: time span
:return: tropical signatures of input parameters
"""
try:
if os.path.isfile(par):
parames = hf.read_pars(par)
else:
parames = par
drivers = run_tropical(model, tspan, parameters=parames, sp_visualize=None)
return drivers
except:
print(par)
print("".join(traceback.format_exception(*sys.exc_info())))
raise Exception("".join(traceback.format_exception(*sys.exc_info())))
from mm_simple_model import model from tropicalize import run_tropical import numpy as np tspan = np.linspace(0, 5, 51) run_tropical(model, tspan, sp_visualize=[3, 5])