style_axes(ax[i], 'Humerothoracic Elevation (Deg)' if i == 2 else None,
'Axial Orientation (Deg)')
ax[i].xaxis.set_major_locator(ticker.MultipleLocator(base=20.0))
act_row = {'ca': 0, 'sa': 1, 'fe': 2}
for idx, (activity, activity_df) in enumerate(
db_elev.groupby('Activity', observed=True)):
cur_row = act_row[activity.lower()]
_, agg_lines, quat_mean_lines = \
summary_plotter(activity_df['traj_interp'], 'ht', 'ht_ea_up', 'up', 'common_ht_range_coarse',
'common_coarse_up', 'euler.ht_isb', 2, ax[cur_row], ind_plotter, 'black', 'red',
error_bars='std', alpha=0.5)
# remove the quaternion average line
quat_mean_lines[0].remove()
del quat_mean_lines[0]
make_interactive()
plt.tight_layout(pad=0.5, h_pad=1.5, w_pad=0.5)
fig.suptitle("HT yx'y'' Axial Orientation",
fontsize=12,
fontweight='bold',
y=0.99)
plt.subplots_adjust(top=0.93)
fig.legend([agg_lines[0]], ['Mean'],
ncol=1,
handlelength=1.00,
handletextpad=0.25,
columnspacing=0.5,
loc='upper right',
bbox_to_anchor=(1, 1))
# add axes titles
params.scap_lateral,
params.dtheta_fine,
params.dtheta_coarse, [params.min_elev, params.max_elev],
should_clean=False)
(db['up_min_ht'], db['up_max_ht'], db['down_min_ht'],
db['down_max_ht']) = zip(
*(db['up_down_analysis'].apply(extract_up_down_min_max)))
plot_utils.init_graphing(params.backend)
plot_dirs = [['ht', 'ht_isb', 'HT'], ['gh', 'gh_isb', 'GH'],
['st', 'st_isb', 'ST']]
for plot_dir in plot_dirs:
traj = db.loc['U35_002_SA_t01', plot_dir[0]]
traj_euler = getattr(traj, 'euler')
fig = plt.figure(figsize=(14, 7), tight_layout=True)
ax = fig.subplots(2, 3)
for i in range(3):
ax[0, i].plot(np.rad2deg(getattr(traj_euler, plot_dir[1])[:, i]))
ax[1, i].plot(traj.pos[:, i])
if i == 0:
plot_utils.style_axes(ax[0, i], None, 'Orientation (deg)')
plot_utils.style_axes(ax[1, i], 'Frame Index (Zero-Based)',
'Position (mm)')
else:
plot_utils.style_axes(ax[0, i], None, None)
plot_utils.style_axes(ax[1, i], 'Frame Index (Zero-Based)',
None)
fig.suptitle(plot_dir[2])
plot_utils.make_interactive()
plt.show()