def format_process(process, workflow, report_dir):
duration = ""
start = ""
end = ""
if process.start:
start = strftime("%a, %d %b %Y %H:%M:%S", localtime(process.start))
if process.end:
end = strftime("%a, %d %b %Y %H:%M:%S", localtime(process.end))
duration = nice_duration(process.end - process.start)
running = start and not end
return {
'id': process.id,
'processor': process.processor.name,
'start': start,
'end': end,
'duration': duration,
'log_stdout': path2url(process.log_stdout, report_dir),
'log_stdout_size': nice_file_size(process.log_stdout, running),
'log_stderr': path2url(process.log_stderr, report_dir),
'log_stderr_size': nice_file_size(process.log_stderr, running),
'outputs': (format_resource(resource, workflow) for resource in process.iter_outputs()),
'inputs': (format_resource(resource, workflow) for resource in process.iter_inputs()),
'code': process.code,
'success': process.success,
'error_message': process.error_message,
}
def print_lost_sec(inv_duration):
print("{} of processing will be lost".format(nice_duration(inv_duration)))
def test_nice_duration_ms(self):
""" A duration must be rounded to seconds"""
nice = nice_duration(73.3)
assert nice == "1min 13s", nice
def print_abort_on_threshold(inv_duration, threshold):
msg = "You were about to loose {} seconds of processing time (which exceeds the {} " \
"threshold). \nAborting... ".format(nice_duration(inv_duration), nice_duration(threshold))
print(msg)
def test_nice_size_hour(self):
""" A duration below the day should be expressed in hours and minutes"""
nice = nice_duration(10000)
assert nice == "2h 46min", nice
def test_nice_size_day(self):
""" A duration above the day should be expressed in days and hours"""
nice = nice_duration(1000000)
assert nice == "11d 13h", nice
def test_nice_duration_s(self):
""" A duration below the minute should be expressed in seconds"""
nice = nice_duration(12)
assert nice == "12s", nice
def test_nice_duration_min(self):
""" A duration below the hour should be expressed in minutes and seconds"""
nice = nice_duration(64)
assert nice == "1min 4s", nice
def print_abort_on_threshold(inv_duration, threshold):
msg = "You were about to loose {} seconds of processing time (which exceeds the {} " \
"threshold). \nAborting... ".format(nice_duration(inv_duration), nice_duration(threshold))
print(msg)
def print_lost_sec(inv_duration):
print("{} of processing will be lost".format(nice_duration(inv_duration)))
def test_nice_duration_ms(self):
""" A duration must be rounded to seconds"""
nice = nice_duration(73.3)
assert nice == "1min 13s", nice
def test_nice_size_day(self):
""" A duration above the day should be expressed in days and hours"""
nice = nice_duration(1000000)
assert nice == "11d 13h", nice
def test_nice_size_hour(self):
""" A duration below the day should be expressed in hours and minutes"""
nice = nice_duration(10000)
assert nice == "2h 46min", nice
def test_nice_duration_min(self):
""" A duration below the hour should be expressed in minutes and seconds"""
nice = nice_duration(64)
assert nice == "1min 4s", nice
def test_nice_duration_s(self):
""" A duration below the minute should be expressed in seconds"""
nice = nice_duration(12)
assert nice == "12s", nice