def insertUpdateCheck(self, fd, warning= ""):
self.dict['title'] = "%s GeneWiki Entry for %s" % (self.action.title(), self.symbol)
#mailsrch = re.compile('([\w\-][\w\-\.]*@[\w\-][\w\-\.]+[a-zA-Z]{1,4})([\s,;])*')
mailsrch = re.compile('([\w\-][\w\-\.]*)@([\w\-\.]+)\.([a-zA-Z]{1,4})([\s,;])*')
httpsrch = re.compile('((?:http|ftp|gopher|file)://(?:[^ \n\r<\)]+))([\s,;])*')
if not self.comment or not self.email:
heading = self.dict['title']
detail = ["Please don't leave text field or email field empty."]
self.error(heading=heading,detail=detail,error="Error")
return
if self.action == 'update' and not self.reason:
heading = self.dict['title']
detail = ["Please submit your reason for this modification."]
self.error(heading=heading,detail=detail,error="Error")
return
if len(self.comment) >500:
heading = self.dict['title']
detail = ["Your entry is more than 500 characters."]
self.error(heading=heading,detail=detail,error="Error")
return
if self.email and re.sub(mailsrch, "", self.email) != "":
heading = self.dict['title']
detail = ["The format of your email address is incorrect."]
self.error(heading=heading,detail=detail,error="Error")
return
if self.weburl == "http://":
self.weburl = ""
if self.weburl and re.sub(httpsrch, "", self.weburl) != "":
heading = self.dict['title']
detail = ["The format of web resource link is incorrect."]
self.error(heading=heading,detail=detail,error="Error")
return
if self.pubmedid:
try:
test = map(int, string.split(self.pubmedid))
except:
heading = self.dict['title']
detail = ["PubMed IDs can only be integers."]
self.error(heading=heading,detail=detail,error="Error")
return
form = HT.Form(cgi= os.path.join(webqtlConfig.CGIDIR, webqtlConfig.SCRIPTFILE), name='addgenerif',submit=HT.Input(type='hidden'))
recordInfoTable = HT.TableLite(border=0, cellspacing=1, cellpadding=5,align="center")
addButton = HT.Input(type='submit',name='submit', value='%s GeneWiki Entry' % self.action.title(),Class="button")
hddn = {'curStatus':'insertResult', 'FormID':'geneWiki', 'symbol':self.symbol,
'comment':self.comment, 'email':self.email, 'species':self.species,
'action':self.action, 'reason':self.reason}
if self.Id:
hddn['Id']=self.Id
formBody = HT.TableLite()
formBody.append(HT.TR(
HT.TD(HT.Strong("Species: ")),
HT.TD(width=10),
HT.TD(string.split(self.species, ":")[0])
))
if self.pubmedid:
try:
formBody.append(HT.TR(
HT.TD(HT.Strong("PubMed IDs: ")),
HT.TD(width=10),
HT.TD(self.pubmedid)
))
hddn['pubmedid'] = self.pubmedid
except:
pass
if self.weburl:
try:
formBody.append(HT.TR(
HT.TD(HT.Strong("Web URL: ")),
HT.TD(width=10),
HT.TD(HT.Href(text=self.weburl, url=self.weburl, Class='fwn'))
))
hddn['weburl'] = self.weburl
except:
pass
formBody.append(HT.TR(
HT.TD(HT.Strong("Gene Notes: ")),
HT.TD(width=10),
HT.TD(self.comment)
))
formBody.append(HT.TR(
HT.TD(HT.Strong("Email: ")),
HT.TD(width=10),
HT.TD(self.email)
))
if self.initial:
formBody.append(HT.TR(
HT.TD(HT.Strong("Initial: ")),
HT.TD(width=10),
HT.TD(self.initial)
))
hddn['initial'] = self.initial
if self.genecategory:
cTD = HT.TD()
if type(self.genecategory) == type(""):
self.genecategory = string.split(self.genecategory)
self.cursor.execute("Select Id, Name from GeneCategory where Id in (%s) order by Name " % string.join(self.genecategory, ', '))
results = self.cursor.fetchall()
for item in results:
cTD.append(item[1], HT.BR())
formBody.append(HT.TR(
HT.TD(HT.Strong("Category: ")),
HT.TD(width=10),
cTD
))
hddn['genecategory'] = string.join(self.genecategory, " ")
formBody.append(HT.TR(
HT.TD(
HT.BR(), HT.BR(),
HT.Div("For security reasons, enter the code (case insensitive) in the image below to finalize your submission"), HT.BR(),
addButton, HT.Input(type="password", size = 25, name="password"),
colspan=3)
))
code = webqtlUtil.genRandStr(length=5, chars="abcdefghkmnpqrstuvwxyzABCDEFGHJKMNPQRSTUVWXYZ23456789")
filename= webqtlUtil.genRandStr("Sec_")
hddn['filename'] = filename
securityCanvas = pid.PILCanvas(size=(300,100))
Plot.plotSecurity(securityCanvas, text=code)
os.system("touch %s_.%s" % (os.path.join(webqtlConfig.IMGDIR,filename), code))
securityCanvas.save(os.path.join(webqtlConfig.IMGDIR,filename), format='png')
formBody.append(HT.TR(
HT.TD(HT.Image("/image/"+filename+".png"), colspan=3)
))
hddn['filename'] = filename
TD_LR = HT.TD(valign="top", bgcolor="#eeeeee")
title = HT.Paragraph("%s GeneWiki Entry for %s" % (self.action.title(), self.symbol), Class="title")
form.append(HT.P(), HT.Blockquote(formBody))
for key in hddn.keys():
form.append(HT.Input(name=key, value=hddn[key], type='hidden'))
TD_LR.append(title, HT.Blockquote(warning, Id="red"), form)
self.dict['body'] = TD_LR
