def write_result(result,
threshold,
path=PROJECT_PATH / 'data/test_data/positive_result'):
with codecs.open(path, 'w', 'utf-8') as file:
for line in result:
sentence, predict_id = line[0], line[1]
to_write = sentence + '\t' + str(predict_id) + '\n'
file.write(to_write)
file.flush()
_info('The result has been saved to {}'.format(path))
def model_fn(features, labels, mode, params):
"""this is prototype syntax, all parameters are necessary."""
# obtain the data
_info('*** Features ***')
for name in sorted(features.keys()):
tf.logging.info(" name = %s, shape = %s" %
(name, features[name].shape))
input_ids = features['input_ids'] # [batch_size, seq_length]
input_mask = features['input_mask'] # [batch_size, seq_length]
# if mode != tf.estimator.ModeKeys.PREDICT:
# # segment_idx = features['segment_dis']
# masked_lm_positions = features['masked_lm_positions'] # [batch_size, seq_length], specify the answer
# masked_lm_ids = features['masked_lm_ids'] # [batch_size, answer_seq_length], specify the answer labels
# masked_lm_weights = features['masked_lm_weights'] # [batch_size, seq_length], [1, 1, 0], 0 refers to the mask
# # next_sentence_labels = features['next_sentence_labels']
# else:
masked_lm_positions = features['masked_lm_positions']
masked_lm_ids = features['masked_lm_ids']
masked_lm_weights = features['masked_lm_weights']
if bert_config.train_type == 'seq2seq':
_info('Training seq2seq task.')
elif bert_config.train_type == 'lm':
_info('Training language model task.')
# build model
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
model = BertModel(config=bert_config,
is_training=is_training,
input_ids=input_ids,
input_mask=input_mask)
# compute loss
loss, per_loss, log_probs, logits = get_masked_lm_output(
bert_config, model.get_sequence_output(), model.embedding_table,
model.projection_table, masked_lm_positions, masked_lm_ids,
masked_lm_weights, mode)
if mode == tf.estimator.ModeKeys.PREDICT:
masked_lm_predictions = tf.reshape(
tf.argmax(log_probs, axis=-1, output_type=tf.int32), [-1])
output_spec = tf.estimator.EstimatorSpec(
mode, predictions=masked_lm_predictions)
else:
if mode == tf.estimator.ModeKeys.TRAIN:
# restore from the checkpoint,
# tf.estimator automatically restore from the model typically,
# maybe here is for restore some pre-trained parameters
tvars = tf.trainable_variables()
initialized_variable_names = {}
if init_checkpoint:
(assignment_map, initialized_variable_names
) = get_assignment_map_from_checkpoint(
tvars, init_checkpoint)
tf.train.init_from_checkpoint(init_checkpoint,
assignment_map)
_info('*** Trainable Variables ***')
for var in tvars:
init_string = ''
if var.name in initialized_variable_names:
init_string = ', *INIT_FROM_CKPT*'
_info('name = {}, shape={}{}'.format(
var.name, var.shape, init_string))
train_op = optimization.create_optimizer(
loss, bert_config.learning_rate, num_train_steps,
bert_config.lr_limit)
# learning_rate = tf.train.polynomial_decay(bert_config.learning_rate,
# tf.train.get_or_create_global_step(),
# num_train_steps,
# end_learning_rate=0.0,
# power=1.0,
# cycle=False)
# optimizer = tf.train.GradientDescentOptimizer(learning_rate=learning_rate)
# gradients = tf.gradients(loss, tvars, colocate_gradients_with_ops=True)
# clipped_gradients, _ = tf.clip_by_global_norm(gradients, 5.0)
# train_op = optimizer.apply_gradients(zip(clipped_gradients, tvars), global_step=tf.train.get_global_step())
output_spec = tf.estimator.EstimatorSpec(mode,
loss=loss,
train_op=train_op)
elif mode == tf.estimator.ModeKeys.EVAL:
is_real_example = tf.ones(tf.shape(masked_lm_ids),
dtype=tf.float32)
def metric_fn(loss, label_ids, logits, is_real_example):
"""
Args:
loss: tf.float32.
label_ids: [b, s].
logits: [b, s, v].
"""
# [b * s, v]
logits = tf.reshape(logits, [-1, logits.shape[-1]])
# [b * s, 1]
predictions = tf.argmax(logits,
axis=-1,
output_type=tf.int32)
# [b * s]
label_ids = tf.reshape(label_ids, [-1])
accuracy = tf.metrics.accuracy(labels=label_ids,
predictions=predictions)
loss = tf.metrics.mean(values=loss)
return {'eval_accuracy': accuracy, 'eval_loss': loss}
eval_metrics = metric_fn(loss, masked_lm_ids, logits,
is_real_example)
output_spec = tf.estimator.EstimatorSpec(
mode=mode, loss=loss, eval_metric_ops=eval_metrics)
return output_spec
def model_fn(features, labels, mode, params):
_info('*** Features ***')
for name in sorted(features.keys()):
tf.logging.info(" name = %s, shape = %s" % (name, features[name].shape))
input_ids = features['input_ids'] # [batch_size, seq_length]
# build model
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
model = BertModelOfficial(
config=bert_config,
is_training=is_training,
input_ids=input_ids)
# [b, s, h]
sequence_output = model.get_pooled_output()
# sequence_output = tf.reshape(sequence_output,
# [-1, bert_config.max_length * bert_config.hidden_size])
_info(sequence_output.shape)
with tf.variable_scope('prediction'):
logits = tf.layers.dense(sequence_output,
bert_config.classes,
name='prediction',
kernel_initializer=_mh.create_initializer(0.2))
# logits = _mh.batch_norm(logits, is_training=is_training)
prob = tf.nn.softmax(logits, axis=-1) # [b, 2]
predict_ids = tf.argmax(prob, axis=-1) # [b, ]
if mode == tf.estimator.ModeKeys.PREDICT:
predictions = {'class': predict_ids}
# the default key in 'output', however, when customized, the keys are identical with the keys in dict.
output_spec = tf.estimator.EstimatorSpec(mode, predictions=predictions)
else:
if mode == tf.estimator.ModeKeys.TRAIN:
tvars = tf.trainable_variables()
initialized_variable_names = {}
if init_checkpoint:
(assignment_map, initialized_variable_names) = get_assignment_map_from_checkpoint(tvars, init_checkpoint)
tf.train.init_from_checkpoint(init_checkpoint, assignment_map)
_info('*** Trainable Variables ***')
for var in tvars:
init_string = ''
if var.name in initialized_variable_names:
init_string = ', *INIT_FROM_CKPT*'
_info('name = {}, shape={}{}'.format(var.name, var.shape, init_string))
batch_size = tf.cast(bert_config.batch_size, tf.float32)
labels = tf.reshape(labels, [-1])
# logits = tf.expand_dims(logits, axis=1)
seq_loss = tf.reduce_sum(
tf.nn.sparse_softmax_cross_entropy_with_logits(
labels=labels, logits=logits)) / batch_size
loss = seq_loss
"""
Tutorial on `polynomial_decay`:
The formula is as below:
global_step = min(global_step, decay_steps)
decayed_learning_rate = (learning_rate - end_learning_rate) * (1 - global_step / decay_steps) ^ (power) + end_learning_rate
global_step: each batch step.
decay_steps: the whole step, the lr will touch the end_learning_rate after the decay_steps.
TRAIN_STEPS: the number for repeating the whole dataset, so the decay_steps = len(dataset) / batch_size * TRAIN_STEPS.
"""
train_op, lr = optimization.create_optimizer(loss, bert_config.learning_rate, bert_config.num_train_steps * 100, bert_config.lr_limit)
"""
learning_rate = tf.train.polynomial_decay(config.learning_rate,
tf.train.get_or_create_global_step(),
_cg.TRIAN_STEPS,
end_learning_rate=0.0,
power=1.0,
cycle=False)
lr = tf.maximum(tf.constant(config.lr_limit), learning_rate)
optimizer = tf.train.AdamOptimizer(lr, name='optimizer')
tvars = tf.trainable_variables()
gradients = tf.gradients(loss, tvars, colocate_gradients_with_ops=config.colocate_gradients_with_ops)
clipped_gradients, _ = tf.clip_by_global_norm(gradients, 5.0)
train_op = optimizer.apply_gradients(zip(clipped_gradients, tvars), global_step=tf.train.get_global_step())
"""
# this is excellent, because it could display the result each step, i.e., each step equals to batch_size.
# the output_spec, display the result every save checkpoints step.
logging_hook = tf.train.LoggingTensorHook({'loss' : loss, 'lr': lr}, every_n_iter=10)
output_spec = tf.estimator.EstimatorSpec(mode, loss=loss, train_op=train_op, training_hooks=[logging_hook])
elif mode == tf.estimator.ModeKeys.EVAL:
# TODO
raise NotImplementedError
return output_spec
path=bert_config.data_path,
batch_size=bert_config.batch_size,
repeat_num=bert_config.num_train_steps,
max_length = bert_config.max_length)
gpu_config = tf.ConfigProto()
gpu_config.gpu_options.allow_growth=True
run_config = tf.contrib.tpu.RunConfig(
session_config=gpu_config,
keep_checkpoint_max=1,
save_checkpoints_steps=10,
model_dir=bert_config.model_dir)
estimaotr = tf.estimator.Estimator(model_fn, config=run_config)
estimaotr.train(input_fn) # train_input_fn should be callable
def package_model(ckpt_path, pb_path):
model_fn = model_fn_builder(bert_config, None, bert_config.learning_rate, bert_config.num_train_steps)
estimator = tf.estimator.Estimator(model_fn, ckpt_path)
estimator.export_saved_model(pb_path, server_input_receiver_fn)
if __name__ == '__main__':
if sys.argv[1] == 'train':
main()
elif sys.argv[1] == 'package':
package_model(str(PROJECT_PATH / 'models_lm'), str(PROJECT_PATH / 'models_deploy_lm'))
else:
_error('Unknown parameter: {}.'.format(sys.argv[1]))
_info('Choose from [train | package].')
def model_fn(features, labels, mode, params):
# obtain the data
_info('*** Features ***')
for name in sorted(features.keys()):
tf.logging.info(' name = %s, shape = %s' % (name, features[name].shape))
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
if is_training:
input_A = features['input_A']
input_B = features['input_B']
input_A_length = features['input_A_length']
input_B_length = features['input_B_length']
else:
input_A = features['input_A']
input_B = features['input_A']
input_A_length = features['input_A_length']
input_B_length = features['input_A_length']
# if mode != tf.estimator.ModeKeys.PREDICT:
# decoder_input_data = features['decoder_input_data']
# seq_length_decoder_input_data = features['seq_length_decoder_input_data']
# else:
# decoder_input_data = None
# seq_length_decoder_input_data = None
# build Encoder
model = ERCNNModel(config=config,
is_training=is_training,
sent_A=input_A,
sent_B=input_B,
sent_length_A=input_A_length,
sent_length_B=input_B_length)
output = model.get_output()
# [b, s]
batch_size = tf.cast(_mh.get_shape_list(output)[0], dtype=tf.float32)
# output = tf.reduce_sum(tf.multiply(output_A, output_B), axis=-1)
# output = tf.reshape(output, (batch_size, 1))
if mode == tf.estimator.ModeKeys.PREDICT:
predictions = {'output_vector': output}
# the default key in 'output', however, when customized, the keys are identical with the keys in dict.
output_spec = tf.estimator.EstimatorSpec(mode, predictions=predictions)
else:
if mode == tf.estimator.ModeKeys.TRAIN:
# labels = tf.cast(labels, tf.float32)
# loss = tf.losses.mean_squared_error(labels, output)
# loss = tf.losses.mean_squared_error(output_A, output_B)
loss = tf.reduce_sum(
tf.nn.sparse_softmax_cross_entropy_with_logits(
labels=labels, logits=output)) / batch_size
# # loss = vae_loss + seq_loss
# loss = seq_loss
"""
Tutorial on `polynomial_decay`:
The formula is as below:
global_step = min(global_step, decay_steps)
decayed_learning_rate = (learning_rate - end_learning_rate) * (1 - global_step / decay_steps) ^ (power) + end_learning_rate
global_step: each batch step.
decay_steps: the whole step, the lr will touch the end_learning_rate after the decay_steps.
TRAIN_STEPS: the number for repeating the whole dataset, so the decay_steps = len(dataset) / batch_size * TRAIN_STEPS.
"""
# train_op, lr = create_optimizer(loss, config.learning_rate, _cg.TRIAN_STEPS, config.lr_limit)
learning_rate = tf.train.polynomial_decay(config.learning_rate,
tf.train.get_or_create_global_step(),
_cg.TRIAN_STEPS,
end_learning_rate=0.0,
power=1.0,
cycle=False)
lr = tf.maximum(tf.constant(config.lr_limit), learning_rate)
optimizer = tf.train.AdamOptimizer(lr, name='optimizer')
tvars = tf.trainable_variables()
gradients = tf.gradients(loss, tvars, colocate_gradients_with_ops=config.colocate_gradients_with_ops)
clipped_gradients, _ = tf.clip_by_global_norm(gradients, 5.0)
train_op = optimizer.apply_gradients(zip(clipped_gradients, tvars), global_step=tf.train.get_global_step())
# this is excellent, because it could display the result each step, i.e., each step equals to batch_size.
# the output_spec, display the result every save checkpoints step.
logging_hook = tf.train.LoggingTensorHook({'loss' : loss, 'lr': lr}, every_n_iter=10)
output_spec = tf.estimator.EstimatorSpec(mode, loss=loss, train_op=train_op, training_hooks=[logging_hook])
elif mode == tf.estimator.ModeKeys.EVAL:
# TODO
raise NotImplementedError
return output_spec
def model_fn(features, labels, mode, params):
"""the above formal parameters are necessary."""
# display the features
_info('*** Features ***')
for name in sorted(features.keys()):
tf.logging.info(' name = %s, shape = %s' %
(name, features[name].shape))
# get the input feature
# TODO customized define
input_x = features['input_x']
# define the model
is_training = (mode == tf.estimator.ModeKeys.TRAIN)
model = Model(config=_cg, input_x=input_x)
output = model.get_result()
# TRAIN, EVAL, PREDICT
if mode == tf.estimator.ModeKeys.PREDICT:
# TODO customized define
predict_results = {'result_1': output}
output_spec = tf.estimator.EstimatorSpec(
mode, predictions=predict_results)
else:
if mode == tf.estimator.ModeKeys.TRAIN:
# TODO customized define
labels = tf.reshape(labels, [-1])
output = tf.reshape(output, [-1])
loss = tf.keras.losses.MSE(labels, output)
learning_rate = tf.train.polynomial_decay(
_cg.learning_rate,
tf.train.get_or_create_global_step(),
_cg.train_steps,
end_learning_rate=_cg.end_learning_rate,
power=1.0,
cycle=False)
optimizer = tf.train.AdamOptimizer(learning_rate,
name='optimizer')
tvars = tf.trainable_variables()
gradients = tf.gradients(loss,
tvars,
colocate_gradients_with_ops=_cg.
colocate_gradients_with_ops)
clipper_gradients, _ = tf.clip_by_global_norm(gradients, 2.0)
train_op = optimizer.apply_gradients(
zip(clipper_gradients, tvars),
global_step=tf.train.get_global_step())
logging_hook = tf.train.LoggingTensorHook(
{
'loss': loss,
'lr': learning_rate
},
every_n_iter=_cg.print_info_interval)
output_spec = tf.estimator.EstimatorSpec(
mode,
loss=loss,
train_op=train_op,
training_hooks=[logging_hook])
elif mode == tf.estimator.ModeKeys.EVAL:
# TODO
raise NotImplementedError
return output_spec
