def _get_ahringer_384_parent(child_stock):
"""
Get the 384-format LibraryStock corresponding to a 96-format child stock.
Assumes standard Ahringer naming conventions.
If the parent doesn't exist, creates it, assuming same parent
as the child.
"""
child_plate_parts = child_stock.plate.id.split('-')
parent_plate_name = child_plate_parts[0] + '-' + child_plate_parts[1]
parent_plate = get_library_plate(parent_plate_name)
child_well = child_stock.well
parent_well = get_384_parent_well(child_plate_parts[2], child_well)
parent_pk = generate_library_stock_name(parent_plate_name, parent_well)
try:
parent_stock = LibraryStock.objects.get(pk=parent_pk)
except ObjectDoesNotExist:
parent_stock = LibraryStock(
id=parent_pk,
plate=parent_plate,
well=parent_well,
parent_stock=None,
intended_clone=child_stock.intended_clone,
)
parent_stock.save()
return parent_stock
def _get_ahringer_384_parent(child_stock):
"""
Get the 384-format LibraryStock corresponding to a 96-format child stock.
Assumes standard Ahringer naming conventions.
If the parent doesn't exist, creates it, assuming same parent
as the child.
"""
child_plate_parts = child_stock.plate.id.split('-')
parent_plate_name = child_plate_parts[0] + '-' + child_plate_parts[1]
parent_plate = get_library_plate(parent_plate_name)
child_well = child_stock.well
parent_well = get_384_parent_well(child_plate_parts[2], child_well)
parent_pk = generate_library_stock_name(parent_plate_name, parent_well)
try:
parent_stock = LibraryStock.objects.get(pk=parent_pk)
except ObjectDoesNotExist:
parent_stock = LibraryStock(
id=parent_pk,
plate=parent_plate,
well=parent_well,
parent_stock=None,
intended_clone=child_stock.intended_clone,
)
parent_stock.save()
return parent_stock
def test_lower_right_corner(self):
self.assertEqual(get_384_parent_well('A1', 'H12'), 'O23')
self.assertEqual(get_384_parent_well('A2', 'H12'), 'O24')
self.assertEqual(get_384_parent_well('B1', 'H12'), 'P23')
self.assertEqual(get_384_parent_well('B2', 'H12'), 'P24')
def test_lower_left_corner(self):
self.assertEqual(get_384_parent_well('A1', 'H01'), 'O01')
self.assertEqual(get_384_parent_well('A2', 'H01'), 'O02')
self.assertEqual(get_384_parent_well('B1', 'H01'), 'P01')
self.assertEqual(get_384_parent_well('B2', 'H01'), 'P02')
def test_upper_right_corner(self):
self.assertEqual(get_384_parent_well('A1', 'A12'), 'A23')
self.assertEqual(get_384_parent_well('A2', 'A12'), 'A24')
self.assertEqual(get_384_parent_well('B1', 'A12'), 'B23')
self.assertEqual(get_384_parent_well('B2', 'A12'), 'B24')
def test_upper_left_corner(self):
self.assertEqual(get_384_parent_well('A1', 'A01'), 'A01')
self.assertEqual(get_384_parent_well('A2', 'A01'), 'A02')
self.assertEqual(get_384_parent_well('B1', 'A01'), 'B01')
self.assertEqual(get_384_parent_well('B2', 'A01'), 'B02')
def test_lower_right_corner(self):
self.assertEqual(get_384_parent_well('A1', 'H12'), 'O23')
self.assertEqual(get_384_parent_well('A2', 'H12'), 'O24')
self.assertEqual(get_384_parent_well('B1', 'H12'), 'P23')
self.assertEqual(get_384_parent_well('B2', 'H12'), 'P24')
def test_lower_left_corner(self):
self.assertEqual(get_384_parent_well('A1', 'H01'), 'O01')
self.assertEqual(get_384_parent_well('A2', 'H01'), 'O02')
self.assertEqual(get_384_parent_well('B1', 'H01'), 'P01')
self.assertEqual(get_384_parent_well('B2', 'H01'), 'P02')
def test_upper_right_corner(self):
self.assertEqual(get_384_parent_well('A1', 'A12'), 'A23')
self.assertEqual(get_384_parent_well('A2', 'A12'), 'A24')
self.assertEqual(get_384_parent_well('B1', 'A12'), 'B23')
self.assertEqual(get_384_parent_well('B2', 'A12'), 'B24')
def test_upper_left_corner(self):
self.assertEqual(get_384_parent_well('A1', 'A01'), 'A01')
self.assertEqual(get_384_parent_well('A2', 'A01'), 'A02')
self.assertEqual(get_384_parent_well('B1', 'A01'), 'B01')
self.assertEqual(get_384_parent_well('B2', 'A01'), 'B02')
