def main(argv):
del argv # unused arg
tf.random.set_seed(FLAGS.seed)
per_core_batch_size = FLAGS.per_core_batch_size // FLAGS.ensemble_size
batch_size = per_core_batch_size * FLAGS.num_cores
steps_per_epoch = APPROX_IMAGENET_TRAIN_IMAGES // batch_size
steps_per_eval = IMAGENET_VALIDATION_IMAGES // batch_size
logging.info('Saving checkpoints at %s', FLAGS.output_dir)
if FLAGS.use_gpu:
logging.info('Use GPU')
strategy = tf.distribute.MirroredStrategy()
else:
logging.info('Use TPU at %s',
FLAGS.tpu if FLAGS.tpu is not None else 'local')
resolver = tf.distribute.cluster_resolver.TPUClusterResolver(
tpu=FLAGS.tpu)
tf.config.experimental_connect_to_cluster(resolver)
tf.tpu.experimental.initialize_tpu_system(resolver)
strategy = tf.distribute.experimental.TPUStrategy(resolver)
imagenet_train = utils.ImageNetInput(is_training=True,
data_dir=FLAGS.data_dir,
batch_size=per_core_batch_size,
use_bfloat16=FLAGS.use_bfloat16)
imagenet_eval = utils.ImageNetInput(is_training=False,
data_dir=FLAGS.data_dir,
batch_size=per_core_batch_size,
use_bfloat16=FLAGS.use_bfloat16)
test_datasets = {
'clean':
strategy.experimental_distribute_datasets_from_function(
imagenet_eval.input_fn),
}
if FLAGS.corruptions_interval > 0:
corruption_types, max_intensity = utils.load_corrupted_test_info()
for name in corruption_types:
for intensity in range(1, max_intensity + 1):
dataset_name = '{0}_{1}'.format(name, intensity)
corrupt_input_fn = utils.corrupt_test_input_fn(
batch_size=per_core_batch_size,
corruption_name=name,
corruption_intensity=intensity,
use_bfloat16=FLAGS.use_bfloat16)
test_datasets[dataset_name] = (
strategy.experimental_distribute_datasets_from_function(
corrupt_input_fn))
train_dataset = strategy.experimental_distribute_datasets_from_function(
imagenet_train.input_fn)
if FLAGS.use_bfloat16:
policy = tf.keras.mixed_precision.experimental.Policy('mixed_bfloat16')
tf.keras.mixed_precision.experimental.set_policy(policy)
summary_writer = tf.summary.create_file_writer(
os.path.join(FLAGS.output_dir, 'summaries'))
with strategy.scope():
logging.info('Building Keras ResNet-50 model')
model = ub.models.resnet50_rank1(
input_shape=(224, 224, 3),
num_classes=NUM_CLASSES,
alpha_initializer=FLAGS.alpha_initializer,
gamma_initializer=FLAGS.gamma_initializer,
alpha_regularizer=FLAGS.alpha_regularizer,
gamma_regularizer=FLAGS.gamma_regularizer,
use_additive_perturbation=FLAGS.use_additive_perturbation,
ensemble_size=FLAGS.ensemble_size,
random_sign_init=FLAGS.random_sign_init,
dropout_rate=FLAGS.dropout_rate,
prior_stddev=FLAGS.prior_stddev,
use_tpu=not FLAGS.use_gpu,
use_ensemble_bn=FLAGS.use_ensemble_bn)
logging.info('Model input shape: %s', model.input_shape)
logging.info('Model output shape: %s', model.output_shape)
logging.info('Model number of weights: %s', model.count_params())
# Scale learning rate and decay epochs by vanilla settings.
base_lr = FLAGS.base_learning_rate * batch_size / 256
learning_rate = utils.LearningRateSchedule(steps_per_epoch, base_lr,
FLAGS.train_epochs,
_LR_SCHEDULE)
optimizer = tf.keras.optimizers.SGD(learning_rate=learning_rate,
momentum=0.9,
nesterov=True)
metrics = {
'train/negative_log_likelihood':
tf.keras.metrics.Mean(),
'train/kl':
tf.keras.metrics.Mean(),
'train/kl_scale':
tf.keras.metrics.Mean(),
'train/elbo':
tf.keras.metrics.Mean(),
'train/loss':
tf.keras.metrics.Mean(),
'train/accuracy':
tf.keras.metrics.SparseCategoricalAccuracy(),
'train/ece':
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins),
'test/negative_log_likelihood':
tf.keras.metrics.Mean(),
'test/kl':
tf.keras.metrics.Mean(),
'test/elbo':
tf.keras.metrics.Mean(),
'test/accuracy':
tf.keras.metrics.SparseCategoricalAccuracy(),
'test/ece':
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins),
'test/member_accuracy_mean':
(tf.keras.metrics.SparseCategoricalAccuracy()),
'test/member_ece_mean':
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins)
}
if FLAGS.corruptions_interval > 0:
corrupt_metrics = {}
for intensity in range(1, max_intensity + 1):
for corruption in corruption_types:
dataset_name = '{0}_{1}'.format(corruption, intensity)
corrupt_metrics['test/nll_{}'.format(dataset_name)] = (
tf.keras.metrics.Mean())
corrupt_metrics['test/kl_{}'.format(dataset_name)] = (
tf.keras.metrics.Mean())
corrupt_metrics['test/elbo_{}'.format(dataset_name)] = (
tf.keras.metrics.Mean())
corrupt_metrics['test/accuracy_{}'.format(
dataset_name)] = (
tf.keras.metrics.SparseCategoricalAccuracy())
corrupt_metrics['test/ece_{}'.format(dataset_name)] = (
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins))
test_diversity = {}
training_diversity = {}
if FLAGS.ensemble_size > 1:
for i in range(FLAGS.ensemble_size):
metrics['test/nll_member_{}'.format(
i)] = tf.keras.metrics.Mean()
metrics['test/accuracy_member_{}'.format(i)] = (
tf.keras.metrics.SparseCategoricalAccuracy())
test_diversity = {
'test/disagreement': tf.keras.metrics.Mean(),
'test/average_kl': tf.keras.metrics.Mean(),
'test/cosine_similarity': tf.keras.metrics.Mean(),
}
training_diversity = {
'train/disagreement': tf.keras.metrics.Mean(),
'train/average_kl': tf.keras.metrics.Mean(),
'train/cosine_similarity': tf.keras.metrics.Mean(),
}
logging.info('Finished building Keras ResNet-50 model')
checkpoint = tf.train.Checkpoint(model=model, optimizer=optimizer)
latest_checkpoint = tf.train.latest_checkpoint(FLAGS.output_dir)
initial_epoch = 0
if latest_checkpoint:
# checkpoint.restore must be within a strategy.scope() so that optimizer
# slot variables are mirrored.
checkpoint.restore(latest_checkpoint)
logging.info('Loaded checkpoint %s', latest_checkpoint)
initial_epoch = optimizer.iterations.numpy() // steps_per_epoch
def compute_l2_loss(model):
filtered_variables = []
for var in model.trainable_variables:
# Apply l2 on the BN parameters and bias terms. This
# excludes only fast weight approximate posterior/prior parameters,
# but pay caution to their naming scheme.
if ('kernel' in var.name or 'batch_norm' in var.name
or 'bias' in var.name):
filtered_variables.append(tf.reshape(var, (-1, )))
l2_loss = FLAGS.l2 * 2 * tf.nn.l2_loss(
tf.concat(filtered_variables, axis=0))
return l2_loss
@tf.function
def train_step(iterator):
"""Training StepFn."""
def step_fn(inputs):
"""Per-Replica StepFn."""
images, labels = inputs
if FLAGS.ensemble_size > 1:
images = tf.tile(images, [FLAGS.ensemble_size, 1, 1, 1])
labels = tf.tile(labels, [FLAGS.ensemble_size])
with tf.GradientTape() as tape:
logits = model(images, training=True)
if FLAGS.use_bfloat16:
logits = tf.cast(logits, tf.float32)
probs = tf.nn.softmax(logits)
if FLAGS.ensemble_size > 1:
per_probs = tf.reshape(
probs,
tf.concat([[FLAGS.ensemble_size, -1], probs.shape[1:]],
0))
diversity_results = um.average_pairwise_diversity(
per_probs, FLAGS.ensemble_size)
negative_log_likelihood = tf.reduce_mean(
tf.keras.losses.sparse_categorical_crossentropy(
labels, logits, from_logits=True))
l2_loss = compute_l2_loss(model)
kl = sum(model.losses) / APPROX_IMAGENET_TRAIN_IMAGES
kl_scale = tf.cast(optimizer.iterations + 1, kl.dtype)
kl_scale /= steps_per_epoch * FLAGS.kl_annealing_epochs
kl_scale = tf.minimum(1., kl_scale)
kl_loss = kl_scale * kl
# Scale the loss given the TPUStrategy will reduce sum all gradients.
loss = negative_log_likelihood + l2_loss + kl_loss
scaled_loss = loss / strategy.num_replicas_in_sync
elbo = -(negative_log_likelihood + l2_loss + kl)
grads = tape.gradient(scaled_loss, model.trainable_variables)
# Separate learning rate implementation.
if FLAGS.fast_weight_lr_multiplier != 1.0:
grads_and_vars = []
for grad, var in zip(grads, model.trainable_variables):
# Apply different learning rate on the fast weights. This excludes BN
# and slow weights, but pay caution to the naming scheme.
if ('batch_norm' not in var.name
and 'kernel' not in var.name):
grads_and_vars.append(
(grad * FLAGS.fast_weight_lr_multiplier, var))
else:
grads_and_vars.append((grad, var))
optimizer.apply_gradients(grads_and_vars)
else:
optimizer.apply_gradients(zip(grads,
model.trainable_variables))
metrics['train/negative_log_likelihood'].update_state(
negative_log_likelihood)
metrics['train/kl'].update_state(kl)
metrics['train/kl_scale'].update_state(kl_scale)
metrics['train/elbo'].update_state(elbo)
metrics['train/loss'].update_state(loss)
metrics['train/accuracy'].update_state(labels, logits)
metrics['train/ece'].update_state(labels, probs)
if FLAGS.ensemble_size > 1:
for k, v in diversity_results.items():
training_diversity['train/' + k].update_state(v)
strategy.run(step_fn, args=(next(iterator), ))
@tf.function
def test_step(iterator, dataset_name):
"""Evaluation StepFn."""
def step_fn(inputs):
"""Per-Replica StepFn."""
images, labels = inputs
if FLAGS.ensemble_size > 1:
images = tf.tile(images, [FLAGS.ensemble_size, 1, 1, 1])
logits = tf.reshape([
model(images, training=False)
for _ in range(FLAGS.num_eval_samples)
], [FLAGS.num_eval_samples, FLAGS.ensemble_size, -1, NUM_CLASSES])
if FLAGS.use_bfloat16:
logits = tf.cast(logits, tf.float32)
all_probs = tf.nn.softmax(logits)
probs = tf.math.reduce_mean(all_probs, axis=[0, 1]) # marginalize
# Negative log marginal likelihood computed in a numerically-stable way.
labels_broadcasted = tf.broadcast_to(
labels,
[FLAGS.num_eval_samples, FLAGS.ensemble_size, labels.shape[0]])
log_likelihoods = -tf.keras.losses.sparse_categorical_crossentropy(
labels_broadcasted, logits, from_logits=True)
negative_log_likelihood = tf.reduce_mean(
-tf.reduce_logsumexp(log_likelihoods, axis=[0, 1]) +
tf.math.log(float(FLAGS.num_eval_samples *
FLAGS.ensemble_size)))
l2_loss = compute_l2_loss(model)
kl = sum(model.losses) / IMAGENET_VALIDATION_IMAGES
elbo = -(negative_log_likelihood + l2_loss + kl)
if dataset_name == 'clean':
if FLAGS.ensemble_size > 1:
per_probs = tf.reduce_mean(all_probs,
axis=0) # marginalize samples
diversity_results = um.average_pairwise_diversity(
per_probs, FLAGS.ensemble_size)
for k, v in diversity_results.items():
test_diversity['test/' + k].update_state(v)
for i in range(FLAGS.ensemble_size):
member_probs = per_probs[i]
member_loss = tf.keras.losses.sparse_categorical_crossentropy(
labels, member_probs)
metrics['test/nll_member_{}'.format(i)].update_state(
member_loss)
metrics['test/accuracy_member_{}'.format(
i)].update_state(labels, member_probs)
metrics['test/member_accuracy_mean'].update_state(
labels, member_probs)
metrics['test/member_ece_mean'].update_state(
labels, member_probs)
metrics['test/negative_log_likelihood'].update_state(
negative_log_likelihood)
metrics['test/kl'].update_state(kl)
metrics['test/elbo'].update_state(elbo)
metrics['test/accuracy'].update_state(labels, probs)
metrics['test/ece'].update_state(labels, probs)
else:
corrupt_metrics['test/nll_{}'.format(
dataset_name)].update_state(negative_log_likelihood)
corrupt_metrics['test/kl_{}'.format(
dataset_name)].update_state(kl)
corrupt_metrics['test/elbo_{}'.format(
dataset_name)].update_state(elbo)
corrupt_metrics['test/accuracy_{}'.format(
dataset_name)].update_state(labels, probs)
corrupt_metrics['test/ece_{}'.format(
dataset_name)].update_state(labels, probs)
strategy.run(step_fn, args=(next(iterator), ))
train_iterator = iter(train_dataset)
start_time = time.time()
for epoch in range(initial_epoch, FLAGS.train_epochs):
logging.info('Starting to run epoch: %s', epoch)
for step in range(steps_per_epoch):
train_step(train_iterator)
current_step = epoch * steps_per_epoch + (step + 1)
max_steps = steps_per_epoch * FLAGS.train_epochs
time_elapsed = time.time() - start_time
steps_per_sec = float(current_step) / time_elapsed
eta_seconds = (max_steps - current_step) / steps_per_sec
message = ('{:.1%} completion: epoch {:d}/{:d}. {:.1f} steps/s. '
'ETA: {:.0f} min. Time elapsed: {:.0f} min'.format(
current_step / max_steps, epoch + 1,
FLAGS.train_epochs, steps_per_sec, eta_seconds / 60,
time_elapsed / 60))
if step % 20 == 0:
logging.info(message)
datasets_to_evaluate = {'clean': test_datasets['clean']}
if (FLAGS.corruptions_interval > 0
and (epoch + 1) % FLAGS.corruptions_interval == 0):
datasets_to_evaluate = test_datasets
for dataset_name, test_dataset in datasets_to_evaluate.items():
logging.info('Testing on dataset %s', dataset_name)
test_iterator = iter(test_dataset)
for step in range(steps_per_eval):
if step % 20 == 0:
logging.info('Starting to run eval step %s of epoch: %s',
step, epoch)
test_step(test_iterator, dataset_name)
logging.info('Done with testing on %s', dataset_name)
corrupt_results = {}
if (FLAGS.corruptions_interval > 0
and (epoch + 1) % FLAGS.corruptions_interval == 0):
corrupt_results = utils.aggregate_corrupt_metrics(
corrupt_metrics, corruption_types, max_intensity,
FLAGS.alexnet_errors_path)
logging.info('Train Loss: %.4f, Accuracy: %.2f%%',
metrics['train/loss'].result(),
metrics['train/accuracy'].result() * 100)
logging.info('Test NLL: %.4f, Accuracy: %.2f%%',
metrics['test/negative_log_likelihood'].result(),
metrics['test/accuracy'].result() * 100)
for i in range(FLAGS.ensemble_size):
logging.info(
'Member %d Test Loss: %.4f, Accuracy: %.2f%%', i,
metrics['test/nll_member_{}'.format(i)].result(),
metrics['test/accuracy_member_{}'.format(i)].result() * 100)
total_metrics = metrics.copy()
total_metrics.update(training_diversity)
total_metrics.update(test_diversity)
total_results = {
name: metric.result()
for name, metric in total_metrics.items()
}
total_results.update(corrupt_results)
with summary_writer.as_default():
for name, result in total_results.items():
tf.summary.scalar(name, result, step=epoch + 1)
for metric in total_metrics.values():
metric.reset_states()
if (FLAGS.checkpoint_interval > 0
and (epoch + 1) % FLAGS.checkpoint_interval == 0):
checkpoint_name = checkpoint.save(
os.path.join(FLAGS.output_dir, 'checkpoint'))
logging.info('Saved checkpoint to %s', checkpoint_name)
final_checkpoint_name = checkpoint.save(
os.path.join(FLAGS.output_dir, 'checkpoint'))
logging.info('Saved last checkpoint to %s', final_checkpoint_name)
def main(argv):
del argv # unused arg
tf.io.gfile.makedirs(FLAGS.output_dir)
logging.info('Saving checkpoints at %s', FLAGS.output_dir)
tf.random.set_seed(FLAGS.seed)
batch_size = FLAGS.per_core_batch_size * FLAGS.num_cores
steps_per_epoch = APPROX_IMAGENET_TRAIN_IMAGES // batch_size
steps_per_eval = IMAGENET_VALIDATION_IMAGES // batch_size
if FLAGS.use_gpu:
logging.info('Use GPU')
strategy = tf.distribute.MirroredStrategy()
else:
logging.info('Use TPU at %s',
FLAGS.tpu if FLAGS.tpu is not None else 'local')
resolver = tf.distribute.cluster_resolver.TPUClusterResolver(
tpu=FLAGS.tpu)
tf.config.experimental_connect_to_cluster(resolver)
tf.tpu.experimental.initialize_tpu_system(resolver)
strategy = tf.distribute.experimental.TPUStrategy(resolver)
imagenet_train = utils.ImageNetInput(is_training=True,
data_dir=FLAGS.data_dir,
batch_size=FLAGS.per_core_batch_size,
use_bfloat16=FLAGS.use_bfloat16)
imagenet_eval = utils.ImageNetInput(is_training=False,
data_dir=FLAGS.data_dir,
batch_size=FLAGS.per_core_batch_size,
use_bfloat16=FLAGS.use_bfloat16)
test_datasets = {
'clean':
strategy.experimental_distribute_datasets_from_function(
imagenet_eval.input_fn)
}
if FLAGS.corruptions_interval > 0:
corruption_types, max_intensity = utils.load_corrupted_test_info()
for name in corruption_types:
for intensity in range(1, max_intensity + 1):
dataset_name = '{0}_{1}'.format(name, intensity)
corrupt_input_fn = utils.corrupt_test_input_fn(
batch_size=FLAGS.per_core_batch_size,
corruption_name=name,
corruption_intensity=intensity,
use_bfloat16=FLAGS.use_bfloat16)
test_datasets[dataset_name] = (
strategy.experimental_distribute_datasets_from_function(
corrupt_input_fn))
train_dataset = strategy.experimental_distribute_datasets_from_function(
imagenet_train.input_fn)
if FLAGS.use_bfloat16:
policy = tf.keras.mixed_precision.experimental.Policy('mixed_bfloat16')
tf.keras.mixed_precision.experimental.set_policy(policy)
with strategy.scope():
logging.info('Building Keras ResNet-50 model')
model = ub.models.resnet50_sngp(
input_shape=(224, 224, 3),
batch_size=None,
num_classes=NUM_CLASSES,
use_mc_dropout=FLAGS.use_mc_dropout,
dropout_rate=FLAGS.dropout_rate,
filterwise_dropout=FLAGS.filterwise_dropout,
use_gp_layer=FLAGS.use_gp_layer,
gp_hidden_dim=FLAGS.gp_hidden_dim,
gp_scale=FLAGS.gp_scale,
gp_bias=FLAGS.gp_bias,
gp_input_normalization=FLAGS.gp_input_normalization,
gp_cov_discount_factor=FLAGS.gp_cov_discount_factor,
gp_cov_ridge_penalty=FLAGS.gp_cov_ridge_penalty,
gp_output_imagenet_initializer=FLAGS.
gp_output_imagenet_initializer,
use_spec_norm=FLAGS.use_spec_norm,
spec_norm_iteration=FLAGS.spec_norm_iteration,
spec_norm_bound=FLAGS.spec_norm_bound)
logging.info('Model input shape: %s', model.input_shape)
logging.info('Model output shape: %s', model.output_shape)
logging.info('Model number of weights: %s', model.count_params())
# Scale learning rate and decay epochs by vanilla settings.
base_lr = FLAGS.base_learning_rate * batch_size / 256
learning_rate = utils.LearningRateSchedule(steps_per_epoch, base_lr,
FLAGS.train_epochs,
_LR_SCHEDULE)
optimizer = tf.keras.optimizers.SGD(learning_rate=learning_rate,
momentum=0.9,
nesterov=True)
metrics = {
'train/negative_log_likelihood': tf.keras.metrics.Mean(),
'train/accuracy': tf.keras.metrics.SparseCategoricalAccuracy(),
'train/loss': tf.keras.metrics.Mean(),
'train/ece': um.ExpectedCalibrationError(num_bins=FLAGS.num_bins),
'test/negative_log_likelihood': tf.keras.metrics.Mean(),
'test/accuracy': tf.keras.metrics.SparseCategoricalAccuracy(),
'test/ece': um.ExpectedCalibrationError(num_bins=FLAGS.num_bins),
'test/stddev': tf.keras.metrics.Mean(),
}
if FLAGS.corruptions_interval > 0:
corrupt_metrics = {}
for intensity in range(1, max_intensity + 1):
for corruption in corruption_types:
dataset_name = '{0}_{1}'.format(corruption, intensity)
corrupt_metrics['test/nll_{}'.format(dataset_name)] = (
tf.keras.metrics.Mean())
corrupt_metrics['test/accuracy_{}'.format(
dataset_name)] = (
tf.keras.metrics.SparseCategoricalAccuracy())
corrupt_metrics['test/ece_{}'.format(dataset_name)] = (
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins))
corrupt_metrics['test/stddev_{}'.format(dataset_name)] = (
tf.keras.metrics.Mean())
logging.info('Finished building Keras ResNet-50 model')
checkpoint = tf.train.Checkpoint(model=model, optimizer=optimizer)
latest_checkpoint = tf.train.latest_checkpoint(FLAGS.output_dir)
initial_epoch = 0
if latest_checkpoint:
# checkpoint.restore must be within a strategy.scope() so that optimizer
# slot variables are mirrored.
checkpoint.restore(latest_checkpoint)
logging.info('Loaded checkpoint %s', latest_checkpoint)
initial_epoch = optimizer.iterations.numpy() // steps_per_epoch
summary_writer = tf.summary.create_file_writer(
os.path.join(FLAGS.output_dir, 'summaries'))
@tf.function
def train_step(iterator):
"""Training StepFn."""
def step_fn(inputs):
"""Per-Replica StepFn."""
images, labels = inputs
with tf.GradientTape() as tape:
logits = model(images, training=True)
if isinstance(logits, tuple):
# If model returns a tuple of (logits, covmat), extract logits
logits, _ = logits
if FLAGS.use_bfloat16:
logits = tf.cast(logits, tf.float32)
negative_log_likelihood = tf.reduce_mean(
tf.keras.losses.sparse_categorical_crossentropy(
labels, logits, from_logits=True))
filtered_variables = []
for var in model.trainable_variables:
# Apply l2 on the weights. This excludes BN parameters and biases, but
# pay caution to their naming scheme.
if 'kernel' in var.name or 'bias' in var.name:
filtered_variables.append(tf.reshape(var, (-1, )))
l2_loss = FLAGS.l2 * 2 * tf.nn.l2_loss(
tf.concat(filtered_variables, axis=0))
# Scale the loss given the TPUStrategy will reduce sum all gradients.
loss = negative_log_likelihood + l2_loss
scaled_loss = loss / strategy.num_replicas_in_sync
grads = tape.gradient(scaled_loss, model.trainable_variables)
optimizer.apply_gradients(zip(grads, model.trainable_variables))
probs = tf.nn.softmax(logits)
metrics['train/ece'].update_state(labels, probs)
metrics['train/loss'].update_state(loss)
metrics['train/negative_log_likelihood'].update_state(
negative_log_likelihood)
metrics['train/accuracy'].update_state(labels, logits)
strategy.run(step_fn, args=(next(iterator), ))
@tf.function
def test_step(iterator, dataset_name):
"""Evaluation StepFn."""
def step_fn(inputs):
"""Per-Replica StepFn."""
images, labels = inputs
logits_list = []
stddev_list = []
for _ in range(FLAGS.num_dropout_samples):
logits = model(images, training=False)
if isinstance(logits, tuple):
# If model returns a tuple of (logits, covmat), extract both
logits, covmat = logits
else:
covmat = tf.eye(FLAGS.per_core_batch_size)
if FLAGS.use_bfloat16:
logits = tf.cast(logits, tf.float32)
logits = ed.layers.utils.mean_field_logits(
logits,
covmat,
mean_field_factor=FLAGS.gp_mean_field_factor)
stddev = tf.sqrt(tf.linalg.diag_part(covmat))
stddev_list.append(stddev)
logits_list.append(logits)
# Logits dimension is (num_samples, batch_size, num_classes).
logits_list = tf.stack(logits_list, axis=0)
stddev_list = tf.stack(stddev_list, axis=0)
stddev = tf.reduce_mean(stddev_list, axis=0)
probs_list = tf.nn.softmax(logits_list)
probs = tf.reduce_mean(probs_list, axis=0)
labels_broadcasted = tf.broadcast_to(
labels, [FLAGS.num_dropout_samples, labels.shape[0]])
log_likelihoods = -tf.keras.losses.sparse_categorical_crossentropy(
labels_broadcasted, logits_list, from_logits=True)
negative_log_likelihood = tf.reduce_mean(
-tf.reduce_logsumexp(log_likelihoods, axis=[0]) +
tf.math.log(float(FLAGS.num_dropout_samples)))
if dataset_name == 'clean':
metrics['test/negative_log_likelihood'].update_state(
negative_log_likelihood)
metrics['test/accuracy'].update_state(labels, probs)
metrics['test/ece'].update_state(labels, probs)
metrics['test/stddev'].update_state(stddev)
else:
corrupt_metrics['test/nll_{}'.format(
dataset_name)].update_state(negative_log_likelihood)
corrupt_metrics['test/accuracy_{}'.format(
dataset_name)].update_state(labels, probs)
corrupt_metrics['test/ece_{}'.format(
dataset_name)].update_state(labels, probs)
corrupt_metrics['test/stddev_{}'.format(
dataset_name)].update_state(stddev)
strategy.run(step_fn, args=(next(iterator), ))
metrics.update({'test/ms_per_example': tf.keras.metrics.Mean()})
train_iterator = iter(train_dataset)
start_time = time.time()
for epoch in range(initial_epoch, FLAGS.train_epochs):
logging.info('Starting to run epoch: %s', epoch)
for step in range(steps_per_epoch):
train_step(train_iterator)
current_step = epoch * steps_per_epoch + (step + 1)
max_steps = steps_per_epoch * FLAGS.train_epochs
time_elapsed = time.time() - start_time
steps_per_sec = float(current_step) / time_elapsed
eta_seconds = (max_steps - current_step) / steps_per_sec
message = ('{:.1%} completion: epoch {:d}/{:d}. {:.1f} steps/s. '
'ETA: {:.0f} min. Time elapsed: {:.0f} min'.format(
current_step / max_steps, epoch + 1,
FLAGS.train_epochs, steps_per_sec, eta_seconds / 60,
time_elapsed / 60))
if step % 20 == 0:
logging.info(message)
datasets_to_evaluate = {'clean': test_datasets['clean']}
if (FLAGS.corruptions_interval > 0
and (epoch + 1) % FLAGS.corruptions_interval == 0):
datasets_to_evaluate = test_datasets
for dataset_name, test_dataset in datasets_to_evaluate.items():
test_iterator = iter(test_dataset)
logging.info('Testing on dataset %s', dataset_name)
for step in range(steps_per_eval):
if step % 20 == 0:
logging.info('Starting to run eval step %s of epoch: %s',
step, epoch)
test_start_time = time.time()
test_step(test_iterator, dataset_name)
ms_per_example = (time.time() -
test_start_time) * 1e6 / batch_size
metrics['test/ms_per_example'].update_state(ms_per_example)
logging.info('Done with testing on %s', dataset_name)
corrupt_results = {}
if (FLAGS.corruptions_interval > 0
and (epoch + 1) % FLAGS.corruptions_interval == 0):
corrupt_results = utils.aggregate_corrupt_metrics(
corrupt_metrics, corruption_types, max_intensity,
FLAGS.alexnet_errors_path)
logging.info('Train Loss: %.4f, Accuracy: %.2f%%',
metrics['train/loss'].result(),
metrics['train/accuracy'].result() * 100)
logging.info('Test NLL: %.4f, Accuracy: %.2f%%',
metrics['test/negative_log_likelihood'].result(),
metrics['test/accuracy'].result() * 100)
total_results = {
name: metric.result()
for name, metric in metrics.items()
}
total_results.update(corrupt_results)
with summary_writer.as_default():
for name, result in total_results.items():
tf.summary.scalar(name, result, step=epoch + 1)
for metric in metrics.values():
metric.reset_states()
if (FLAGS.checkpoint_interval > 0
and (epoch + 1) % FLAGS.checkpoint_interval == 0):
checkpoint_name = checkpoint.save(
os.path.join(FLAGS.output_dir, 'checkpoint'))
logging.info('Saved checkpoint to %s', checkpoint_name)
# Save final checkpoint.
final_checkpoint_name = checkpoint.save(
os.path.join(FLAGS.output_dir, 'checkpoint'))
logging.info('Saved last checkpoint to %s', final_checkpoint_name)
# Export final model as SavedModel.
final_save_name = os.path.join(FLAGS.output_dir, 'model')
model.save(final_save_name)
logging.info('Saved model to %s', final_save_name)
def main(argv):
del argv # unused arg
tf.io.gfile.makedirs(FLAGS.output_dir)
logging.info('Saving checkpoints at %s', FLAGS.output_dir)
tf.random.set_seed(FLAGS.seed)
per_core_batch_size = FLAGS.per_core_batch_size // FLAGS.ensemble_size
batch_size = per_core_batch_size * FLAGS.num_cores
steps_per_epoch = APPROX_IMAGENET_TRAIN_IMAGES // batch_size
steps_per_eval = IMAGENET_VALIDATION_IMAGES // batch_size
if FLAGS.use_gpu:
logging.info('Use GPU')
strategy = tf.distribute.MirroredStrategy()
else:
logging.info('Use TPU at %s',
FLAGS.tpu if FLAGS.tpu is not None else 'local')
resolver = tf.distribute.cluster_resolver.TPUClusterResolver(
tpu=FLAGS.tpu)
tf.config.experimental_connect_to_cluster(resolver)
tf.tpu.experimental.initialize_tpu_system(resolver)
strategy = tf.distribute.TPUStrategy(resolver)
mixup_params = {
'ensemble_size': FLAGS.ensemble_size,
'mixup_alpha': FLAGS.mixup_alpha,
'adaptive_mixup': FLAGS.adaptive_mixup,
'num_classes': NUM_CLASSES,
}
imagenet_train = utils.ImageNetInput(is_training=True,
data_dir=FLAGS.data_dir,
batch_size=per_core_batch_size,
one_hot=(FLAGS.mixup_alpha > 0),
use_bfloat16=FLAGS.use_bfloat16,
mixup_params=mixup_params,
ensemble_size=FLAGS.ensemble_size)
imagenet_eval = utils.ImageNetInput(is_training=False,
data_dir=FLAGS.data_dir,
batch_size=per_core_batch_size,
use_bfloat16=FLAGS.use_bfloat16)
test_datasets = {
'clean':
strategy.experimental_distribute_datasets_from_function(
imagenet_eval.input_fn),
}
if FLAGS.adaptive_mixup:
imagenet_confidence_eval = utils.ImageNetInput(
is_training=True,
data_dir=FLAGS.data_dir,
batch_size=per_core_batch_size * FLAGS.ensemble_size,
use_bfloat16=FLAGS.use_bfloat16,
validation=True)
imagenet_confidence_dataset = (
strategy.experimental_distribute_datasets_from_function(
imagenet_confidence_eval.input_fn))
if FLAGS.corruptions_interval > 0:
corruption_types, max_intensity = utils.load_corrupted_test_info()
for name in corruption_types:
for intensity in range(1, max_intensity + 1):
dataset_name = '{0}_{1}'.format(name, intensity)
corrupt_input_fn = utils.corrupt_test_input_fn(
batch_size=per_core_batch_size,
corruption_name=name,
corruption_intensity=intensity,
use_bfloat16=FLAGS.use_bfloat16)
test_datasets[dataset_name] = (
strategy.experimental_distribute_datasets_from_function(
corrupt_input_fn))
train_dataset = strategy.experimental_distribute_datasets_from_function(
imagenet_train.input_fn)
if FLAGS.use_bfloat16:
policy = tf.keras.mixed_precision.experimental.Policy('mixed_bfloat16')
tf.keras.mixed_precision.experimental.set_policy(policy)
summary_writer = tf.summary.create_file_writer(
os.path.join(FLAGS.output_dir, 'summaries'))
with strategy.scope():
logging.info('Building Keras ResNet-50 model')
model = ub.models.resnet_batchensemble(
input_shape=(224, 224, 3),
num_classes=NUM_CLASSES,
ensemble_size=FLAGS.ensemble_size,
random_sign_init=FLAGS.random_sign_init,
use_ensemble_bn=FLAGS.use_ensemble_bn,
depth=FLAGS.depth)
logging.info('Model input shape: %s', model.input_shape)
logging.info('Model output shape: %s', model.output_shape)
logging.info('Model number of weights: %s', model.count_params())
# Scale learning rate and decay epochs by vanilla settings.
base_lr = FLAGS.base_learning_rate * batch_size / 256
learning_rate = utils.LearningRateSchedule(steps_per_epoch, base_lr,
FLAGS.train_epochs,
_LR_SCHEDULE)
optimizer = tf.keras.optimizers.SGD(learning_rate=learning_rate,
momentum=0.9,
nesterov=True)
metrics = {
'train/negative_log_likelihood':
tf.keras.metrics.Mean(),
'train/accuracy':
tf.keras.metrics.SparseCategoricalAccuracy(),
'train/loss':
tf.keras.metrics.Mean(),
'train/ece':
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins),
'test/negative_log_likelihood':
tf.keras.metrics.Mean(),
'test/accuracy':
tf.keras.metrics.SparseCategoricalAccuracy(),
'test/ece':
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins),
'test/member_accuracy_mean':
(tf.keras.metrics.SparseCategoricalAccuracy()),
'test/member_ece_mean':
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins)
}
if FLAGS.corruptions_interval > 0:
corrupt_metrics = {}
for intensity in range(1, max_intensity + 1):
for corruption in corruption_types:
dataset_name = '{0}_{1}'.format(corruption, intensity)
corrupt_metrics['test/nll_{}'.format(dataset_name)] = (
tf.keras.metrics.Mean())
corrupt_metrics['test/accuracy_{}'.format(
dataset_name)] = (
tf.keras.metrics.SparseCategoricalAccuracy())
corrupt_metrics['test/ece_{}'.format(dataset_name)] = (
um.ExpectedCalibrationError(num_bins=FLAGS.num_bins))
corrupt_metrics['test/member_acc_mean_{}'.format(
dataset_name)] = (
tf.keras.metrics.SparseCategoricalAccuracy())
corrupt_metrics['test/member_ece_mean_{}'.format(
dataset_name)] = (um.ExpectedCalibrationError(
num_bins=FLAGS.num_bins))
test_diversity = {}
training_diversity = {}
for i in range(FLAGS.ensemble_size):
metrics['test/nll_member_{}'.format(i)] = tf.keras.metrics.Mean()
metrics['test/accuracy_member_{}'.format(i)] = (
tf.keras.metrics.SparseCategoricalAccuracy())
test_diversity = {
'test/disagreement': tf.keras.metrics.Mean(),
'test/average_kl': tf.keras.metrics.Mean(),
'test/cosine_similarity': tf.keras.metrics.Mean(),
}
training_diversity = {
'train/disagreement': tf.keras.metrics.Mean(),
'train/average_kl': tf.keras.metrics.Mean(),
'train/cosine_similarity': tf.keras.metrics.Mean(),
}
logging.info('Finished building Keras ResNet-50 model')
checkpoint = tf.train.Checkpoint(model=model, optimizer=optimizer)
latest_checkpoint = tf.train.latest_checkpoint(FLAGS.output_dir)
initial_epoch = 0
if latest_checkpoint:
# checkpoint.restore must be within a strategy.scope() so that optimizer
# slot variables are mirrored.
checkpoint.restore(latest_checkpoint)
logging.info('Loaded checkpoint %s', latest_checkpoint)
initial_epoch = optimizer.iterations.numpy() // steps_per_epoch
@tf.function
def train_step(iterator):
"""Training StepFn."""
def step_fn(inputs):
"""Per-Replica StepFn."""
images, labels = inputs
if FLAGS.adaptive_mixup:
images = tf.identity(images)
else:
images = tf.tile(images, [FLAGS.ensemble_size, 1, 1, 1])
if FLAGS.adaptive_mixup:
labels = tf.identity(labels)
elif FLAGS.mixup_alpha > 0:
labels = tf.tile(labels, [FLAGS.ensemble_size, 1])
else:
labels = tf.tile(labels, [FLAGS.ensemble_size])
with tf.GradientTape() as tape:
logits = model(images, training=True)
if FLAGS.use_bfloat16:
logits = tf.cast(logits, tf.float32)
probs = tf.nn.softmax(logits)
per_probs = tf.reshape(
probs,
tf.concat([[FLAGS.ensemble_size, -1], probs.shape[1:]], 0))
diversity_results = um.average_pairwise_diversity(
per_probs, FLAGS.ensemble_size)
if FLAGS.mixup_alpha > 0:
negative_log_likelihood = tf.reduce_mean(
tf.keras.losses.categorical_crossentropy(
labels, logits, from_logits=True))
else:
negative_log_likelihood = tf.reduce_mean(
tf.keras.losses.sparse_categorical_crossentropy(
labels, logits, from_logits=True))
filtered_variables = []
for var in model.trainable_variables:
# Apply l2 on the slow weights and bias terms. This excludes BN
# parameters and fast weight approximate posterior/prior parameters,
# but pay caution to their naming scheme.
if 'kernel' in var.name or 'bias' in var.name:
filtered_variables.append(tf.reshape(var, (-1, )))
l2_loss = FLAGS.l2 * 2 * tf.nn.l2_loss(
tf.concat(filtered_variables, axis=0))
loss = negative_log_likelihood + l2_loss
# Scale the loss given the TPUStrategy will reduce sum all gradients.
scaled_loss = loss / strategy.num_replicas_in_sync
grads = tape.gradient(scaled_loss, model.trainable_variables)
# Separate learning rate implementation.
if FLAGS.fast_weight_lr_multiplier != 1.0:
grads_and_vars = []
for grad, var in zip(grads, model.trainable_variables):
# Apply different learning rate on the fast weights. This excludes BN
# and slow weights, but pay caution to the naming scheme.
if ('batch_norm' not in var.name
and 'kernel' not in var.name):
grads_and_vars.append(
(grad * FLAGS.fast_weight_lr_multiplier, var))
else:
grads_and_vars.append((grad, var))
optimizer.apply_gradients(grads_and_vars)
else:
optimizer.apply_gradients(zip(grads,
model.trainable_variables))
if FLAGS.mixup_alpha > 0:
labels = tf.argmax(labels, axis=-1)
metrics['train/ece'].update_state(labels, probs)
metrics['train/loss'].update_state(loss)
metrics['train/negative_log_likelihood'].update_state(
negative_log_likelihood)
metrics['train/accuracy'].update_state(labels, logits)
for k, v in diversity_results.items():
training_diversity['train/' + k].update_state(v)
strategy.run(step_fn, args=(next(iterator), ))
@tf.function
def test_step(iterator, dataset_name):
"""Evaluation StepFn."""
def step_fn(inputs):
"""Per-Replica StepFn."""
images, labels = inputs
images = tf.tile(images, [FLAGS.ensemble_size, 1, 1, 1])
logits = model(images, training=False)
if FLAGS.use_bfloat16:
logits = tf.cast(logits, tf.float32)
probs = tf.nn.softmax(logits)
if dataset_name == 'clean':
per_probs_tensor = tf.reshape(
probs,
tf.concat([[FLAGS.ensemble_size, -1], probs.shape[1:]], 0))
diversity_results = um.average_pairwise_diversity(
per_probs_tensor, FLAGS.ensemble_size)
for k, v in diversity_results.items():
test_diversity['test/' + k].update_state(v)
per_probs = tf.split(probs,
num_or_size_splits=FLAGS.ensemble_size,
axis=0)
probs = tf.reduce_mean(per_probs, axis=0)
negative_log_likelihood = tf.reduce_mean(
tf.keras.losses.sparse_categorical_crossentropy(labels, probs))
for i in range(FLAGS.ensemble_size):
member_probs = per_probs[i]
if dataset_name == 'clean':
member_loss = tf.keras.losses.sparse_categorical_crossentropy(
labels, member_probs)
metrics['test/nll_member_{}'.format(i)].update_state(
member_loss)
metrics['test/accuracy_member_{}'.format(i)].update_state(
labels, member_probs)
metrics['test/member_accuracy_mean'].update_state(
labels, member_probs)
metrics['test/member_ece_mean'].update_state(
labels, member_probs)
elif dataset_name != 'confidence_validation':
corrupt_metrics['test/member_acc_mean_{}'.format(
dataset_name)].update_state(labels, member_probs)
corrupt_metrics['test/member_ece_mean_{}'.format(
dataset_name)].update_state(labels, member_probs)
if dataset_name == 'clean':
metrics['test/negative_log_likelihood'].update_state(
negative_log_likelihood)
metrics['test/accuracy'].update_state(labels, probs)
metrics['test/ece'].update_state(labels, probs)
elif dataset_name != 'confidence_validation':
corrupt_metrics['test/nll_{}'.format(
dataset_name)].update_state(negative_log_likelihood)
corrupt_metrics['test/accuracy_{}'.format(
dataset_name)].update_state(labels, probs)
corrupt_metrics['test/ece_{}'.format(
dataset_name)].update_state(labels, probs)
if dataset_name == 'confidence_validation':
return tf.stack(per_probs, 0), labels
if dataset_name == 'confidence_validation':
return strategy.run(step_fn, args=(next(iterator), ))
else:
strategy.run(step_fn, args=(next(iterator), ))
metrics.update({'test/ms_per_example': tf.keras.metrics.Mean()})
train_iterator = iter(train_dataset)
start_time = time.time()
for epoch in range(initial_epoch, FLAGS.train_epochs):
logging.info('Starting to run epoch: %s', epoch)
for step in range(steps_per_epoch):
train_step(train_iterator)
current_step = epoch * steps_per_epoch + (step + 1)
max_steps = steps_per_epoch * FLAGS.train_epochs
time_elapsed = time.time() - start_time
steps_per_sec = float(current_step) / time_elapsed
eta_seconds = (max_steps - current_step) / steps_per_sec
message = ('{:.1%} completion: epoch {:d}/{:d}. {:.1f} steps/s. '
'ETA: {:.0f} min. Time elapsed: {:.0f} min'.format(
current_step / max_steps, epoch + 1,
FLAGS.train_epochs, steps_per_sec, eta_seconds / 60,
time_elapsed / 60))
if step % 20 == 0:
logging.info(message)
if FLAGS.adaptive_mixup:
confidence_set_iterator = iter(imagenet_confidence_dataset)
predictions_list = []
labels_list = []
for step in range(FLAGS.confidence_eval_iterations):
temp_predictions, temp_labels = test_step(
confidence_set_iterator, 'confidence_validation')
predictions_list.append(temp_predictions)
labels_list.append(temp_labels)
predictions = [
tf.concat(list(predictions_list[i].values), axis=1)
for i in range(len(predictions_list))
]
labels = [
tf.concat(list(labels_list[i].values), axis=0)
for i in range(len(labels_list))
]
predictions = tf.concat(predictions, axis=1)
labels = tf.cast(tf.concat(labels, axis=0), tf.int64)
def compute_acc_conf(preds, label, focus_class):
class_preds = tf.boolean_mask(preds,
label == focus_class,
axis=1)
class_pred_labels = tf.argmax(class_preds, axis=-1)
confidence = tf.reduce_mean(
tf.reduce_max(class_preds, axis=-1), -1)
accuracy = tf.reduce_mean(tf.cast(
class_pred_labels == focus_class, tf.float32),
axis=-1)
return accuracy - confidence
calibration_per_class = [
compute_acc_conf(predictions, labels, i)
for i in range(NUM_CLASSES)
]
calibration_per_class = tf.stack(calibration_per_class, axis=1)
logging.info('calibration per class')
logging.info(calibration_per_class)
mixup_coeff = tf.where(calibration_per_class > 0, 1.0,
FLAGS.mixup_alpha)
mixup_coeff = tf.clip_by_value(mixup_coeff, 0, 1)
logging.info('mixup coeff')
logging.info(mixup_coeff)
mixup_params['mixup_coeff'] = mixup_coeff
imagenet_train = utils.ImageNetInput(
is_training=True,
data_dir=FLAGS.data_dir,
batch_size=per_core_batch_size,
one_hot=(FLAGS.mixup_alpha > 0),
use_bfloat16=FLAGS.use_bfloat16,
mixup_params=mixup_params)
train_dataset = strategy.experimental_distribute_datasets_from_function(
imagenet_train.input_fn)
train_iterator = iter(train_dataset)
datasets_to_evaluate = {'clean': test_datasets['clean']}
if (FLAGS.corruptions_interval > 0
and (epoch + 1) % FLAGS.corruptions_interval == 0):
datasets_to_evaluate = test_datasets
for dataset_name, test_dataset in datasets_to_evaluate.items():
test_iterator = iter(test_dataset)
logging.info('Testing on dataset %s', dataset_name)
for step in range(steps_per_eval):
if step % 20 == 0:
logging.info('Starting to run eval step %s of epoch: %s',
step, epoch)
test_start_time = time.time()
test_step(test_iterator, dataset_name)
ms_per_example = (time.time() -
test_start_time) * 1e6 / batch_size
metrics['test/ms_per_example'].update_state(ms_per_example)
logging.info('Done with testing on %s', dataset_name)
corrupt_results = {}
if (FLAGS.corruptions_interval > 0
and (epoch + 1) % FLAGS.corruptions_interval == 0):
corrupt_results = utils.aggregate_corrupt_metrics(
corrupt_metrics, corruption_types, max_intensity,
FLAGS.alexnet_errors_path)
logging.info('Train Loss: %.4f, Accuracy: %.2f%%',
metrics['train/loss'].result(),
metrics['train/accuracy'].result() * 100)
logging.info('Test NLL: %.4f, Accuracy: %.2f%%',
metrics['test/negative_log_likelihood'].result(),
metrics['test/accuracy'].result() * 100)
for i in range(FLAGS.ensemble_size):
logging.info(
'Member %d Test Loss: %.4f, Accuracy: %.2f%%', i,
metrics['test/nll_member_{}'.format(i)].result(),
metrics['test/accuracy_member_{}'.format(i)].result() * 100)
total_metrics = metrics.copy()
total_metrics.update(training_diversity)
total_metrics.update(test_diversity)
total_results = {
name: metric.result()
for name, metric in total_metrics.items()
}
total_results.update(corrupt_results)
with summary_writer.as_default():
for name, result in total_results.items():
tf.summary.scalar(name, result, step=epoch + 1)
for _, metric in total_metrics.items():
metric.reset_states()
if (FLAGS.checkpoint_interval > 0
and (epoch + 1) % FLAGS.checkpoint_interval == 0):
checkpoint_name = checkpoint.save(
os.path.join(FLAGS.output_dir, 'checkpoint'))
logging.info('Saved checkpoint to %s', checkpoint_name)
final_save_name = os.path.join(FLAGS.output_dir, 'model')
model.save(final_save_name)
logging.info('Saved model to %s', final_save_name)