Пример #1
0
def test_breakend_rev_fwd_false():
    rec = record.BreakEnd("chr2", 1234, record.REVERSE, record.FORWARD, "A",
                          False)
    # test initialization
    EXPECTED = "BreakEnd('chr2', 1234, '-', '+', 'A', False)"
    assert EXPECTED == str(rec)
    # test serialize()
    EXPECTED = "A[<chr2>:1234["
    assert EXPECTED == rec.serialize()
Пример #2
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def test_breakend_rev_rev_true():
    rec = record.BreakEnd("chr2", 1234, record.REVERSE, record.REVERSE, "A",
                          True)
    # test initialization
    EXPECTED = "BreakEnd('chr2', 1234, '-', '-', 'A', True)"
    assert EXPECTED == str(rec)
    # test serialize()
    EXPECTED = "A]chr2:1234]"
    assert EXPECTED == rec.serialize()
Пример #3
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def test_breakend_fwd_fwd_true():
    rec = record.BreakEnd("chr2", 1234, record.FORWARD, record.FORWARD, "A",
                          True)
    # test initialization
    EXPECTED = "BreakEnd('chr2', 1234, '+', '+', 'A', True)"
    assert EXPECTED == str(rec)
    # test serialize()
    EXPECTED = "[chr2:1234[A"
    assert EXPECTED == rec.serialize()