def render(self):
rec = self._context.recording
res = self._context.sorting_result
rows = []
rows.append(vd.tr(vd.th('Study'), vd.td(rec.study().name())))
rows.append(vd.tr(vd.th('Recording'), vd.td(rec.name())))
rows.append(vd.tr(vd.th('Directory'), vd.td(rec.directory())))
true_units = rec.trueUnitsInfo(format='json')
rows.append(
vd.tr(vd.th('Num. true units'),
vd.td('{}'.format(len(true_units)))))
RX = rec.recordingExtractor()
rows.append(
vd.tr(vd.th('Num. channels'),
vd.td('{}'.format(len(RX.getChannelIds())))))
rows.append(
vd.tr(vd.th('Samplerate'),
vd.td('{}'.format(RX.getSamplingFrequency()))))
recording_file_is_local = rec.recordingFileIsLocal()
if recording_file_is_local:
elmt = 'True'
else:
elmt = vd.span(
'False', ' ',
vd.a('(download)', onclick=self._on_download_recording_file))
rows.append(vd.tr(vd.th('raw.mda is downloaded'), vd.td(elmt)))
firings_true_file_is_local = rec.firingsTrueFileIsLocal()
if firings_true_file_is_local:
elmt = 'True'
else:
elmt = vd.span(
'False', ' ',
vd.a('(download)',
onclick=self._on_download_firings_true_file))
rows.append(vd.tr(vd.th('firings_true.mda is downloaded'),
vd.td(elmt)))
if res:
rows.append(vd.tr(vd.th('Sorting result'),
vd.td(res.sorterName())))
sorting = res.sorting()
rows.append(
vd.tr(vd.th('Num. sorted units'),
vd.td('{}'.format(len(sorting.getUnitIds())))))
table = vd.table(rows,
style={
'text-align': 'left',
'width': 'auto',
'font-size': '13px'
},
class_='table')
return ScrollArea(vd.div(table), size=self._size)
def render(self):
if self._current_window:
return vd.div(vd.a('home', onclick=self._on_home),
self._current_window)
elmts = [
vd.a(item['label'],
onclick=lambda item=item: self._open_item(item))
for item in self._contents
]
rows = [vd.tr(vd.td(elmt)) for elmt in elmts]
table = vd.table(rows)
return vd.div(table, style=dict(padding='30px'))
def _to_table(X, column_names):
rows = []
rows.append(vd.tr([vd.th(cname) for cname in column_names]))
for x in X:
elmts = []
for cname in column_names:
tmp = x.get(cname)
if tmp:
if 'callback' in tmp:
elmt = vd.a(tmp['text'], onclick=tmp['callback'])
else:
elmt = vd.span(str(tmp.get('text')))
else:
elmt = vd.span('N/A')
elmts.append(elmt)
rows.append(vd.tr([vd.td(elmt) for elmt in elmts]))
return vd.table(rows, class_='table')
def render(self):
if not self._recording:
return vd.div('---')
rec = self._recording
rows = []
rows.append(vd.tr(vd.th('Study'), vd.td(rec.study().name())))
rows.append(vd.tr(vd.th('Recording'), vd.td(rec.name())))
rows.append(vd.tr(vd.th('Directory'), vd.td(rec.directory())))
true_units = rec.trueUnitsInfo(format='json')
if true_units:
rows.append(
vd.tr(vd.th('Num. true units'),
vd.td('{}'.format(len(true_units)))))
RX = rec.recordingExtractor()
rows.append(
vd.tr(vd.th('Num. channels'),
vd.td('{}'.format(len(RX.getChannelIds())))))
rows.append(
vd.tr(vd.th('Samplerate'),
vd.td('{}'.format(RX.getSamplingFrequency()))))
recording_file_is_local = self._recording.recordingFileIsLocal()
if recording_file_is_local:
elmt = 'True'
else:
elmt = vd.span(
'False', ' ',
vd.a('(download)', onclick=self._on_download_recording_file))
rows.append(vd.tr(vd.th('raw.mda is downloaded'), vd.td(elmt)))
firings_true_file_is_local = self._recording.firingsTrueFileIsLocal()
if firings_true_file_is_local:
elmt = 'True'
else:
elmt = vd.span(
'False', ' ',
vd.a('(download)',
onclick=self._on_download_firings_true_file))
rows.append(vd.tr(vd.th('firings_true.mda is downloaded'),
vd.td(elmt)))
res = None
if self._sorting_result_name:
res = self._recording.sortingResult(self._sorting_result_name)
if res:
rows.append(
vd.tr(vd.th('Sorting result'),
vd.td(self._sorting_result_name)))
sorting = res.sorting()
rows.append(
vd.tr(vd.th('Num. sorted units'),
vd.td('{}'.format(len(sorting.getUnitIds())))))
table = vd.table(rows,
style={
'text-align': 'left',
'width': 'auto',
'font-size': '13px'
},
class_='table')
button_bar = ButtonBar([
('View timeseries', self._on_view_timeseries),
('View electrode geometry', self._on_view_geometry),
('View true unit table', self._on_view_true_units),
('View true unit waveforms', self._on_view_true_unit_waveforms),
('View true unit autocorrelograms',
self._on_view_true_unit_autocorrelograms)
])
elmts = [table, button_bar]
if res:
button_bar_result = ButtonBar([
('View comparison with truth table',
self._on_view_comparison_with_truth_table),
('View sorted unit waveforms',
self._on_view_sorted_unit_waveforms)
])
elmts.append(button_bar_result)
if self._view:
elmts.append(self._view)
return vd.div(elmts)