import vlbi_imaging_utils as vb
import maxen as mx
import numpy as np
import stochastic_optics as so
import vlbi_plots as vp
#observing parameters
tint_sec = 1e5
tadv_sec = 300
tstart_hr = 0.5
tstop_hr = 4.2
bw_hz = 0.5e9
# Load the image and the array
im = vb.load_im_txt('./models/avery_sgra_eofn.txt') #for a text file like the one attached
eht = vb.load_array('./arrays/EHT2017.txt') #see the attached array text file
# If the image has an odd number of pixels, make it even
if im.xdim%2 == 0:
newim = im.imvec.reshape(im.ydim, im.xdim)
newim = newim[:-1,:-1]
im = vb.Image(newim, im.psize, im.ra, im.dec, rf=im.rf, source=im.source, mjd=im.mjd)
# Generate an image prior
obs = im.observe(eht, tint_sec, tadv_sec, tstart_hr, tstop_hr, bw_hz, sgrscat=False, ampcal=True, phasecal=True)
npix = im.psize*(im.xdim-1.0)/im.xdim
npix = 101 #This must be odd
fov = 1.0*im.xdim * im.psize
zbl = np.sum(im.imvec) # total flux
emptyprior = vb.make_square(obs, npix, fov)
import vlbi_imaging_utils as vb
import maxen as mx
import numpy as np
im = vb.load_im_txt('./models/avery_sgra_eofn.txt')
arr = vb.load_array("./arrays/EHT2017_wKP_wRedundant.txt")
tint = 120
tadv = 600
bw = 4e9
obs = im.observe(arr, tint, tadv, 0, 24.0, bw, ampcal=False, phasecal=False, sgrscat=False)
# Generate an image prior
npix = 64
fov = 1.0 * im.xdim*im.psize #160.0*vb.RADPERUAS
zbl = 1.0 # total flux
prior_fwhm = 80*vb.RADPERUAS # Gaussian size in microarcssec
emptyprior = vb.make_square(obs, npix, fov)
flatprior = vb.add_flat(emptyprior, zbl)
gaussprior = vb.add_gauss(emptyprior, zbl, (prior_fwhm, prior_fwhm, 0, 0, 0))
beamparams = obs.fit_beam()
res = 1 / np.max(obs.unpack('uvdist')['uvdist'])
print beamparams
print res
out_cl = mx.maxen_onlyclosure(obs, gaussprior, flux = 1.0, maxit=50, alpha_clphase=10, alpha_clamp=10, gamma=500, delta=1e10, entropy="simple", stop=1e-15, grads=True)
out_cl = mx.maxen_onlyclosure(obs, mx.blur_circ(out_cl, 1e-10), flux = 1.0, maxit=100, alpha_clphase=10, alpha_clamp=10, gamma=500, delta=1e10, entropy="tv", stop=1e-10, grads=True)
out_cl = mx.maxen_onlyclosure(obs, mx.blur_circ(out_cl, 1e-10), flux = 1.0, maxit=100, alpha_clphase=5, alpha_clamp=5, gamma=500, delta=1e10, entropy="tv", stop=1e-10, grads=True)
out_cl = mx.maxen_onlyclosure(obs, mx.blur_circ(out_cl, 1e-10), flux = 1.0, maxit=100, alpha_clphase=5, alpha_clamp=5, gamma=500, delta=1e10, entropy="tv", stop=1e-10, grads=True)
out_cl = mx.maxen_onlyclosure(obs, mx.blur_circ(out_cl, 1e-10), flux = 1.0, maxit=100, alpha_clphase=5, alpha_clamp=5, gamma=500, delta=1e10, entropy="tv", stop=1e-10, grads=True)
tstop_hr = tstart_hr + movielen_hr
tint_sec = 60.0
tadv_sec = 60.0
bw_hz = 4e9
# Load the movie - this will take a while! Not sure why yet!
mov = mv.load_movie_txt('./movie/a9_face/', nframes, framedur_sec)
# I frames are in U column in current movie text files !!!
mov.frames = mov.uframes
# Change the mjd of the movie start to correspond with the desired observation start
mov.mjd = np.floor(mov.mjd) + tstart_hr/24.0
# Load the array
eht = vb.load_array('./arrays/EHT2017.txt')
# Observe the movie
obs = mov.observe(eht, tint_sec, tadv_sec, tstart_hr, .999*tstop_hr, bw_hz)
# OR observe the movie for 24 hr with repeats
obs2 = mov.observe(eht, tint_sec, 10*tadv_sec, 0., 24., bw_hz, repeat=True)
# You can then plot and save to file as normal
obs.plotall('u','v', conj=True) # uv coverage
obs.plotall('uvdist','amp') # amplitude with baseline distance'
obs.plot_bl('SMA','ALMA','phase') # visibility phase on a baseline over time
obs.plot_cphase('SMA', 'SMT', 'ALMA') # closure phase 1-2-3 on a over time
obs.plot_camp('ALMA','LMT','SMA','SPT') # closure amplitude (1-2)(3-4)/(1-4)(2-3) over time
# You can get lists of closure phases and amplitudes and save them to a file
#!/usr/bin/python import vlbi_imaging_utils as vb import numpy as np import sys im = vb.load_im_fits(sys.argv[1], punit="deg") arr = vb.load_array(sys.argv[2]) out = sys.argv[3] tint = float(sys.argv[4]) tadv = float(sys.argv[5]) bw = float(sys.argv[6]) obs = im.observe(arr, tint, tadv, 0, 24.0, bw, ampcal=False, phasecal=False, sgrscat=False) obs.save_txt(out)