raise OutlierCellError(
"Skipping cell with outlier dimensions (%g %g %g %g %g %g" %
unit_cell.parameters())
print >> out, "Integrated data:"
result_array.show_summary(f=out, prefix=" ")
# XXX don't force reference setting here, it will be done later, after the
# original unit cell is recorded
return obj
cxi_merge.load_result = load_result
if (__name__ == "__main__"):
show_plots = False
if ("--plots" in sys.argv):
sys.argv.remove("--plots")
show_plots = True
result = cxi_merge.run(args=sys.argv[1:])
if result is None:
sys.exit(1)
if (show_plots):
try:
result.plots.show_all_pyplot()
from wxtbx.command_line import loggraph
loggraph.run([result.loggraph_file])
except Exception, e:
print "Can't display plots"
print "You should be able to view them by running this command:"
print " wxtbx.loggraph %s" % result.loggraph_file
raise e
params=self.params,
reindex_op=reindex_op,
out=out,
get_predictions_to_edge=self.params.predictions_to_edge.apply,
image_info=image_info,
exclude_CSPAD_sensor=self.params.validation.
exclude_CSPAD_sensor)
if result is None:
return null_data(file_name=file_hash,
log_out=out.getvalue(),
file_error=True)
except OutlierCellError, e:
print >> out, str(e)
return null_data(file_name=file_hash,
log_out=out.getvalue(),
wrong_cell=True)
except WrongBravaisError, e:
print >> out, str(e)
return null_data(file_name=file_hash,
log_out=out.getvalue(),
wrong_bravais=True)
return self.scale_frame_detail(result, file_hash, db_mgr, out)
cxi_merge.scaling_manager = scaling_manager
if (__name__ == "__main__"):
result = run(args=sys.argv[1:])
if result is None:
sys.exit(1)