def __init__(self, parameter, mtype=0):
self.modeltype = mtype
# check whether the parameter is an EmissionDomain
if isinstance(parameter, ghmm.EmissionDomain):
if parameter.CDataType is "int":
self.HMM = ObjectHMM(State,
Transition,
alphabet=parameter,
etype=0)
self.modeltype |= ghmmwrapper.kDiscreteHMM
elif parameter.CDataType is "double":
self.HMM = ObjectHMM(
State,
Transition,
emissionClass=ContinuousMixtureDistribution,
etype=1)
self.modeltype |= ghmmwrapper.kContinuousHMM
else:
raise ghmm.NoValidCDataType, "C data type " + str(
parameter.CDataType) + " invalid."
self.HMM.initHMM(self.modeltype)
# Distribution parameter
elif type(parameter) is type:
self.HMM = ObjectHMM(State,
Transition,
emissionClass=parameter,
etype=1)
self.modeltype |= ghmmwrapper.kContinuousHMM
self.HMM.initHMM(self.modeltype)
# existing hidden markov model
elif isinstance(parameter, ghmm.HMM):
hmm = parameter
self.HMM = ObjectHMM(State, Transition)
if isinstance(hmm, ghmm.DiscreteEmissionHMM):
self.modeltype = hmm.cmodel.model_type
if hmm.cmodel.alphabet is None:
hmm.cmodel.alphabet = self.emissionDomain.toCstruct()
else:
self.modeltype = ghmmwrapper.ContinuousHMM
self.HMM.initHMM(self.modeltype)
self.HMM.buildFromCModel(hmm.cmodel)
# filename
elif isinstance(parameter, str) or isinstance(parameter, unicode):
self.load(parameter)
else:
raise ghmm.UnknownInputType
def __init__(self, master=None):
self.modeltype = 0;
SAGraphEditor.__init__(self, master)
self.cEdgeDefault = '#888888'
self.cLabelDefault = 'black' #'#FF8000' # 230 215 0
self.cVertexDefault = 'red' #'#007EE0' # 0 125 230
self.SetTitle("HMMEd _VERSION_")
self.G = ObjectHMM.ObjectHMM(ObjectHMM.State, ObjectHMM.Transition)
def NewGraph(self):
d = HMMTypeChooser(self.master)
if d.etype == 'open':
self.OpenGraph()
return
else:
self.G = ObjectHMM.ObjectHMM(ObjectHMM.State, ObjectHMM.Transition, etype=d.etype)
self.G.edit(self)
self.graphName = "New"
self.ShowGraph(self.G, self.graphName)
#self.RegisterGraphInformer(HMMInformer(self.G))
self.fileName = None
self.SetTitle("HMMEd _VERSION_")
self.modeltype = self.G.modelType
self.makeMenuBar()
self.SetGraphMenuOptions()
def load(self, filename):
self.HMM = ObjectHMM(State, Transition)
self.HMM.openXML(filename)
self.modeltype = self.HMM.modelType
