w.WlzIndexObjFromCompound(cpd_obj, c.byref(errNum)), None) w.WlzFreeObj(cpd_obj) ChkWoolzError(errNum, 0) MsgVerbose('Cutting index image to a cuboid.') box = w.WlzBoundingBox3I(ref_obj, c.byref(errNum)) ChkWoolzError(errNum, 0) idx_obj_grey_type = w.WLZ_GREY_INT if (idx_max < 255): #{ idx_obj_grey_type = w.WLZ_GREY_UBYTE elif (idx_max < 32768): #}{ idx_obj_grey_type = w.WLZ_GREY_SHORT #} idx_obj = w.WlzAssignObject( w.WlzCutObjToValBox3D(tmp_obj, box, w.enum__WlzGreyType(idx_obj_grey_type), None, 0, 0.0, 0.0, c.byref(errNum)), None) ChkWoolzError(errNum, 0) w.WlzFreeObj(tmp_obj) MsgVerbose('Setting index image voxel size to ' + str(voxel_sz)) w.WlzSetVoxelSize(idx_obj, voxel_sz[0], voxel_sz[1], voxel_sz[2]) MsgVerbose('Creating index object property list.') p_lst = w.WlzMakePropertyList(None) p_str = stage + '_' + model + '_anatomy' p_nam = w.WlzMakeNameProperty(p_str.encode('utf-8'), c.byref(errNum)) ChkWoolzError(errNum, 0) p_org = w.WlzMakeTextProperty('Origin'.encode('utf-8'), origin.encode('utf-8'), c.byref(errNum))