示例#1
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def exportIntervalsAsBedsolo(infile, outfile):
    '''Export list of intervals passing fold change threshold to file '''
    fc = PARAMS["intervals_min_fc"]
    PIntervals.exportMacsIntervalsAsBed(infile, outfile, fc)
示例#2
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def summarizeMACSsolo(infiles, outfile):
    '''run MACS for peak detection.'''
    PIntervals.summarizeMACSsolo(infiles, outfile)
示例#3
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def loadMACSsolo(infiles, outfile):
    infile, bamfile = infiles
    PIntervals.loadMACS(infile, outfile, bamfile)
示例#4
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def exportIntervalsAsBedsolo(infile, outfile):
    '''Export list of intervals passing fold change threshold to file '''
    fc = PARAMS["intervals_min_fc"]
    PIntervals.exportMacsIntervalsAsBed(infile, outfile, fc)
示例#5
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def summarizeMACSsolo(infiles, outfile):
    '''run MACS for peak detection.'''
    PIntervals.summarizeMACSsolo(infiles, outfile)
示例#6
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def loadMACSsolo(infiles, outfile):
    infile, bamfile = infiles
    PIntervals.loadMACS(infile, outfile, bamfile)