def open_window_add(self):
self.window = QtWidgets.QMainWindow()
self.ui = Ui_AddUnusualAminoAcid()
self.ui.setupUi(self.window)
self.window.show()
def open_info_i(self, communique):
self.open = QtWidgets.QFrame()
self.ui = Ui_Frame_i()
self.ui.setupUi_i(self.open, communique)
self.open.show()
def open_window_delete(self):
self.window = QtWidgets.QMainWindow()
self.ui = Ui_DeleteUnusualAmino()
self.ui.setupUi(self.window)
self.window.show()
class Ui_MainWindow(object):
def setupUi(self, MainWindow):
MainWindow.setObjectName("MainWindow")
MainWindow.resize(1251, 456)
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap("peptid logo/logo1.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
MainWindow.setWindowIcon(icon)
self.centralwidget = QtWidgets.QWidget(MainWindow)
self.centralwidget.setObjectName("centralwidget")
self.gridLayout = QtWidgets.QGridLayout(self.centralwidget)
self.gridLayout.setObjectName("gridLayout")
self.frame_3 = QtWidgets.QFrame(self.centralwidget)
self.frame_3.setFrameShape(QtWidgets.QFrame.StyledPanel)
self.frame_3.setFrameShadow(QtWidgets.QFrame.Raised)
self.frame_3.setObjectName("frame_3")
self.gridLayout_3 = QtWidgets.QGridLayout(self.frame_3)
self.gridLayout_3.setObjectName("gridLayout_3")
self.label_4 = QtWidgets.QLabel(self.frame_3)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.label_4.setFont(font)
self.label_4.setObjectName("label_4")
self.gridLayout_3.addWidget(self.label_4, 0, 0, 1, 1)
self.lineEdit_2 = QtWidgets.QLineEdit(self.frame_3)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.lineEdit_2.setFont(font)
self.lineEdit_2.setObjectName("lineEdit_2")
self.gridLayout_3.addWidget(self.lineEdit_2, 0, 1, 1, 1)
self.gridLayout.addWidget(self.frame_3, 2, 0, 1, 1)
self.groupBox = QtWidgets.QGroupBox(self.centralwidget)
font = QtGui.QFont()
font.setPointSize(10)
self.groupBox.setFont(font)
self.groupBox.setObjectName("groupBox")
self.formLayout = QtWidgets.QFormLayout(self.groupBox)
self.formLayout.setObjectName("formLayout")
self.checkBox_2 = QtWidgets.QCheckBox(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.checkBox_2.setFont(font)
self.checkBox_2.setObjectName("checkBox_2")
self.formLayout.setWidget(0, QtWidgets.QFormLayout.LabelRole,
self.checkBox_2)
self.checkBox = QtWidgets.QCheckBox(self.groupBox)
font = QtGui.QFont()
font.setPointSize(10)
self.checkBox.setFont(font)
self.checkBox.setObjectName("checkBox")
self.formLayout.setWidget(1, QtWidgets.QFormLayout.LabelRole,
self.checkBox)
self.gridLayout.addWidget(self.groupBox, 0, 0, 1, 1)
self.frame_2 = QtWidgets.QFrame(self.centralwidget)
self.frame_2.setFrameShape(QtWidgets.QFrame.StyledPanel)
self.frame_2.setFrameShadow(QtWidgets.QFrame.Raised)
self.frame_2.setObjectName("frame_2")
self.gridLayout_2 = QtWidgets.QGridLayout(self.frame_2)
self.gridLayout_2.setObjectName("gridLayout_2")
self.label_3 = QtWidgets.QLabel(self.frame_2)
font = QtGui.QFont()
font.setBold(True)
font.setWeight(75)
self.label_3.setFont(font)
self.label_3.setObjectName("label_3")
self.gridLayout_2.addWidget(self.label_3, 0, 2, 1, 1)
self.comboBox = QtWidgets.QComboBox(self.frame_2)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.comboBox.setFont(font)
self.comboBox.setObjectName("comboBox")
self.gridLayout_2.addWidget(self.comboBox, 1, 0, 1, 1)
self.label_2 = QtWidgets.QLabel(self.frame_2)
font = QtGui.QFont()
font.setBold(True)
font.setWeight(75)
self.label_2.setFont(font)
self.label_2.setObjectName("label_2")
self.gridLayout_2.addWidget(self.label_2, 0, 1, 1, 1)
self.label = QtWidgets.QLabel(self.frame_2)
font = QtGui.QFont()
font.setBold(True)
font.setWeight(75)
self.label.setFont(font)
self.label.setObjectName("label")
self.gridLayout_2.addWidget(self.label, 0, 0, 1, 1)
self.lineEdit = QtWidgets.QLineEdit(self.frame_2)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.lineEdit.setFont(font)
self.lineEdit.setObjectName("lineEdit")
self.gridLayout_2.addWidget(self.lineEdit, 1, 1, 1, 1)
self.comboBox_2 = QtWidgets.QComboBox(self.frame_2)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.comboBox_2.setFont(font)
self.comboBox_2.setObjectName("comboBox_2")
self.gridLayout_2.addWidget(self.comboBox_2, 1, 2, 1, 1)
self.pushButton = QtWidgets.QPushButton(self.frame_2)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(True)
font.setWeight(75)
self.pushButton.setFont(font)
self.pushButton.setObjectName("pushButton")
self.gridLayout_2.addWidget(self.pushButton, 2, 0, 1, 3)
self.gridLayout.addWidget(self.frame_2, 1, 0, 1, 1)
self.frame = QtWidgets.QFrame(self.centralwidget)
self.frame.setFrameShape(QtWidgets.QFrame.StyledPanel)
self.frame.setFrameShadow(QtWidgets.QFrame.Raised)
self.frame.setObjectName("frame")
self.verticalLayout = QtWidgets.QVBoxLayout(self.frame)
self.verticalLayout.setObjectName("verticalLayout")
self.label_5 = QtWidgets.QLabel(self.frame)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(True)
font.setWeight(75)
self.label_5.setFont(font)
self.label_5.setStyleSheet("color: rgb(0, 0, 0);")
self.label_5.setObjectName("label_5")
self.verticalLayout.addWidget(self.label_5)
self.lineEdit_3 = QtWidgets.QLineEdit(self.frame)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.lineEdit_3.setFont(font)
self.lineEdit_3.setStyleSheet("color: rgb(0, 0, 255);\n"
"background-color: rgb(170, 255, 255);")
self.lineEdit_3.setObjectName("lineEdit_3")
self.verticalLayout.addWidget(self.lineEdit_3)
self.gridLayout.addWidget(self.frame, 3, 0, 1, 1)
MainWindow.setCentralWidget(self.centralwidget)
self.menubar = QtWidgets.QMenuBar(MainWindow)
self.menubar.setGeometry(QtCore.QRect(0, 0, 1251, 22))
self.menubar.setObjectName("menubar")
self.menuMenu = QtWidgets.QMenu(self.menubar)
self.menuMenu.setObjectName("menuMenu")
MainWindow.setMenuBar(self.menubar)
self.statusbar = QtWidgets.QStatusBar(MainWindow)
self.statusbar.setObjectName("statusbar")
MainWindow.setStatusBar(self.statusbar)
self.actionShow = QtWidgets.QAction(MainWindow)
self.actionShow.setObjectName("actionShow")
self.actionShow_Protected_Amino_Acid = QtWidgets.QAction(MainWindow)
font = QtGui.QFont()
font.setPointSize(10)
self.actionShow_Protected_Amino_Acid.setFont(font)
self.actionShow_Protected_Amino_Acid.setObjectName(
"actionShow_Protected_Amino_Acid")
self.actionShow_Not_Protected_Amino_Acid = QtWidgets.QAction(
MainWindow)
font = QtGui.QFont()
font.setPointSize(10)
self.actionShow_Not_Protected_Amino_Acid.setFont(font)
self.actionShow_Not_Protected_Amino_Acid.setObjectName(
"actionShow_Not_Protected_Amino_Acid")
self.actionAdd_Custom_Amino_Acid = QtWidgets.QAction(MainWindow)
font = QtGui.QFont()
font.setPointSize(10)
self.actionAdd_Custom_Amino_Acid.setFont(font)
self.actionAdd_Custom_Amino_Acid.setObjectName(
"actionAdd_Custom_Amino_Acid")
self.actionExit = QtWidgets.QAction(MainWindow)
font = QtGui.QFont()
font.setPointSize(10)
self.actionExit.setFont(font)
self.actionExit.setObjectName("actionExit")
self.actionInstruction = QtWidgets.QAction(MainWindow)
font = QtGui.QFont()
font.setPointSize(10)
self.actionInstruction.setFont(font)
self.actionInstruction.setObjectName("actionInstruction")
self.actionTerminus = QtWidgets.QAction(MainWindow)
font = QtGui.QFont()
font.setPointSize(10)
self.actionTerminus.setFont(font)
self.actionTerminus.setObjectName("actionTerminus")
self.actionDelete_Unusual_Amino_Acid = QtWidgets.QAction(MainWindow)
font = QtGui.QFont()
font.setPointSize(10)
self.actionDelete_Unusual_Amino_Acid.setFont(font)
self.actionDelete_Unusual_Amino_Acid.setObjectName(
"actionDelete_Unusual_Amino_Acid")
self.actionShow_Unusual_Amino_Acid = QtWidgets.QAction(MainWindow)
font = QtGui.QFont()
font.setPointSize(10)
self.actionShow_Unusual_Amino_Acid.setFont(font)
self.actionShow_Unusual_Amino_Acid.setObjectName(
"actionShow_Unusual_Amino_Acid")
self.menuMenu.addAction(self.actionShow_Unusual_Amino_Acid)
self.menuMenu.addAction(self.actionShow_Not_Protected_Amino_Acid)
self.menuMenu.addAction(self.actionShow_Protected_Amino_Acid)
self.menuMenu.addAction(self.actionTerminus)
self.menuMenu.addAction(self.actionAdd_Custom_Amino_Acid)
self.menuMenu.addAction(self.actionDelete_Unusual_Amino_Acid)
self.menuMenu.addAction(self.actionInstruction)
self.menuMenu.addAction(self.actionExit)
self.menubar.addAction(self.menuMenu.menuAction())
self.retranslateUi(MainWindow)
QtCore.QMetaObject.connectSlotsByName(MainWindow)
MainWindow.setTabOrder(self.checkBox_2, self.checkBox)
MainWindow.setTabOrder(self.checkBox, self.comboBox)
MainWindow.setTabOrder(self.comboBox, self.lineEdit)
MainWindow.setTabOrder(self.lineEdit, self.comboBox_2)
MainWindow.setTabOrder(self.comboBox_2, self.pushButton)
MainWindow.setTabOrder(self.pushButton, self.lineEdit_2)
'''connection between interface buttons and functions'''
self.actionShow_Unusual_Amino_Acid.triggered.connect(
self.open_data_printer_unusual)
self.actionShow_Protected_Amino_Acid.triggered.connect(
self.amino_protected)
self.actionShow_Not_Protected_Amino_Acid.triggered.connect(
self.amino_not_protected)
self.actionTerminus.triggered.connect(self.endings)
self.actionDelete_Unusual_Amino_Acid.triggered.connect(
self.open_window_delete)
self.actionAdd_Custom_Amino_Acid.triggered.connect(
self.open_window_add)
self.actionInstruction.triggered.connect(self.help)
self.actionExit.triggered.connect(MainWindow.close)
self.pushButton.clicked.connect(self.open_calculation_process)
'''add items to the combo box'''
self.n_terminus_list = [
"Hydrogen",
"Biotin",
"Acetyl",
'5-FAM',
'5-TAMRA',
'DABCYL',
'Fmoc',
'Pyr',
'Myr',
'DOTA',
]
self.c_terminus_list = [
"Free",
"Amide",
'Aldehyde',
'AFC',
'CMK',
'EDANS',
]
self.comboBox.addItems(self.n_terminus_list)
self.comboBox_2.addItems(self.c_terminus_list)
def open_calculation_process(self):
self.lineEdit_3.setText('') # cleans results
self.lineEdit_2.setText('') # cleans results
if self.checkBox.isChecked() and self.checkBox_2.isChecked():
return self.open_error('Please choose only one Amino Acid Type')
if self.checkBox_2.isChecked():
self.user_choice_1 = "P"
else:
if self.checkBox.isChecked():
self.user_choice_1 = 'N'
else:
return self.open_error('Please choose Amino Acid Type')
'''get ending type'''
self.n_terminus = self.comboBox.currentText()
self.c_terminus = self.comboBox_2.currentText()
'''transforms user choice'''
self.user_choice = self.user_choice_1 + str("E")
self.data_input = self.lineEdit.text() # takes data from LineEdit
self.counting = Sequence()
'''sends sequence from lineEdit to calculator'''
calculation_return = self.counting.enter_sequence(
self.data_input, self.user_choice, self.n_terminus,
self.c_terminus) # use return multiple values
if calculation_return[0:6] == 'Please': # Please - means an error
return self.open_error(calculation_return)
else:
result = calculation_return[0]
if result == 'Please be informed that sequence is incorrect;Amino acid or unusual amino acid, doesnt exist':
return self.open_error(result)
else:
pep_sequence = calculation_return[1]
converted_result = str(result)
convert_pep_sequence = str(pep_sequence)
# gives result to Interface
self.lineEdit_3.setText(converted_result)
# gives sequence to Interface
self.lineEdit_2.setText(convert_pep_sequence)
def open_data_printer_unusual(self):
self.menuMenu.setEnabled(False) # block menu
# block "menu show function" in case user uses keyboard shortcut
self.disables_menu_buttons()
self.unusualamino = Data_Printer()
comunicate = self.unusualamino.print_unusual_amino_acid()
if comunicate != None: # if file exist returns None if error then returns message
return self.open_error(comunicate)
self.enable_menu_buttons()
self.menuMenu.setEnabled(True)
def amino_protected(self):
return self.open_data_printer_protected_and_not('protected')
def amino_not_protected(self):
return self.open_data_printer_protected_and_not('notprotected')
def endings(self):
return self.open_data_printer_protected_and_not('endings')
def open_data_printer_protected_and_not(self, type):
self.menuMenu.setEnabled(False)
self.disables_menu_buttons()
self.amino = Data_Printer()
comunicate = self.amino.print_protected_amino_acid_and_not(type)
if comunicate != None: # Returns none when function "print_protected_amino_acid_and_not" has no error, if ico file does not exist it returns error.
return self.open_error(comunicate)
self.enable_menu_buttons()
self.menuMenu.setEnabled(True)
def open_window_delete(self):
self.window = QtWidgets.QMainWindow()
self.ui = Ui_DeleteUnusualAmino()
self.ui.setupUi(self.window)
self.window.show()
def open_window_add(self):
self.window = QtWidgets.QMainWindow()
self.ui = Ui_AddUnusualAminoAcid()
self.ui.setupUi(self.window)
self.window.show()
def help(self):
path = os.getcwd()
full_path = f'{path}\help text.pdf'
if os.path.isfile(full_path) == False:
return self.open_error(
"Help can't be displayed, because 'help text.pdf' doesn't exist"
)
else:
os.startfile(full_path)
'''open error window'''
def open_error(self, communique):
self.open = QtWidgets.QFrame()
self.ui = Ui_Frame()
self.ui.setupUi(self.open, communique)
self.open.show()
self.enable_menu_buttons()
self.menuMenu.setEnabled(True)
'''disable menu buttons'''
def disables_menu_buttons(self):
self.actionShow_Unusual_Amino_Acid.setEnabled(False)
self.actionShow_Protected_Amino_Acid.setEnabled(False)
self.actionShow_Not_Protected_Amino_Acid.setEnabled(False)
self.actionTerminus.setEnabled(False)
'''enable menu buttons'''
def enable_menu_buttons(self):
self.actionShow_Unusual_Amino_Acid.setEnabled(True)
self.actionShow_Protected_Amino_Acid.setEnabled(True)
self.actionShow_Not_Protected_Amino_Acid.setEnabled(True)
self.actionTerminus.setEnabled(True)
def retranslateUi(self, MainWindow):
_translate = QtCore.QCoreApplication.translate
MainWindow.setWindowTitle(
_translate("MainWindow", "PeptideMassCalculator"))
self.label_4.setText(_translate("MainWindow",
"Peptide Sequence Check"))
self.groupBox.setTitle(
_translate("MainWindow", "Choose Amino Acid Type"))
self.checkBox_2.setText(
_translate("MainWindow", "Protected Amino Acid"))
self.checkBox.setText(
_translate("MainWindow", "Not Protected Amino Acid"))
self.label_3.setText(_translate("MainWindow", "C-Terminus"))
self.label_2.setText(_translate("MainWindow", "Sequence"))
self.label.setText(_translate("MainWindow", "N-Terminus"))
self.pushButton.setText(_translate("MainWindow", "CALCULATE"))
self.label_5.setText(
_translate("MainWindow", "Peptide Molecular Weight"))
self.menuMenu.setTitle(_translate("MainWindow", "Menu"))
self.actionShow.setText(_translate("MainWindow", "Show"))
self.actionShow_Protected_Amino_Acid.setText(
_translate("MainWindow", "Show Protected Amino Acid"))
self.actionShow_Protected_Amino_Acid.setStatusTip(
_translate("MainWindow", "Shows protected amino acid table"))
self.actionShow_Protected_Amino_Acid.setShortcut(
_translate("MainWindow", "Ctrl+2"))
self.actionShow_Not_Protected_Amino_Acid.setText(
_translate("MainWindow", "Show Amino Acid"))
self.actionShow_Not_Protected_Amino_Acid.setStatusTip(
_translate("MainWindow", "Shows amino acid table"))
self.actionShow_Not_Protected_Amino_Acid.setShortcut(
_translate("MainWindow", "Ctrl+1"))
self.actionAdd_Custom_Amino_Acid.setText(
_translate("MainWindow", "Add Unusual Amino Acid"))
self.actionAdd_Custom_Amino_Acid.setStatusTip(
_translate("MainWindow", "Add unusual amino acid"))
self.actionAdd_Custom_Amino_Acid.setShortcut(
_translate("MainWindow", "Ctrl+A"))
self.actionExit.setText(_translate("MainWindow", "Exit"))
self.actionExit.setStatusTip(_translate("MainWindow", "Exit program"))
self.actionExit.setShortcut(_translate("MainWindow", "Ctrl+E"))
self.actionInstruction.setText(_translate("MainWindow", "Help"))
self.actionInstruction.setStatusTip(
_translate("MainWindow",
"Shows Instruction how to use Peptide Mass Calculator"))
self.actionInstruction.setShortcut(_translate("MainWindow", "Ctrl+H"))
self.actionTerminus.setText(_translate("MainWindow", "Show Terminus"))
self.actionTerminus.setToolTip(
_translate("MainWindow", "Show Terminus"))
self.actionTerminus.setStatusTip(
_translate("MainWindow",
"Shows all Terminuses available to choose"))
self.actionTerminus.setShortcut(_translate("MainWindow", "Ctrl+3"))
self.actionDelete_Unusual_Amino_Acid.setText(
_translate("MainWindow", "Delete Unusual Amino Acid"))
self.actionDelete_Unusual_Amino_Acid.setStatusTip(
_translate("MainWindow", "Delete unusual amino acid"))
self.actionDelete_Unusual_Amino_Acid.setShortcut(
_translate("MainWindow", "Ctrl+D"))
self.actionShow_Unusual_Amino_Acid.setText(
_translate("MainWindow", "Show Unusual Amino Acid"))
self.actionShow_Unusual_Amino_Acid.setStatusTip(
_translate("MainWindow", "Shows unusual amino acid table"))
self.actionShow_Unusual_Amino_Acid.setShortcut(
_translate("MainWindow", "Ctrl+0"))
class Ui_DeleteUnusualAmino(object):
def setupUi(self, DeleteUnusualAmino):
DeleteUnusualAmino.setObjectName("DeleteUnusualAmino")
DeleteUnusualAmino.resize(600, 400)
DeleteUnusualAmino.setMinimumSize(QtCore.QSize(600, 400))
DeleteUnusualAmino.setMaximumSize(QtCore.QSize(600, 400))
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap("peptid logo/logo1.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
DeleteUnusualAmino.setWindowIcon(icon)
self.centralwidget = QtWidgets.QWidget(DeleteUnusualAmino)
self.centralwidget.setObjectName("centralwidget")
self.verticalLayout = QtWidgets.QVBoxLayout(self.centralwidget)
self.verticalLayout.setObjectName("verticalLayout")
self.frame = QtWidgets.QFrame(self.centralwidget)
self.frame.setFrameShape(QtWidgets.QFrame.StyledPanel)
self.frame.setFrameShadow(QtWidgets.QFrame.Raised)
self.frame.setObjectName("frame")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.frame)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.label_2 = QtWidgets.QLabel(self.frame)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.label_2.setFont(font)
self.label_2.setObjectName("label_2")
self.verticalLayout_2.addWidget(self.label_2)
self.lineEdit = QtWidgets.QLineEdit(self.frame)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.lineEdit.setFont(font)
self.lineEdit.setObjectName("lineEdit")
self.verticalLayout_2.addWidget(self.lineEdit)
self.label_3 = QtWidgets.QLabel(self.frame)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.label_3.setFont(font)
self.label_3.setObjectName("label_3")
self.verticalLayout_2.addWidget(self.label_3)
self.lineEdit_2 = QtWidgets.QLineEdit(self.frame)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.lineEdit_2.setFont(font)
self.lineEdit_2.setObjectName("lineEdit_2")
self.verticalLayout_2.addWidget(self.lineEdit_2)
self.label = QtWidgets.QLabel(self.frame)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.label.setFont(font)
self.label.setObjectName("label")
self.verticalLayout_2.addWidget(self.label)
self.lineEdit_3 = QtWidgets.QLineEdit(self.frame)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.lineEdit_3.setFont(font)
self.lineEdit_3.setObjectName("lineEdit_3")
self.verticalLayout_2.addWidget(self.lineEdit_3)
self.pushButton = QtWidgets.QPushButton(self.frame)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.pushButton.setFont(font)
self.pushButton.setAutoDefault(False)
self.pushButton.setDefault(True)
self.pushButton.setObjectName("pushButton")
self.verticalLayout_2.addWidget(self.pushButton)
self.verticalLayout.addWidget(self.frame)
DeleteUnusualAmino.setCentralWidget(self.centralwidget)
self.statusbar = QtWidgets.QStatusBar(DeleteUnusualAmino)
self.statusbar.setObjectName("statusbar")
DeleteUnusualAmino.setStatusBar(self.statusbar)
self.retranslateUi(DeleteUnusualAmino)
QtCore.QMetaObject.connectSlotsByName(DeleteUnusualAmino)
self.pushButton.clicked.connect(self.connector1)
def connector1(self):
value = self.lineEdit.text()
value1 = self.lineEdit_2.text()
value2 = self.lineEdit_3.text()
call = Remove()
'''remove unusual amino'''
comunicate = call.remove_unsual_amino(value, value1, value2)
'''shows communicate, and choose communicate type "y" information window'''
if comunicate[-1:] == 'y':
self.open_info_i(comunicate)
'''clears data'''
self.lineEdit.setText('')
self.lineEdit_2.setText('')
self.lineEdit_3.setText('')
else:
self.open_error(comunicate)
'''open info window'''
def open_info_i(self, communique):
self.open = QtWidgets.QFrame()
self.ui = Ui_Frame_i()
self.ui.setupUi_i(self.open, communique)
self.open.show()
'''open error window'''
def open_error(self, communique):
self.open = QtWidgets.QFrame()
self.ui = Ui_Frame()
self.ui.setupUi(self.open, communique)
self.open.show()
def retranslateUi(self, DeleteUnusualAmino):
_translate = QtCore.QCoreApplication.translate
DeleteUnusualAmino.setWindowTitle(_translate("DeleteUnusualAmino", "PeptideMassCalculator - Delete Unusual Amino Acid"))
self.label_2.setText(_translate("DeleteUnusualAmino", "Amino acid"))
self.label_3.setText(_translate("DeleteUnusualAmino", "3-letter abbreviation"))
self.label.setText(_translate("DeleteUnusualAmino", "Molecular weight"))
self.pushButton.setText(_translate("DeleteUnusualAmino", "Delete"))
def open_error(self, communique):
self.open = QtWidgets.QFrame()
self.ui = Ui_Frame()
self.ui.setupUi(self.open, communique)
self.open.show()
class Ui_AddUnusualAminoAcid(object):
def setupUi(self, MainWindow):
MainWindow.setObjectName("MainWindow")
MainWindow.resize(600, 400)
MainWindow.setMinimumSize(QtCore.QSize(600, 400))
MainWindow.setMaximumSize(QtCore.QSize(600, 400))
icon = QtGui.QIcon()
icon.addPixmap(QtGui.QPixmap("peptid logo/logo1.png"),
QtGui.QIcon.Normal, QtGui.QIcon.Off)
MainWindow.setWindowIcon(icon)
self.centralwidget = QtWidgets.QWidget(MainWindow)
self.centralwidget.setObjectName("centralwidget")
self.verticalLayout = QtWidgets.QVBoxLayout(self.centralwidget)
self.verticalLayout.setObjectName("verticalLayout")
self.groupBox = QtWidgets.QGroupBox(self.centralwidget)
self.groupBox.setTitle("")
self.groupBox.setObjectName("groupBox")
self.verticalLayout_2 = QtWidgets.QVBoxLayout(self.groupBox)
self.verticalLayout_2.setObjectName("verticalLayout_2")
self.label_2 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.label_2.setFont(font)
self.label_2.setObjectName("label_2")
self.verticalLayout_2.addWidget(self.label_2)
self.lineEdit_3 = QtWidgets.QLineEdit(self.groupBox)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.lineEdit_3.setFont(font)
self.lineEdit_3.setObjectName("lineEdit_3")
self.verticalLayout_2.addWidget(self.lineEdit_3)
self.label_3 = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.label_3.setFont(font)
self.label_3.setObjectName("label_3")
self.verticalLayout_2.addWidget(self.label_3)
self.lineEdit_2 = QtWidgets.QLineEdit(self.groupBox)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.lineEdit_2.setFont(font)
self.lineEdit_2.setObjectName("lineEdit_2")
self.verticalLayout_2.addWidget(self.lineEdit_2)
self.label = QtWidgets.QLabel(self.groupBox)
font = QtGui.QFont()
font.setPointSize(12)
font.setBold(False)
font.setWeight(50)
self.label.setFont(font)
self.label.setObjectName("label")
self.verticalLayout_2.addWidget(self.label)
self.lineEdit_4 = QtWidgets.QLineEdit(self.groupBox)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.lineEdit_4.setFont(font)
self.lineEdit_4.setObjectName("lineEdit_4")
self.verticalLayout_2.addWidget(self.lineEdit_4)
self.pushButton = QtWidgets.QPushButton(self.groupBox)
font = QtGui.QFont()
font.setPointSize(14)
font.setBold(True)
font.setWeight(75)
self.pushButton.setFont(font)
self.pushButton.setDefault(True)
self.pushButton.setObjectName("pushButton")
self.verticalLayout_2.addWidget(self.pushButton)
self.verticalLayout.addWidget(self.groupBox)
MainWindow.setCentralWidget(self.centralwidget)
self.statusbar = QtWidgets.QStatusBar(MainWindow)
self.statusbar.setObjectName("statusbar")
MainWindow.setStatusBar(self.statusbar)
self.retranslateUi(MainWindow)
QtCore.QMetaObject.connectSlotsByName(MainWindow)
MainWindow.setTabOrder(self.lineEdit_3, self.lineEdit_2)
MainWindow.setTabOrder(self.lineEdit_2, self.lineEdit_4)
MainWindow.setTabOrder(self.lineEdit_4, self.pushButton)
self.pushButton.clicked.connect(self.connector1)
def connector1(self):
value = self.lineEdit_3.text()
value2 = self.lineEdit_2.text()
value3 = self.lineEdit_4.text()
call = Add()
'''starts add unusual amino, save and return comunicate'''
comunicate = call.add_unusual_amino(value, value2, value3)
''' shows communicate, and choose communicate type "y" information window '''
if comunicate[-1:] == 'y':
self.open_info_i(comunicate)
'''clears data'''
self.lineEdit_3.setText('')
self.lineEdit_2.setText('')
self.lineEdit_4.setText('')
else:
self.open_error(comunicate)
def retranslateUi(self, MainWindow):
_translate = QtCore.QCoreApplication.translate
MainWindow.setWindowTitle(
_translate("MainWindow",
"PeptideMassCalculator - Add Unusual Amino Acid"))
self.label_2.setText(_translate("MainWindow", "Amino acid"))
self.label_3.setText(_translate("MainWindow", "3-letter abbreviation"))
self.label.setText(_translate("MainWindow", "Molecular weight"))
self.pushButton.setText(_translate("MainWindow", "Save"))
'''open info window'''
def open_info_i(self, communique):
self.open = QtWidgets.QFrame()
self.ui = Ui_Frame_i()
self.ui.setupUi_i(self.open, communique)
self.open.show()
'''open error window'''
def open_error(self, communique):
self.open = QtWidgets.QFrame()
self.ui = Ui_Frame()
self.ui.setupUi(self.open, communique)
self.open.show()