class send_lhe(): #__________________________________________________________ def __init__(self, njobs, events, process, islsf, iscondor, queue, para): self.njobs = njobs self.events = events self.process = process self.islsf = islsf self.iscondor = iscondor self.queue = queue self.user = os.environ['USER'] self.para = para #__________________________________________________________ def send(self): Dir = os.getcwd() nbjobsSub = 0 gplist = self.para.gridpacklist lhedir = self.para.lhe_dir gpdir = self.para.gp_dir gptotest = '%s/%s.tar.gz' % (gpdir, self.process) if ut.file_exist(gptotest) == False: print 'Gridpack=======', gptotest, '======= does not exist' sys.exit(3) try: gplist[self.process] except KeyError, e: print 'process %s does not exist as gridpack, exit' % self.process sys.exit(3) acctype = 'FCC' if 'HELHC' in self.para.module_name: acctype = 'HELHC' logdir = Dir + "/BatchOutputs/%s/lhe/%s" % (acctype, self.process) if not ut.dir_exist(logdir): os.system("mkdir -p %s" % logdir) yamldir = '%s/lhe/%s' % (self.para.yamldir, self.process) if not ut.dir_exist(yamldir): os.system("mkdir -p %s" % yamldir) if self.islsf == False and self.iscondor == False: print "Submit issue : LSF nor CONDOR flag defined !!!" sys.exit(3) condor_file_str = '' while nbjobsSub < self.njobs: #uid = int(ut.getuid(self.user)) uid = ut.getuid2(self.user) myyaml = my.makeyaml(yamldir, uid) if not myyaml: print 'job %s already exists' % uid continue if ut.file_exist('%s/%s/events_%s.lhe.gz' % (lhedir, self.process, uid)): print 'already exist, continue' continue frunname = 'job%s.sh' % (uid) frunfull = '%s/%s' % (logdir, frunname) frun = None try: frun = open(frunfull, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun = open(frunfull, 'w') commands.getstatusoutput('chmod 777 %s' % frunfull) frun.write('unset LD_LIBRARY_PATH\n') frun.write('unset PYTHONHOME\n') frun.write('unset PYTHONPATH\n') frun.write('mkdir job%s_%s\n' % (uid, self.process)) frun.write('cd job%s_%s\n' % (uid, self.process)) frun.write('export EOS_MGM_URL=\"root://eospublic.cern.ch\"\n') frun.write('source %s\n' % (self.para.stack)) frun.write('mkdir %s\n' % (lhedir)) frun.write('mkdir %s%s\n' % (lhedir, self.process)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s/%s.tar.gz .\n' % (gpdir, self.process)) frun.write('tar -zxf %s.tar.gz\n' % self.process) frun.write('cd process/\n') frun.write('./run.sh %i %i\n' % (self.events, int(uid))) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py events.lhe.gz %s/%s/events_%s.lhe.gz\n' % (lhedir, self.process, uid)) frun.write('cd ..\n') frun.write('rm -rf job%s_%s\n' % (uid, self.process)) frun.close() if self.islsf == True: cmdBatch = "bsub -M 2000000 -R \"rusage[pool=2000]\" -q %s -o %s -cwd %s %s" % ( self.queue, logdir + '/job%s/' % (uid), logdir + '/job%s/' % (uid), logdir + '/' + frunname) #print cmdBatch batchid = -1 job, batchid = ut.SubmitToLsf( cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job elif self.iscondor == True: condor_file_str += frunfull + " " nbjobsSub += 1 if self.iscondor == True: # clean string condor_file_str = condor_file_str.replace("//", "/") # frunname_condor = 'job_desc_lhe.cfg' frunfull_condor = '%s/%s' % (logdir, frunname_condor) frun_condor = None try: frun_condor = open(frunfull_condor, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun_condor = open(frunfull_condor, 'w') commands.getstatusoutput('chmod 777 %s' % frunfull_condor) # frun_condor.write('executable = $(filename)\n') frun_condor.write( 'Log = %s/condor_job.%s.$(ClusterId).$(ProcId).log\n' % (logdir, str(uid))) frun_condor.write( 'Output = %s/condor_job.%s.$(ClusterId).$(ProcId).out\n' % (logdir, str(uid))) frun_condor.write( 'Error = %s/condor_job.%s.$(ClusterId).$(ProcId).error\n' % (logdir, str(uid))) frun_condor.write('getenv = True\n') frun_condor.write('environment = "LS_SUBCWD=%s"\n' % logdir) # not sure frun_condor.write('request_memory = 2G\n') # frun_condor.write('requirements = ( (OpSysAndVer =?= "CentOS7") && (Machine =!= LastRemoteHost) )\n') frun_condor.write( 'requirements = ( (OpSysAndVer =?= "SLCern6") && (Machine =!= LastRemoteHost) )\n' ) frun_condor.write( 'on_exit_remove = (ExitBySignal == False) && (ExitCode == 0)\n' ) frun_condor.write('max_retries = 3\n') frun_condor.write('+JobFlavour = "%s"\n' % self.queue) frun_condor.write('+AccountingGroup = "group_u_FCC.local_gen"\n') frun_condor.write('queue filename matching files %s\n' % condor_file_str) frun_condor.close() # nbjobsSub = 0 cmdBatch = "condor_submit %s" % frunfull_condor print cmdBatch job = ut.SubmitToCondor(cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job print 'succesfully sent %i job(s)' % nbjobsSub
class send_lhe(): #__________________________________________________________ def __init__(self, njobs, events, process, islsf, queue, para): self.njobs = njobs self.events = events self.process = process self.islsf = islsf self.queue = queue self.user = os.environ['USER'] self.para = para #__________________________________________________________ def send(self): Dir = os.getcwd() nbjobsSub = 0 gplist = self.para.gridpacklist lhedir = self.para.lhe_dir gpdir = self.para.gp_dir gptotest = '%s/%s.tar.gz' % (gpdir, self.process) if ut.file_exist(gptotest) == False: print 'Gridpack=======', gptotest, '======= does not exist' sys.exit(3) try: gplist[self.process] except KeyError, e: print 'process %s does not exist as gridpack, exit' % self.process sys.exit(3) acctype = 'FCC' if 'HELHC' in self.para.module_name: acctype = 'HELHC' logdir = Dir + "/BatchOutputs/%s/lhe/%s" % (acctype, self.process) if not ut.dir_exist(logdir): os.system("mkdir -p %s" % logdir) yamldir = '%s/lhe/%s' % (self.para.yamldir, self.process) if not ut.dir_exist(yamldir): os.system("mkdir -p %s" % yamldir) while nbjobsSub < self.njobs: #uid = int(ut.getuid(self.user)) uid = ut.getuid2(self.user) myyaml = my.makeyaml(yamldir, uid) if not myyaml: print 'job %s already exists' % uid continue if ut.file_exist('%s/%s/events_%s.lhe.gz' % (lhedir, self.process, uid)): print 'already exist, continue' continue frunname = 'job%s.sh' % (uid) frunfull = '%s/%s' % (logdir, frunname) frun = None try: frun = open(frunfull, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun = open(frunfull, 'w') commands.getstatusoutput('chmod 777 %s' % frunfull) frun.write('unset LD_LIBRARY_PATH\n') frun.write('unset PYTHONHOME\n') frun.write('unset PYTHONPATH\n') frun.write('mkdir job%s_%s\n' % (uid, self.process)) frun.write('cd job%s_%s\n' % (uid, self.process)) frun.write('export EOS_MGM_URL=\"root://eospublic.cern.ch\"\n') frun.write('source %s\n' % (self.para.stack)) frun.write('mkdir %s\n' % (lhedir)) frun.write('mkdir %s%s\n' % (lhedir, self.process)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s/%s.tar.gz .\n' % (gpdir, self.process)) frun.write('tar -zxf %s.tar.gz\n' % self.process) frun.write('cd process/\n') frun.write('./run.sh %i %i\n' % (self.events, int(uid))) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py events.lhe.gz %s/%s/events_%s.lhe.gz\n' % (lhedir, self.process, uid)) frun.write('cd ..\n') frun.write('rm -rf job%s_%s\n' % (uid, self.process)) cmdBatch = "bsub -M 2000000 -R \"rusage[pool=2000]\" -q %s -o %s -cwd %s %s" % ( self.queue, logdir + '/job%s/' % (uid), logdir + '/job%s/' % (uid), logdir + '/' + frunname) #print cmdBatch batchid = -1 job, batchid = ut.SubmitToLsf(cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job print 'succesfully sent %i jobs' % nbjobsSub
class send_lhep8(): #__________________________________________________________ def __init__(self, njobs, events, process, islsf, iscondor, queue, para, version, decay): self.njobs = njobs self.events = -1 self.process = process self.islsf = islsf self.iscondor = iscondor self.queue = queue self.para = para self.version = version self.decay = decay self.user = os.environ['USER'] #__________________________________________________________ def send(self, force): Dir = os.getcwd() gplist = self.para.gridpacklist outdir = '%s%s/' % (self.para.delphes_dir, self.version) try: gplist[self.process] except KeyError, e: print 'process %s does not exist as gridpack' % self.process sys.exit(3) delphescards_mmr = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_mmr) if ut.file_exist( delphescards_mmr ) == False and self.version != 'cms' and 'helhc' not in self.version: print 'delphes card does not exist: ', delphescards_mmr sys.exit(3) delphescards_mr = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_mr) if ut.file_exist( delphescards_mr ) == False and self.version != 'cms' and 'helhc' not in self.version: print 'delphes card does not exist: ', delphescards_mr sys.exit(3) delphescards_base = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_base) if ut.file_exist(delphescards_base) == False: print 'delphes card does not exist: ', delphescards_base sys.exit(3) fccconfig = '%s%s' % (self.para.fccconfig_dir, self.para.fccconfig) if ut.file_exist(fccconfig) == False: print 'fcc config file does not exist: ', fccconfig sys.exit(3) print '======================================', self.process pythiacard = '%s%s.cmd' % ( self.para.pythiacards_dir, self.process.replace( 'mg_pp', 'p8_pp').replace('mg_gg', 'p8_gg')) if self.decay != '': pythiacard = '%s%s_%s.cmd' % ( self.para.pythiacards_dir, self.process.replace('mg_pp', 'p8_pp').replace( 'mg_gg', 'p8_gg'), self.decay) if ut.file_exist(pythiacard) == False and not force: print 'pythia card does not exist: ', pythiacard timeout = 60 print "do you want to use the default pythia card [y/n] (60sec to reply)" rlist, _, _ = select([sys.stdin], [], [], timeout) if rlist: s = sys.stdin.readline() if s == "y\n": print 'use default card' pythiacard = '%sp8_pp_default.cmd' % ( self.para.pythiacards_dir) else: print 'exit' sys.exit(3) else: print "timeout, use default card" pythiacard = '%sp8_pp_default.cmd' % ( self.para.pythiacards_dir) elif ut.file_exist(pythiacard) == False and force: print "force argument, use default card" pythiacard = '%sp8_pp_default.cmd' % (self.para.pythiacards_dir) pr_noht = '' if '_HT_' in self.process: ssplit = self.process.split('_') stest = '' for s in xrange(0, len(ssplit) - 3): stest += ssplit[s] + '_' pr_noht = stest[0:len(stest) - 1] #check that the specified decay exists if self.process in self.para.decaylist and self.decay != '' and '_HT_' not in self.process: if self.decay not in self.para.decaylist[self.process]: print 'decay ==%s== does not exist for process ==%s==' % ( self.decay, self.process) sys.exit(3) #check that the specified decay exists if pr_noht in self.para.decaylist and self.decay != '' and '_HT_' in self.process: if self.decay not in self.para.decaylist[pr_noht]: print 'decay ==%s== does not exist for process ==%s==' % ( self.decay, self.process) sys.exit(3) pr_decay = self.process if self.decay != '': pr_decay = self.process + '_' + self.decay print '====', pr_decay, '====' processp8 = pr_decay.replace('mg_pp', 'mgp8_pp').replace('mg_gg', 'mgp8_gg') acctype = 'FCC' if 'HELHC' in self.para.module_name: acctype = 'HELHC' logdir = Dir + "/BatchOutputs/%s/%s/%s/" % (acctype, self.version, processp8) if not ut.dir_exist(logdir): os.system("mkdir -p %s" % logdir) yamldir = '%s/%s/%s' % (self.para.yamldir, self.version, processp8) if not ut.dir_exist(yamldir): os.system("mkdir -p %s" % yamldir) yamllhedir = '%s/lhe/%s' % (self.para.yamldir, self.process) All_files = glob.glob("%s/events_*.yaml" % yamllhedir) if len(All_files) == 0: print 'there is no LHE files checked for process %s exit' % self.process sys.exit(3) if len(All_files) < self.njobs: print 'only %i LHE file exists, will not run all the jobs requested' % len( All_files) nbjobsSub = 0 ntmp = 0 if self.islsf == False and self.iscondor == False: print "Submit issue : LSF nor CONDOR flag defined !!!" sys.exit(3) condor_file_str = '' for i in xrange(len(All_files)): if nbjobsSub == self.njobs: break tmpf = None with open(All_files[i], 'r') as stream: try: tmpf = yaml.load(stream) if ut.getsize(All_files[i]) == 0: continue if tmpf['processing']['status'] != 'DONE': continue except yaml.YAMLError as exc: print(exc) jobid = tmpf['processing']['jobid'] myyaml = my.makeyaml(yamldir, jobid) if not myyaml: print 'job %s already exists' % jobid continue outfile = '%s/%s/events_%s.root' % (outdir, processp8, jobid) if ut.file_exist(outfile): print 'outfile already exist, continue ', outfile frunname = 'job%s.sh' % (jobid) frunfull = '%s/%s' % (logdir, frunname) frun = None try: frun = open(frunfull, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun = open(frunfull, 'w') commands.getstatusoutput('chmod 777 %s' % (frunfull)) frun.write('#!/bin/bash\n') frun.write('unset LD_LIBRARY_PATH\n') frun.write('unset PYTHONHOME\n') frun.write('unset PYTHONPATH\n') frun.write('source %s\n' % (self.para.stack)) frun.write('mkdir job%s_%s\n' % (jobid, processp8)) frun.write('cd job%s_%s\n' % (jobid, processp8)) frun.write('export EOS_MGM_URL=\"root://eospublic.cern.ch\"\n') frun.write('mkdir -p %s%s/%s\n' % (self.para.delphes_dir, self.version, processp8)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (tmpf['processing']['out'])) frun.write('gunzip -c %s > events.lhe\n' % tmpf['processing']['out'].split('/')[-1]) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_base)) if 'fcc' in self.version: frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_mmr)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_mr)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s config.py \n' % (fccconfig)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s card.cmd\n' % (pythiacard)) frun.write('echo "Beams:LHEF = events.lhe" >> card.cmd\n') frun.write('echo "Random:seed = %s" >> card.cmd\n' % jobid) if 'helhc' in self.version: frun.write('echo " Beams:eCM = 27000." >> card.cmd\n') frun.write( '%s/run fccrun.py config.py --delphescard=card.tcl --inputfile=card.cmd --outputfile=events_%s.root --nevents=%i\n' % (self.para.fccsw, jobid, self.events)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py events_%s.root %s\n' % (jobid, outfile)) frun.write('cd ..\n') frun.write('rm -rf job%s_%s\n' % (jobid, processp8)) frun.close() if self.islsf == True: cmdBatch = "bsub -M 3000000 -R \"pool=40000\" -q %s -o %s -cwd %s %s" % ( self.queue, logdir + '/job%s/' % (jobid), logdir + '/job%s/' % (jobid), frunfull) batchid = -1 job, batchid = ut.SubmitToLsf( cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job elif self.iscondor == True: condor_file_str += frunfull + " " nbjobsSub += 1 if self.iscondor == True: # clean string condor_file_str = condor_file_str.replace("//", "/") # frunname_condor = 'job_desc_lhep8.cfg' frunfull_condor = '%s/%s' % (logdir, frunname_condor) frun_condor = None try: frun_condor = open(frunfull_condor, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun_condor = open(frunfull_condor, 'w') commands.getstatusoutput('chmod 777 %s' % frunfull_condor) # frun_condor.write('executable = $(filename)\n') frun_condor.write( 'Log = %s/condor_job.%s.$(ClusterId).$(ProcId).log\n' % (logdir, str(jobid))) frun_condor.write( 'Output = %s/condor_job.%s.$(ClusterId).$(ProcId).out\n' % (logdir, str(jobid))) frun_condor.write( 'Error = %s/condor_job.%s.$(ClusterId).$(ProcId).error\n' % (logdir, str(jobid))) frun_condor.write('getenv = True\n') frun_condor.write('environment = "LS_SUBCWD=%s"\n' % logdir) # not sure frun_condor.write('request_memory = 4G\n') # frun_condor.write('requirements = ( (OpSysAndVer =?= "CentOS7") && (Machine =!= LastRemoteHost) )\n') frun_condor.write( 'requirements = ( (OpSysAndVer =?= "SLCern6") && (Machine =!= LastRemoteHost) )\n' ) frun_condor.write( 'on_exit_remove = (ExitBySignal == False) && (ExitCode == 0)\n' ) frun_condor.write('max_retries = 3\n') frun_condor.write('+JobFlavour = "%s"\n' % self.queue) frun_condor.write('+AccountingGroup = "group_u_FCC.local_gen"\n') frun_condor.write('queue filename matching files %s\n' % condor_file_str) frun_condor.close() # nbjobsSub = 0 cmdBatch = "condor_submit %s" % frunfull_condor print cmdBatch job = ut.SubmitToCondor(cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job print 'succesfully sent %i job(s)' % nbjobsSub
class send_p8(): #__________________________________________________________ def __init__(self, njobs, events, process, islsf, queue, para, version): self.njobs = njobs self.events = events self.process = process self.islsf = islsf self.queue = queue self.user = os.environ['USER'] self.para = para self.version = version #__________________________________________________________ def send(self): Dir = os.getcwd() nbjobsSub = 0 p8list = self.para.pythialist outdir = '%s%s/' % (self.para.delphes_dir, self.version) try: p8list[self.process] except KeyError, e: print 'process %s does not exist, exit' % self.process sys.exit(3) acctype = 'FCC' if 'HELHC' in self.para.module_name: acctype = 'HELHC' logdir = Dir + "/BatchOutputs/%s/%s/%s/" % (acctype, self.version, self.process) if not ut.dir_exist(logdir): os.system("mkdir -p %s" % logdir) yamldir = '%s/%s/%s' % (self.para.yamldir, self.version, self.process) if not ut.dir_exist(yamldir): os.system("mkdir -p %s" % yamldir) delphescards_mmr = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_mmr) if ut.file_exist( delphescards_mmr ) == False and self.version != 'cms' and 'helhc' not in self.version: print 'delphes card does not exist: ', delphescards_mmr, ' , exit' sys.exit(3) delphescards_mr = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_mr) if ut.file_exist( delphescards_mr ) == False and self.version != 'cms' and 'helhc' not in self.version: print 'delphes card does not exist: ', delphescards_mr, ' , exit' sys.exit(3) delphescards_base = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_base) if ut.file_exist(delphescards_base) == False: print 'delphes card does not exist: ', delphescards_base, ' , exit' sys.exit(3) fccconfig = '%s%s' % (self.para.fccconfig_dir, self.para.fccconfig) if ut.file_exist(fccconfig) == False: print 'fcc config file does not exist: ', fccconfig, ' , exit' sys.exit(3) print '======================================', self.process pythiacard = '%s%s.cmd' % (self.para.pythiacards_dir, self.process) if ut.file_exist(pythiacard) == False: print 'pythia card does not exist: ', pythiacard, ' , exit' sys.exit(3) while nbjobsSub < self.njobs: uid = ut.getuid2(self.user) myyaml = my.makeyaml(yamldir, uid) if not myyaml: print 'job %s already exists' % uid continue outfile = '%s/%s/events_%s.root' % (outdir, self.process, uid) if ut.file_exist(outfile): print 'file %s already exist, continue' % outfile continue frunname = 'job%s.sh' % (uid) frunfull = '%s/%s' % (logdir, frunname) frun = None try: frun = open(frunfull, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun = open(frunfull, 'w') commands.getstatusoutput('chmod 777 %s' % (frunfull)) frun.write('#!/bin/bash\n') frun.write('unset LD_LIBRARY_PATH\n') frun.write('unset PYTHONHOME\n') frun.write('unset PYTHONPATH\n') frun.write('source %s\n' % (self.para.stack)) frun.write('mkdir job%s_%s\n' % (uid, self.process)) frun.write('cd job%s_%s\n' % (uid, self.process)) frun.write('export EOS_MGM_URL=\"root://eospublic.cern.ch\"\n') frun.write('mkdir -p %s/%s\n' % (outdir, self.process)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_base)) if 'fcc' in self.version: frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_mmr)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_mr)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s config.py \n' % (fccconfig)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s card.cmd\n' % (pythiacard)) frun.write('echo "" >> card.cmd\n') frun.write('echo "Random:seed = %s" >> card.cmd\n' % uid) if 'helhc' in self.version: frun.write('echo " Beams:eCM = 27000." >> card.cmd\n') frun.write( '%s/run fccrun.py config.py --delphescard=card.tcl --inputfile=card.cmd --outputfile=events%s.root --nevents=%i\n' % (self.para.fccsw, uid, self.events)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py events%s.root %s\n' % (uid, outfile)) frun.write('cd ..\n') frun.write('rm -rf job%s_%s\n' % (uid, self.process)) cmdBatch = "bsub -M 2000000 -R \"pool=20000\" -q %s -o %s -cwd %s %s" % ( self.queue, logdir + '/job%s/' % (uid), logdir + '/job%s/' % (uid), frunfull) batchid = -1 job, batchid = ut.SubmitToLsf(cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job print 'succesfully sent %i jobs' % nbjobsSub
class send_lhep8(): #__________________________________________________________ def __init__(self, njobs, events, process, islsf, queue, para, version, decay): self.njobs = njobs self.events = -1 self.process = process self.islsf = islsf self.queue = queue self.para = para self.version = version self.decay = decay self.user = os.environ['USER'] #__________________________________________________________ def send(self): Dir = os.getcwd() gplist = self.para.gridpacklist outdir = '%s%s/' % (self.para.delphes_dir, self.version) try: gplist[self.process] except KeyError, e: print 'process %s does not exist as gridpack' % self.process sys.exit(3) delphescards_mmr = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_mmr) if ut.file_exist( delphescards_mmr ) == False and self.version != 'cms' and 'helhc' not in self.version: print 'delphes card does not exist: ', delphescards_mmr sys.exit(3) delphescards_mr = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_mr) if ut.file_exist( delphescards_mr ) == False and self.version != 'cms' and 'helhc' not in self.version: print 'delphes card does not exist: ', delphescards_mr sys.exit(3) delphescards_base = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_base) if ut.file_exist(delphescards_base) == False: print 'delphes card does not exist: ', delphescards_base sys.exit(3) fccconfig = '%s%s' % (self.para.fccconfig_dir, self.para.fccconfig) if ut.file_exist(fccconfig) == False: print 'fcc config file does not exist: ', fccconfig sys.exit(3) print '======================================', self.process pythiacard = '%s%s.cmd' % ( self.para.pythiacards_dir, self.process.replace( 'mg_pp', 'p8_pp').replace('mg_gg', 'p8_gg')) if self.decay != '': pythiacard = '%s%s_%s.cmd' % ( self.para.pythiacards_dir, self.process.replace('mg_pp', 'p8_pp').replace( 'mg_gg', 'p8_gg'), self.decay) if ut.file_exist(pythiacard) == False: print 'pythia card does not exist: ', pythiacard timeout = 60 print "do you want to use the default pythia card [y/n] (60sec to reply)" rlist, _, _ = select([sys.stdin], [], [], timeout) if rlist: s = sys.stdin.readline() if s == "y\n": print 'use default card' pythiacard = '%sp8_pp_default.cmd' % ( self.para.pythiacards_dir) else: print 'exit' sys.exit(3) else: print "timeout, use default card" pythiacard = '%sp8_pp_default.cmd' % ( self.para.pythiacards_dir) pr_noht = '' if '_HT_' in self.process: ssplit = self.process.split('_') stest = '' for s in xrange(0, len(ssplit) - 3): stest += ssplit[s] + '_' pr_noht = stest[0:len(stest) - 1] #check that the specified decay exists if self.process in self.para.decaylist and self.decay != '' and '_HT_' not in self.process: if self.decay not in self.para.decaylist[self.process]: print 'decay ==%s== does not exist for process ==%s==' % ( self.decay, self.process) sys.exit(3) #check that the specified decay exists if pr_noht in self.para.decaylist and self.decay != '' and '_HT_' in self.process: if self.decay not in self.para.decaylist[pr_noht]: print 'decay ==%s== does not exist for process ==%s==' % ( self.decay, self.process) sys.exit(3) pr_decay = self.process if self.decay != '': pr_decay = self.process + '_' + self.decay print '====', pr_decay, '====' processp8 = pr_decay.replace('mg_pp', 'mgp8_pp').replace('mg_gg', 'mgp8_gg') logdir = Dir + "/BatchOutputs/%s/%s/" % (self.version, processp8) if not ut.dir_exist(logdir): os.system("mkdir -p %s" % logdir) yamldir = '%s/%s/%s' % (self.para.yamldir, self.version, processp8) if not ut.dir_exist(yamldir): os.system("mkdir -p %s" % yamldir) yamllhedir = '%s/lhe/%s' % (self.para.yamldir, self.process) All_files = glob.glob("%s/events_*.yaml" % yamllhedir) if len(All_files) == 0: print 'there is no LHE files checked for process %s exit' % self.process sys.exit(3) if len(All_files) < self.njobs: print 'only %i LHE file exists, will not run all the jobs requested' % len( All_files) nbjobsSub = 0 ntmp = 0 for i in xrange(len(All_files)): if nbjobsSub == self.njobs: break tmpf = None with open(All_files[i], 'r') as stream: try: tmpf = yaml.load(stream) if tmpf['processing']['status'] != 'DONE': continue except yaml.YAMLError as exc: print(exc) jobid = tmpf['processing']['jobid'] myyaml = my.makeyaml(yamldir, jobid) if not myyaml: print 'job %s already exists' % jobid continue outfile = '%s/%s/events_%s.root' % (outdir, processp8, jobid) if ut.file_exist(outfile): print 'outfile already exist, continue ', outfile frunname = 'job%s.sh' % (jobid) frunfull = '%s/%s' % (logdir, frunname) frun = None try: frun = open(frunfull, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun = open(frunfull, 'w') commands.getstatusoutput('chmod 777 %s' % (frunfull)) frun.write('#!/bin/bash\n') frun.write('unset LD_LIBRARY_PATH\n') frun.write('unset PYTHONHOME\n') frun.write('unset PYTHONPATH\n') frun.write('source %s\n' % (self.para.stack)) frun.write('mkdir job%s_%s\n' % (jobid, processp8)) frun.write('cd job%s_%s\n' % (jobid, processp8)) frun.write('export EOS_MGM_URL=\"root://eospublic.cern.ch\"\n') frun.write('mkdir -p %s%s/%s\n' % (self.para.delphes_dir, self.version, processp8)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (tmpf['processing']['out'])) frun.write('gunzip -c %s > events.lhe\n' % tmpf['processing']['out'].split('/')[-1]) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_base)) if 'fcc' in self.version: frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_mmr)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_mr)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s config.py \n' % (fccconfig)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s card.cmd\n' % (pythiacard)) frun.write('echo "Beams:LHEF = events.lhe" >> card.cmd\n') if 'helhc' in self.version: frun.write('echo " Beams:eCM = 27000." >> card.cmd\n') frun.write( '%s/run fccrun.py config.py --delphescard=card.tcl --inputfile=card.cmd --outputfile=events_%s.root --nevents=%i\n' % (self.para.fccsw, jobid, self.events)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py events_%s.root %s\n' % (jobid, outfile)) frun.write('cd ..\n') frun.write('rm -rf job%s_%s\n' % (jobid, processp8)) cmdBatch = "bsub -M 2000000 -R \"rusage[pool=2000]\" -q %s -cwd%s %s" % ( self.queue, logdir, frunfull) batchid = -1 job, batchid = ut.SubmitToLsf(cmdBatch, 10) nbjobsSub += job print 'succesfully sent %i jobs' % nbjobsSub
def send(self): Dir = os.getcwd() nbjobsSub = 0 # output dir outdir = self.para.lhe_dir logdir = Dir + "/BatchOutputs/lhe/%s" % (self.procname) if not ut.dir_exist(logdir): os.system("mkdir -p %s" % logdir) yamldir = '%s/lhe/%s' % (self.para.yamldir, self.procname) if not ut.dir_exist(yamldir): os.system("mkdir -p %s" % yamldir) outdir = os.path.abspath(outdir) mg5card = os.path.abspath(self.mg5card) cuts = os.path.abspath(self.cutfile) model = os.path.abspath(self.model) jobsdir = './BatchOutputs/lhe/' + self.procname if not os.path.exists(jobsdir): os.makedirs(jobsdir) os.makedirs(jobsdir + '/std/') os.makedirs(jobsdir + '/cfg/') while nbjobsSub < self.njobs: #uid = int(ut.getuid(self.user)) uid = ut.getuid2(self.user) myyaml = my.makeyaml(yamldir, uid) if not myyaml: print 'job %s already exists' % uid continue if ut.file_exist('%s/%s/events_%s.lhe.gz' % (outdir, self.procname, uid)): print 'already exist, continue' continue print 'Submitting job ' + str(nbjobsSub) + ' out of ' + str( self.njobs) seed = str(uid) basename = self.procname + '_' + seed cwd = os.getcwd() script = cwd + '/bin/submitMG.sh ' cmdBatch = 'bsub -o ' + jobsdir + '/std/' + basename + '.out -e ' + jobsdir + '/std/' + basename + '.err -q ' + self.queue cmdBatch += ' -R "rusage[mem={}:pool={}]"'.format( self.memory, self.disk) cmdBatch += ' -J ' + basename + ' "' + script + mg5card + ' ' + self.procname + ' ' + outdir + ' ' + seed + ' ' + str( self.nev) + ' ' + cuts + ' ' + model + '"' print cmdBatch batchid = -1 job, batchid = ut.SubmitToLsf(cmdBatch, 10) nbjobsSub += job print 'succesfully sent %i jobs' % nbjobsSub
def send(self): Dir = os.getcwd() nbjobsSub = 0 # output dir outdir = self.para.lhe_dir acctype = 'FCC' if 'HELHC' in self.para.module_name: acctype = 'HELHC' elif 'FCCee' in self.para.module_name: acctype = 'FCCee' logdir = Dir + "/BatchOutputs/%s/lhe/%s" % (acctype, self.procname) if not ut.dir_exist(logdir): os.system("mkdir -p %s" % logdir) yamldir = '%s/lhe/%s' % (self.para.yamldir, self.procname) if not ut.dir_exist(yamldir): os.system("mkdir -p %s" % yamldir) outdir = os.path.abspath(outdir) mg5card = os.path.abspath(self.mg5card) cuts = os.path.abspath(self.cutfile) model = os.path.abspath(self.model) jobsdir = './BatchOutputs/%s/lhe/%s/' % (acctype, self.procname) if not os.path.exists(jobsdir): os.makedirs(jobsdir) os.makedirs(jobsdir + '/std/') os.makedirs(jobsdir + '/cfg/') if self.islsf == False and self.iscondor == False: print "Submit issue : LSF nor CONDOR flag defined !!!" sys.exit(3) condor_file_params_str = [] while nbjobsSub < self.njobs: #uid = int(ut.getuid(self.user)) uid = ut.getuid2(self.user) myyaml = my.makeyaml(yamldir, uid) if not myyaml: print 'job %s already exists' % uid continue if ut.file_exist('%s/%s/events_%s.lhe.gz' % (outdir, self.procname, uid)): print 'already exist, continue' continue print 'Submitting job ' + str(nbjobsSub) + ' out of ' + str( self.njobs) seed = str(uid) basename = self.procname + '_' + seed cwd = os.getcwd() script = cwd + '/bin/submitMG.sh ' if self.islsf == True: cmdBatch = 'bsub -o ' + jobsdir + '/std/' + basename + '.out -e ' + jobsdir + '/std/' + basename + '.err -q ' + self.queue cmdBatch += ' -R "rusage[mem={}:pool={}]"'.format( self.memory, self.disk) cmdBatch += ' -J ' + basename + ' "' + script + mg5card + ' ' + self.procname + ' ' + outdir + ' ' + seed + ' ' + str( self.nev) + ' ' + cuts + ' ' + model + '"' print cmdBatch batchid = -1 job, batchid = ut.SubmitToLsf(cmdBatch, 10, 1) nbjobsSub += job elif self.iscondor == True: condor_file_params_str.append(mg5card + ' ' + self.procname + ' ' + outdir + ' ' + seed + ' ' + str(self.nev) + ' ' + cuts + ' ' + model) nbjobsSub += 1 if self.iscondor == True: # parameter file fparamname_condor = 'job_params_mglhe.txt' fparamfull_condor = '%s/%s' % (logdir, fparamname_condor) fparam_condor = None try: fparam_condor = open(fparamfull_condor, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) fparam_condor = open(fparamfull_condor, 'w') for line in condor_file_params_str: fparam_condor.write('%s\n' % line) fparam_condor.close() # condor config frunname_condor = 'job_desc_mglhe.cfg' frunfull_condor = '%s/%s' % (logdir, frunname_condor) frun_condor = None try: frun_condor = open(frunfull_condor, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun_condor = open(frunfull_condor, 'w') commands.getstatusoutput('chmod 777 %s' % frunfull_condor) # frun_condor.write('executable = %s\n' % script) frun_condor.write( 'Log = %s/condor_job.%s.$(ClusterId).$(ProcId).log\n' % (logdir, str(uid))) frun_condor.write( 'Output = %s/condor_job.%s.$(ClusterId).$(ProcId).out\n' % (logdir, str(uid))) frun_condor.write( 'Error = %s/condor_job.%s.$(ClusterId).$(ProcId).error\n' % (logdir, str(uid))) frun_condor.write('getenv = True\n') frun_condor.write('environment = "LS_SUBCWD=%s"\n' % logdir) # not sure frun_condor.write('request_memory = %s\n' % self.memory) # frun_condor.write('requirements = ( (OpSysAndVer =?= "CentOS7") && (Machine =!= LastRemoteHost) )\n') frun_condor.write( 'requirements = ( (OpSysAndVer =?= "SLCern6") && (Machine =!= LastRemoteHost) )\n' ) frun_condor.write( 'on_exit_remove = (ExitBySignal == False) && (ExitCode == 0)\n' ) frun_condor.write('max_retries = 3\n') frun_condor.write('+JobFlavour = "%s"\n' % self.queue) frun_condor.write('+AccountingGroup = "group_u_FCC.local_gen"\n') frun_condor.write('queue arguments from %s\n' % fparamfull_condor) frun_condor.close() # nbjobsSub = 0 cmdBatch = "condor_submit %s" % frunfull_condor print cmdBatch job = ut.SubmitToCondor(cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job print 'succesfully sent %i job(s)' % nbjobsSub
class send_p8(): #__________________________________________________________ def __init__(self, njobs, events, process, islsf, iscondor, queue, para, version): self.njobs = njobs self.events = events self.process = process self.islsf = islsf self.iscondor = iscondor self.queue = queue self.user = os.environ['USER'] self.para = para self.version = version #__________________________________________________________ def send(self): Dir = os.getcwd() nbjobsSub = 0 p8list = self.para.pythialist outdir = '%s%s/' % (self.para.delphes_dir, self.version) try: p8list[self.process] except KeyError, e: print 'process %s does not exist, exit' % self.process sys.exit(3) acctype = 'FCC' if 'HELHC' in self.para.module_name: acctype = 'HELHC' logdir = Dir + "/BatchOutputs/%s/%s/%s/" % (acctype, self.version, self.process) if not ut.dir_exist(logdir): os.system("mkdir -p %s" % logdir) yamldir = '%s/%s/%s' % (self.para.yamldir, self.version, self.process) if not ut.dir_exist(yamldir): os.system("mkdir -p %s" % yamldir) delphescards_mmr = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_mmr) if ut.file_exist( delphescards_mmr ) == False and self.version != 'cms' and 'helhc' not in self.version: print 'delphes card does not exist: ', delphescards_mmr, ' , exit' sys.exit(3) delphescards_mr = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_mr) if ut.file_exist( delphescards_mr ) == False and self.version != 'cms' and 'helhc' not in self.version: print 'delphes card does not exist: ', delphescards_mr, ' , exit' sys.exit(3) delphescards_base = '%s%s/%s' % (self.para.delphescards_dir, self.version, self.para.delphescard_base) if ut.file_exist(delphescards_base) == False: print 'delphes card does not exist: ', delphescards_base, ' , exit' sys.exit(3) fccconfig = '%s%s' % (self.para.fccconfig_dir, self.para.fccconfig) if ut.file_exist(fccconfig) == False: print 'fcc config file does not exist: ', fccconfig, ' , exit' sys.exit(3) print '======================================', self.process pythiacard = '%s%s.cmd' % (self.para.pythiacards_dir, self.process) if ut.file_exist(pythiacard) == False: print 'pythia card does not exist: ', pythiacard, ' , exit' sys.exit(3) if self.islsf == False and self.iscondor == False: print "Submit issue : LSF nor CONDOR flag defined !!!" sys.exit(3) condor_file_str = '' while nbjobsSub < self.njobs: uid = ut.getuid2(self.user) myyaml = my.makeyaml(yamldir, uid) if not myyaml: print 'job %s already exists' % uid continue outfile = '%s/%s/events_%s.root' % (outdir, self.process, uid) if ut.file_exist(outfile): print 'file %s already exist, continue' % outfile continue frunname = 'job%s.sh' % (uid) frunfull = '%s/%s' % (logdir, frunname) frun = None try: frun = open(frunfull, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun = open(frunfull, 'w') commands.getstatusoutput('chmod 777 %s' % (frunfull)) frun.write('#!/bin/bash\n') frun.write('unset LD_LIBRARY_PATH\n') frun.write('unset PYTHONHOME\n') frun.write('unset PYTHONPATH\n') frun.write('source %s\n' % (self.para.stack)) frun.write('mkdir job%s_%s\n' % (uid, self.process)) frun.write('cd job%s_%s\n' % (uid, self.process)) frun.write('export EOS_MGM_URL=\"root://eospublic.cern.ch\"\n') frun.write('mkdir -p %s/%s\n' % (outdir, self.process)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_base)) if 'fcc' in self.version: frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_mmr)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s .\n' % (delphescards_mr)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s config.py \n' % (fccconfig)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py %s card.cmd\n' % (pythiacard)) frun.write('echo "" >> card.cmd\n') frun.write('echo "Random:seed = %s" >> card.cmd\n' % uid) if 'helhc' in self.version: frun.write('echo " Beams:eCM = 27000." >> card.cmd\n') frun.write( '%s/run fccrun.py config.py --delphescard=card.tcl --inputfile=card.cmd --outputfile=events%s.root --nevents=%i\n' % (self.para.fccsw, uid, self.events)) frun.write( 'python /afs/cern.ch/work/h/helsens/public/FCCutils/eoscopy.py events%s.root %s\n' % (uid, outfile)) frun.write('cd ..\n') frun.write('rm -rf job%s_%s\n' % (uid, self.process)) frun.close() if self.islsf == True: cmdBatch = "bsub -M 2000000 -R \"pool=20000\" -q %s -o %s -cwd %s %s" % ( self.queue, logdir + '/job%s/' % (uid), logdir + '/job%s/' % (uid), frunfull) job, batchid = ut.SubmitToLsf( cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) batchid = -1 job, batchid = ut.SubmitToLsf( cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job elif self.iscondor == True: condor_file_str += frunfull + " " nbjobsSub += 1 if self.iscondor == True: # clean string condor_file_str = condor_file_str.replace("//", "/") # frunname_condor = 'job_desc_p8.cfg' frunfull_condor = '%s/%s' % (logdir, frunname_condor) frun_condor = None try: frun_condor = open(frunfull_condor, 'w') except IOError as e: print "I/O error({0}): {1}".format(e.errno, e.strerror) time.sleep(10) frun_condor = open(frunfull_condor, 'w') commands.getstatusoutput('chmod 777 %s' % frunfull_condor) # frun_condor.write('executable = $(filename)\n') frun_condor.write( 'Log = %s/condor_job.%s.$(ClusterId).$(ProcId).log\n' % (logdir, str(uid))) frun_condor.write( 'Output = %s/condor_job.%s.$(ClusterId).$(ProcId).out\n' % (logdir, str(uid))) frun_condor.write( 'Error = %s/condor_job.%s.$(ClusterId).$(ProcId).error\n' % (logdir, str(uid))) frun_condor.write('getenv = True\n') frun_condor.write('environment = "LS_SUBCWD=%s"\n' % logdir) # not sure frun_condor.write('request_memory = 2G\n') # frun_condor.write('requirements = ( (OpSysAndVer =?= "CentOS7") && (Machine =!= LastRemoteHost) )\n') frun_condor.write( 'requirements = ( (OpSysAndVer =?= "SLCern6") && (Machine =!= LastRemoteHost) )\n' ) frun_condor.write( 'on_exit_remove = (ExitBySignal == False) && (ExitCode == 0)\n' ) frun_condor.write('max_retries = 3\n') frun_condor.write('+JobFlavour = "%s"\n' % self.queue) frun_condor.write('+AccountingGroup = "group_u_FCC.local_gen"\n') frun_condor.write('queue filename matching files %s\n' % condor_file_str) frun_condor.close() # nbjobsSub = 0 cmdBatch = "condor_submit %s" % frunfull_condor print cmdBatch job = ut.SubmitToCondor(cmdBatch, 10, "%i/%i" % (nbjobsSub, self.njobs)) nbjobsSub += job print 'succesfully sent %i job(s)' % nbjobsSub