if __name__ == '__main__': ''' aligment = [ "XTQNPQWLWQEVLQEQQLSRPTYETTT", "MTQNPQWLWQEVLTKLRPTYET", #"MTQNPQWLLSRPTYET", "MTQNPQWLWQEVLTKLERPTYET", "MTQNPQWLWQEVLTKLEQQLSRPTYET", "MTQNPQWLWQEVLTKLEQQSRPTYET", "MTQNPQWLWQQLSRPTYET", "CTQNPQWLWQEVLQEQQLSRPTYETTT" ] ''' files = Files() files.open("input.fasta") nj = NeighborJoining(files.getLabels(), files.getSequencias()) #nj.execute() #print(files.getSequencias()) #print(files.getLabels()) saga = Saga(population_size=20, num_generations=100) print("Parameters:") print("Polulation size = 20") print("um generations = 100") print(files.getSequencias()) print() saga.execute(files.getSequencias()) print("Fim execução!!")
#!/usr/bin/env python3 # -*- coding: utf-8 -* from NeighbourJoining import NeighbourJoining from Files import Files if __name__ == '__main__': files = Files() files.open("arq.fasta") nj = NeighbourJoining(files.getLabels(), files.getSequencias()) nj.execute() print("Fim de execução!!")