class WhizardAnalysis(ModuleBase):
"""
Specific Module to run a Whizard job.
"""
def __init__(self):
super(WhizardAnalysis, self).__init__()
self.enable = True
self.STEP_NUMBER = ''
self.debug = True
self.SteeringFile = ''
self.OutputFile = ''
self.NumberOfEvents = 1
self.Lumi = 0
self.applicationName = 'whizard'
self.evttype = ""
self.RandomSeed = 0
self.getProcessInFile = False
self.datMan = DataManager()
self.processlist = None
self.parameters = {}
self.susymodel = 0
self.Model = ''
self.genmodel = GeneratorModels()
self.eventstring = ['! ', 'Fatal error:', 'PYSTOP', 'No matrix element available',
'Floating point exception', 'Event generation finished.', " n_events","luminosity",
" sum "]
self.excludeAllButEventString = False
self.steeringparameters = ''
self.options = None
self.optionsdict = {}
self.OptionsDictStr = ''
self.GenLevelCutDictStr = ''
self.genlevelcuts = {}
self.willCut = False
self.useGridFiles = False
def obtainProcessList(self):
"""Internal function
Get the process list from storage if whizard.in was not provided
:return: S_OK(), S_ERROR()
"""
res = self.ops.getValue("/ProcessList/Location", "")
if not res:
return S_ERROR("No process list found")
processlistloc = res
if not os.path.exists(os.path.basename(processlistloc)):
res = self.datMan.getFile(processlistloc)
if not res['OK']:
LOG.error('Could not get processlist: %s' % res['Message'])
return res
self.processlist = ProcessList(os.path.basename(processlistloc))
return S_OK()
def applicationSpecificInputs(self):
"""Resolve module input
:return: S_OK()
"""
self.parameters['ENERGY'] = self.energy
if not self.RandomSeed and self.jobID:
self.RandomSeed = self.jobID
if 'IS_PROD' in self.workflow_commons or 'IS_DBD_GEN_PROD' in self.workflow_commons:
self.RandomSeed = int(str(int(self.workflow_commons["PRODUCTION_ID"])) + str(int(self.workflow_commons["JOB_ID"])))
self.parameters['SEED'] = self.RandomSeed
self.parameters['NBEVTS'] = self.NumberOfEvents
self.parameters['LUMI'] = self.Lumi
##EVER USED???
if 'SusyModel' in self.step_commons:
self.susymodel = self.step_commons['SusyModel']
self.SteeringFile = os.path.basename(self.step_commons.get("InputFile", self.SteeringFile))
if self.SteeringFile == "whizard.in":
os.rename(self.SteeringFile, "whizardnew.in")
self.SteeringFile = "whizardnew.in"
self.parameters['PROCESS'] = self.evttype
listofparams = self.steeringparameters.split(";")
for param in listofparams:
if param.count("="):
self.parameters[param.split("=")[0]] = param.split("=")[1]
if self.OptionsDictStr:
LOG.info("Will use whizard.in definition from WhizardOptions.")
try:
self.optionsdict = eval(self.OptionsDictStr)
if 'integration_input' not in self.optionsdict:
self.optionsdict['integration_input'] = {}
if 'seed' not in self.optionsdict['integration_input']:
self.optionsdict['integration_input']['seed'] = int(self.RandomSeed)
if 'process_input' in self.optionsdict:
if 'sqrts' in self.optionsdict['process_input']:
self.energy = self.optionsdict['process_input']['sqrts']
except:
return S_ERROR("Could not convert string to dictionary for optionsdict")
if self.GenLevelCutDictStr:
LOG.info("Found generator level cuts")
try:
self.genlevelcuts = eval(self.GenLevelCutDictStr)
except:
return S_ERROR("Could not convert the generator level cuts back to dictionary")
if not len(self.SteeringFile) and not self.optionsdict:
self.getProcessInFile = True
if "IS_PROD" in self.workflow_commons:
if self.workflow_commons["IS_PROD"] and not self.willCut:
#self.OutputFile = getProdFilename(self.OutputFile,int(self.workflow_commons["PRODUCTION_ID"]),
# int(self.workflow_commons["JOB_ID"]))
if 'ProductionOutputData' in self.workflow_commons:
outputlist = self.workflow_commons['ProductionOutputData'].split(";")
for obj in outputlist:
if obj.lower().count("_gen_"):
self.OutputFile = os.path.basename(obj)
break
else:
#This is because most likely there is stdhepcut running after
self.OutputFile = "willcut.stdhep"
#getProdFilename(self.OutputFile,int(self.workflow_commons["PRODUCTION_ID"]),
# int(self.workflow_commons["JOB_ID"]))
if "IS_DBD_GEN_PROD" in self.workflow_commons and self.workflow_commons["IS_DBD_GEN_PROD"]:
#self.OutputFile = getProdFilename(self.OutputFile,int(self.workflow_commons["PRODUCTION_ID"]),
# int(self.workflow_commons["JOB_ID"]))
if 'ProductionOutputData' in self.workflow_commons:
outputlist = self.workflow_commons['ProductionOutputData'].split(";")
for obj in outputlist:
self.OutputFile = os.path.basename(obj)
break
else:
self.OutputFile = getProdFilename(self.OutputFile, int(self.workflow_commons["PRODUCTION_ID"]),
int(self.workflow_commons["JOB_ID"]))
return S_OK()
def runIt(self):
""" Called by Agent
Executes the following
- resolve input variables
- resolve installation location
- resolve dependencies location (beam_spectra)
- get processlist if needed
- define output file name
- prepare whizard.in
- make magic
:return: S_OK(), S_ERROR()
"""
self.result = S_OK()
if not self.platform:
self.result = S_ERROR( 'No ILC platform selected' )
elif not self.applicationLog:
self.result = S_ERROR( 'No Log file provided' )
if not self.result['OK']:
LOG.error("Failed to resolve input parameters:", self.result["Message"])
return self.result
if not self.workflowStatus['OK'] or not self.stepStatus['OK']:
LOG.verbose('Workflow status = %s, step status = %s' % (self.workflowStatus['OK'], self.stepStatus['OK']))
return S_OK('Whizard should not proceed as previous step did not end properly')
#if self.debug:
# self.excludeAllButEventString = False
res = getSoftwareFolder(self.platform, self.applicationName, self.applicationVersion)
if not res['OK']:
LOG.error("Failed getting software folder", res['Message'])
self.setApplicationStatus('Failed finding software')
return res
mySoftDir = res['Value']
###Remove libc
removeLibc(mySoftDir + "/lib")
##Need to fetch the new LD_LIBRARY_PATH
new_ld_lib_path = getNewLDLibs(self.platform, self.applicationName, self.applicationVersion)
#Don't forget to prepend the application's libs
new_ld_lib_path = mySoftDir + "/lib:" + new_ld_lib_path
### Resolve dependencies (look for beam_spectra)
deps = resolveDeps(self.platform, self.applicationName, self.applicationVersion)
path_to_beam_spectra = ""
path_to_gridfiles = ""
for dep in deps:
res = getSoftwareFolder(self.platform, dep[ "app" ], dep['version'])
if not res['OK']:
LOG.error("Failed getting software folder", res['Message'])
self.setApplicationStatus('Failed finding software')
return res
depfolder = res['Value']
if dep["app"] == "beam_spectra":
path_to_beam_spectra = depfolder
elif dep["app"] == "gridfiles":
path_to_gridfiles = depfolder
##Env variables needed to run whizard: avoids hard coded locations
os.environ['LUMI_LINKER'] = path_to_beam_spectra + "/lumi_linker_000"
os.environ['PHOTONS_B1'] = path_to_beam_spectra + "/photons_beam1_linker_000"
os.environ['PHOTONS_B2'] = path_to_beam_spectra + "/photons_beam2_linker_000"
os.environ['EBEAM'] = path_to_beam_spectra + "/ebeam_in_linker_000"
os.environ['PBEAM'] = path_to_beam_spectra + "/pbeam_in_linker_000"
os.environ['LUMI_EE_LINKER'] = path_to_beam_spectra + "/lumi_ee_linker_000"
os.environ['LUMI_EG_LINKER'] = path_to_beam_spectra + "/lumi_eg_linker_000"
os.environ['LUMI_GE_LINKER'] = path_to_beam_spectra + "/lumi_ge_linker_000"
os.environ['LUMI_GG_LINKER'] = path_to_beam_spectra + "/lumi_gg_linker_000"
list_of_gridfiles = []
if path_to_gridfiles and self.useGridFiles:
tmp_list_of_gridfiles = [os.path.join(path_to_gridfiles, item) for item in os.listdir(path_to_gridfiles)]
gridfilesfound = False
for path in tmp_list_of_gridfiles:
if os.path.isdir(path) and path.count(str(self.energy)):
#Here look for a sub directory for the energy related grid files
list_of_gridfiles = [os.path.join(path, item) for item in os.listdir(path)]
gridfilesfound = True
LOG.info('Found grid files specific for energy %s' % self.energy)
break
if not gridfilesfound:
LOG.info("Will use generic grid files found, hope the energy is set right")
list_of_gridfiles = [item for item in glob.glob(os.path.join(path_to_gridfiles, "*.grb")) + glob.glob(os.path.join(path_to_gridfiles, "*.grc"))]
template = False
if self.SteeringFile.count("template"):
template = True
## Get from process file the proper whizard.in file
if self.getProcessInFile:
whizardin = ""
res = self.obtainProcessList()
if not res['OK']:
LOG.error("Could not obtain process list")
self.setApplicationStatus('Failed getting processlist')
return res
whizardin = self.processlist.getInFile(self.evttype)
if not whizardin:
LOG.error("Whizard input file was not found in process list, cannot proceed")
self.setApplicationStatus('Whizard input file was not found')
return S_ERROR("Error while resolving whizard input file")
if whizardin.count("template"):
template = True
try:
shutil.copy("%s/%s" % (mySoftDir, whizardin), "./whizardnew.in")
self.SteeringFile = "whizardnew.in"
except EnvironmentError:
LOG.error("Could not copy %s from %s" % (whizardin, mySoftDir))
self.setApplicationStatus('Failed getting whizard.in file')
return S_ERROR("Failed to obtain %s" % whizardin)
##Check existence of Les Houches input file
leshouchesfiles = ''
if not os.path.exists("LesHouches.msugra_1.in"):
if self.susymodel:
if self.susymodel == 1:
if os.path.exists("%s/LesHouches_slsqhh.msugra_1.in" % (mySoftDir)):
leshouchesfiles = "%s/LesHouches_slsqhh.msugra_1.in" % (mySoftDir)
if self.susymodel == 2:
if os.path.exists("%s/LesHouches_chne.msugra_1.in" % (mySoftDir)):
leshouchesfiles = "%s/LesHouches_chne.msugra_1.in" % (mySoftDir)
if self.Model:
if self.genmodel.hasModel(self.Model)['OK']:
if self.genmodel.getFile(self.Model)['OK']:
if os.path.exists("%s/%s" % (mySoftDir, self.genmodel.getFile(self.Model)['Value'])):
leshouchesfiles = "%s/%s" % (mySoftDir, self.genmodel.getFile(self.Model)['Value'])
else:
LOG.error("Request LesHouches file is missing, cannot proceed")
self.setApplicationStatus("LesHouches file missing")
return S_ERROR("The LesHouches file was not found. Probably you are using a wrong version of whizard.")
else:
LOG.warn("No file found attached to model %s" % self.Model)
else:
LOG.error("Model undefined:", self.Model)
self.setApplicationStatus("Model undefined")
return S_ERROR("No Model %s defined" % self.Model)
else:
leshouchesfiles = "LesHouches.msugra_1.in"
outputfilename = self.evttype
if self.optionsdict:
LOG.info("Using: %s" % self.optionsdict)
self.options = WhizardOptions(self.Model)
res = self.options.changeAndReturn(self.optionsdict)
if not res['OK']:
return res
res = self.options.toWhizardDotIn("whizard.in")
elif not template:
res = prepareWhizardFile(self.SteeringFile, outputfilename, self.energy,
self.RandomSeed, self.NumberOfEvents, self.Lumi,
"whizard.in")
else:
res = prepareWhizardFileTemplate(self.SteeringFile, outputfilename,
self.parameters, "whizard.in")
if not res['OK']:
LOG.error('Something went wrong with input file generation')
self.setApplicationStatus('Whizard: something went wrong with input file generation')
return S_ERROR('Something went wrong with whizard.in file generation')
foundproceesinwhizardin = res['Value']
scriptName = 'Whizard_%s_Run_%s.sh' % (self.applicationVersion, self.STEP_NUMBER)
if os.path.exists(scriptName):
os.remove(scriptName)
script = open(scriptName, 'w')
script.write('#!/bin/sh \n')
script.write('#####################################################################\n')
script.write('# Dynamically generated script to run a production or analysis job. #\n')
script.write('#####################################################################\n')
script.write('declare -x PATH=%s:$PATH\n' % mySoftDir)
script.write('declare -x LD_LIBRARY_PATH=%s\n' % new_ld_lib_path)
script.write('env | sort >> localEnv.log\n')
script.write('echo =============================\n')
script.write('echo Printing content of whizard.in \n')
script.write('cat whizard.in\n')
script.write('echo =============================\n')
script.write('cp %s/whizard.mdl ./\n' % mySoftDir)
if leshouchesfiles:
if not leshouchesfiles == 'LesHouches.msugra_1.in':
script.write('cp %s ./LesHouches.msugra_1.in\n' % (leshouchesfiles))
script.write('ln -s LesHouches.msugra_1.in fort.71\n')
if len(list_of_gridfiles):
for gridfile in list_of_gridfiles:
script.write('cp %s ./\n' % (gridfile))
script.write('cp %s/whizard.prc ./\n' % mySoftDir)
if self.genlevelcuts:
res = self.makeWhizardDotCut1()
if not res['OK']:
script.close()
LOG.error("Could not create the cut1 file")
return S_ERROR("Could not create the cut1 file")
script.write('echo =============================\n')
script.write('echo Printing content of whizard.prc \n')
script.write('cat whizard.prc\n')
script.write('echo =============================\n')
extracmd = ""
if not self.debug:
extracmd = "2>/dev/null"
comm = ""
if foundproceesinwhizardin:
comm = 'whizard --simulation_input \'write_events_file = \"%s\"\'' % (outputfilename)
else:
comm = 'whizard --process_input \'process_id =\"%s\"\' --simulation_input \'write_events_file = \"%s\"\' ' % (self.evttype,
outputfilename)
comm = "%s %s %s\n" % (comm, self.extraCLIarguments, extracmd)
LOG.info("Will run %s" % comm)
script.write(comm)
script.write('declare -x appstatus=$?\n')
script.write('exit $appstatus\n')
script.close()
if os.path.exists(self.applicationLog):
os.remove(self.applicationLog)
os.chmod(scriptName, 0o755)
comm = 'sh -c "./%s"' % (scriptName)
self.setApplicationStatus('Whizard %s step %s' %(self.applicationVersion, self.STEP_NUMBER))
self.stdError = ''
self.result = shellCall(0, comm, callbackFunction = self.redirectLogOutput, bufferLimit=209715200)
#self.result = {'OK':True,'Value':(0,'Disabled Execution','')}
if not self.result['OK']:
LOG.error("Failed with error %s" % self.result['Message'])
if not os.path.exists(self.applicationLog):
LOG.error("Something went terribly wrong, the log file is not present")
self.setApplicationStatus('%s failed terribly, you are doomed!' % (self.applicationName))
if not self.ignoreapperrors:
return S_ERROR('%s did not produce the expected log' % (self.applicationName))
lumi = ''
message = ""
success = False
###Analyse log file
with open(self.applicationLog) as logfile:
for line in logfile:
if line.count('! Event sample corresponds to luminosity'):
elems = line.split()
lumi = elems[-1]
if line.count("*** Fatal error:"):
status = 1
message = line
break
elif line.count("PYSTOP"):
status = 1
message = line
break
elif line.count("No matrix element available"):
status = 1
message = line
break
elif line.count("Floating point exception"):
status = 1
message = line
break
elif line.count("Event generation finished."):
success = True
else:
status = 0
if success:
status = 0
else:
status = 1
LOG.info('The sample generated has an equivalent luminosity of %s' % lumi)
if lumi:
self.workflow_commons['Luminosity'] = float(lumi)
else:
status = 1
##Now care for the cross sections
info = {}
res = self.options.getAsDict()
if os.path.exists("whizard.out") and res['OK']:
full_opts_dict = res['Value']
processes = full_opts_dict['process_input']['process_id'].split()
info = {}
info['xsection'] = {}
processes.append('sum')
with open("whizard.out", "r") as inf:
for line in inf:
line = line.rstrip()
for process in processes:
if not process:
continue
if line.count(" %s " % process):
info['xsection'][process] = {}
line = line.lstrip()
crosssection = line.split()[1]
err_crosssection = line.split()[2]
frac = line.split()[4]
info['xsection'][process]['xsection'] = float(crosssection)
info['xsection'][process]['err_xsection'] = float(err_crosssection)
info['xsection'][process]['fraction'] = float(frac)
if info:
if 'Info' not in self.workflow_commons:
self.workflow_commons['Info'] = info
else:
self.workflow_commons['Info'].update(info)
LOG.info("Status after the application execution is %s" % str(status))
messageout = 'Whizard %s Successful' % (self.applicationVersion)
failed = False
if status != 0:
LOG.error("Whizard execution completed with errors:")
failed = True
else:
LOG.info("Whizard execution completed successfully")
###Deal with output file
if len(self.OutputFile):
if os.path.exists(outputfilename + ".001.stdhep"):
LOG.notice("Looking for output files")
ofnames = glob.glob(outputfilename+'*.stdhep')
if len(ofnames) > 1:
basename = self.OutputFile.split(".stdhep")[0]
i = 0
for of in ofnames:
i += 1
name = basename + "_" + str(i) + ".stdhep"
os.rename(of, name)
else:
os.rename(outputfilename + ".001.stdhep", self.OutputFile)
else:
LOG.error("Whizard execution did not produce a stdhep file")
self.setApplicationStatus('Whizard %s Failed to produce STDHEP file' % (self.applicationVersion))
messageout = 'Whizard Failed to produce STDHEP file'
if not self.ignoreapperrors:
return S_ERROR(messageout)
if failed is True:
LOG.error("==================================\n StdError:\n")
LOG.error(message)
self.setApplicationStatus('%s Exited With Status %s' % (self.applicationName, status))
LOG.error('Whizard Exited With Status %s' % (status))
messageout = 'Whizard Exited With Status %s' % (status)
if not self.ignoreapperrors:
return S_ERROR(messageout)
else:
self.setApplicationStatus(messageout)
return S_OK( { "OutputFile": self.OutputFile } )
def makeWhizardDotCut1(self):
""" When users need whizard cuts, this is called to prepare the file
:return: S_OK()
"""
cutf = open("whizard.cut1","w")
for key, values in self.genlevelcuts.items():
cutf.write("process %s\n" % key)
for val in values:
cutf.write(" %s\n" % val)
cutf.close()
return S_OK()
class ProcessListComplexTestCase(unittest.TestCase):
""" Test the different methods of the class, providing a usable CFG
"""
def setUp(self):
with patch('%s.os.path.exists' % MODULE_NAME,
new=Mock(return_value=False)):
self.prol = ProcessList('myTestProcess.list')
self.prol.cfg.createNewSection('Processes')
def test_updateproclist_and_getters(self):
self.prol.cfg.createNewSection('Processes/myTestProcDeleteMe')
self.prol.cfg.setOption(
'Processes/myTestProcDeleteMe/someRandomOption', True)
dict_1 = {'CrossSection': 'someCross'}
dict_1.update(STD_PROC_DICT)
dict_2 = {'CrossSection': 'some_other_val'}
dict_2.update(STD_PROC_DICT)
process_dict = {}
process_dict['MytestProcess'] = dict_1
process_dict['myTestProcDeleteMe'] = dict_2
result = self.prol.updateProcessList(process_dict)
assertDiracSucceeds(result, self)
conf = self.prol.cfg
self.assertFalse(
conf.existsKey('Processes/myTestProcDeleteMe/someRandomOption'))
options = [
'Processes/MytestProcess/CrossSection',
'Processes/myTestProcDeleteMe/CrossSection'
]
assertEqualsImproved((map(conf.getOption, options)),
(['someCross', 'some_other_val']), self)
assertEqualsImproved(
(self.prol.getCSPath('myTestProcDeleteMe'),
self.prol.getInFile('myTestProcDeleteMe'),
self.prol.existsProcess('myTestProcDeleteMe'),
self.prol.existsProcess(''),
self.prol.existsProcess('invalidProcess'),
self.prol.existsProcess('myTestProcDeleteMeToo')),
('/test/cs/path/ball.tar', 'my/file.in', S_OK(True), S_OK(True),
S_OK(False), S_OK(False)), self)
assertListContentEquals(self.prol.getProcesses(),
['myTestProcDeleteMe', 'MytestProcess'], self)
all_processes_dict = self.prol.getProcessesDict()
assertEqualsImproved(len(all_processes_dict), 2, self)
assertEqualsImproved(
('myTestProcDeleteMe' in all_processes_dict, 'MytestProcess'
in all_processes_dict), (True, True), self)
self.prol.printProcesses()
def test_writeproclist(self):
expected_write = 'Processes\n{\n mytestprocess123\n {\n TarBallCSPath = /test/cs/path/bal.tarr\n Detail = TestNoDetails\n Generator = mytestGen21\n Model = testmodel3001\n Restrictions = \n InFile = my/file.in\n CrossSection = 0\n }\n}\n'
self.prol._addEntry(
'mytestprocess123', {
'TarBallCSPath': '/test/cs/path/bal.tarr',
'Detail': 'TestNoDetails',
'Generator': 'mytestGen21',
'Model': 'testmodel3001',
'Restrictions': '',
'InFile': 'my/file.in'
})
exists_dict = {
'/temp/dir': False,
'/temp/dir/mytempfile.txt': True,
'/my/folder/testpath.xml': True
}
fhandle_mock = Mock()
with patch('tempfile.mkstemp', new=Mock(return_value=('handle', '/temp/dir/mytempfile.txt'))), \
patch('__builtin__.file', new=Mock(return_value=fhandle_mock)) as file_mock, \
patch('os.makedirs') as mkdir_mock, \
patch('os.path.exists', new=Mock(side_effect=lambda path: exists_dict[path])), \
patch('shutil.move') as move_mock, \
patch('os.close') as close_mock:
assertDiracSucceedsWith_equals(
self.prol.writeProcessList('/my/folder/testpath.xml'),
'/my/folder/testpath.xml', self)
mkdir_mock.assert_called_once_with('/temp/dir')
file_mock.assert_called_once_with('/temp/dir/mytempfile.txt', 'w')
fhandle_mock.write.assert_called_once_with(expected_write)
close_mock.assert_called_once_with('handle')
move_mock.assert_called_once_with('/temp/dir/mytempfile.txt',
'/my/folder/testpath.xml')
def test_writeproclist_notwritten(self):
exists_dict = {'myTmpNameTestme': True}
cfg_mock = Mock()
cfg_mock.writeToFile.return_value = False
self.prol.cfg = cfg_mock
self.prol.location = '/my/folder/testpath2.txt'
with patch('os.close') as close_mock, \
patch('os.path.exists', new=Mock(side_effect=lambda path: exists_dict[path])), \
patch('os.remove') as remove_mock, \
patch('tempfile.mkstemp', new=Mock(return_value=('myhandle', 'myTmpNameTestme'))):
assertDiracFailsWith(self.prol.writeProcessList(),
'failed to write repo', self)
close_mock.assert_called_once_with('myhandle')
remove_mock.assert_called_once_with('myTmpNameTestme')
def test_writeproclist_notwritten_noremove(self):
exists_dict = {'myTmpNameTestme': False}
cfg_mock = Mock()
cfg_mock.writeToFile.return_value = False
self.prol.cfg = cfg_mock
with patch('os.close') as close_mock, \
patch('os.path.exists', new=Mock(side_effect=lambda path: exists_dict[path])), \
patch('os.remove') as remove_mock, \
patch('tempfile.mkstemp', new=Mock(return_value=('myhandle', 'myTmpNameTestme'))):
assertDiracFailsWith(
self.prol.writeProcessList('/my/folder/testpath2.txt'),
'failed to write repo', self)
close_mock.assert_called_once_with('myhandle')
self.assertFalse(remove_mock.called)
def test_writeproclist_move_fails(self):
exists_dict = {'/my/folder/testpath2.txt': False}
cfg_mock = Mock()
cfg_mock.writeToFile.return_value = True
self.prol.cfg = cfg_mock
with patch('os.close') as close_mock, \
patch('os.path.exists', new=Mock(side_effect=lambda path: exists_dict[path])), \
patch('os.remove') as remove_mock, \
patch('tempfile.mkstemp', new=Mock(return_value=('myhandle', 'myTmpNameTestme'))), \
patch('shutil.move', new=Mock(side_effect=OSError('mytestErr_os'))):
assertDiracFailsWith(
self.prol.writeProcessList('/my/folder/testpath2.txt'),
'failed to write repo', self)
close_mock.assert_called_once_with('myhandle')
self.assertFalse(remove_mock.called)
def test_uploadproclist(self):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_OK('something')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
fileutil_mock.upload.return_value = S_OK('something')
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK('/local/path/proc.list')
mocked_modules = {
'DIRAC.DataManagementSystem.Client.DataManager': datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils': fileutil_mock
}
module_patcher = patch.dict(sys.modules, mocked_modules)
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
with patch('shutil.copy') as copy_mock, \
patch('subprocess.call') as proc_mock:
self.prol.uploadProcessListToFileCatalog(
'/my/secret/path/processlist.whiz', 'v120')
assertMockCalls(
copy_mock,
[('myTestProcess.list',
'/afs/cern.ch/eng/clic/software/whizard/whizard_195/'),
('myTestProcess.list', '/local/path/proc.list')], self)
proc_mock.assert_called_once_with([
'svn', 'ci',
'/afs/cern.ch/eng/clic/software/whizard/whizard_195/proc.list',
"-m'Process list for whizard version v120'"
],
shell=False)
DIRAC.gConfig = backup_conf
module_patcher.stop()
def test_uploadproclist_remove_fails(self):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_ERROR('my_test_err')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK('somepath')
mocked_modules = {
'DIRAC.DataManagementSystem.Client.DataManager': datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils': fileutil_mock
}
module_patcher = patch.dict(sys.modules, mocked_modules)
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
DIRAC.exit = abort_test
with self.assertRaises(KeyboardInterrupt) as ki:
self.prol.uploadProcessListToFileCatalog('asd', 'v1')
key_interrupt = ki.exception
assertEqualsImproved(key_interrupt.args, ('abort_my_test', ), self)
DIRAC.gConfig = backup_conf
module_patcher.stop()
def test_uploadproclist_upload_fails(self):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_OK('something')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
fileutil_mock.upload.return_value = S_ERROR('something')
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK('somepath')
mocked_modules = {
'DIRAC.DataManagementSystem.Client.DataManager': datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils': fileutil_mock
}
module_patcher = patch.dict(sys.modules, mocked_modules)
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
DIRAC.exit = abort_test
with self.assertRaises(KeyboardInterrupt) as ki:
self.prol.uploadProcessListToFileCatalog('asd', 'v1')
key_interrupt = ki.exception
assertEqualsImproved(key_interrupt.args, ('abort_my_test', ), self)
DIRAC.gConfig = backup_conf
module_patcher.stop()
def test_uploadproclist_copy_and_commit_fail(self):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_OK('something')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
fileutil_mock.upload.return_value = S_OK('something')
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK('somepath')
mocked_modules = {
'DIRAC.DataManagementSystem.Client.DataManager': datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils': fileutil_mock
}
module_patcher = patch.dict(sys.modules, mocked_modules)
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
DIRAC.exit = abort_test
with patch('shutil.copy', new=Mock(side_effect=OSError('oserr_testme_keeprunning'))), \
patch('subprocess.call', new=Mock(side_effect=OSError('subproc_test_err'))):
self.prol.uploadProcessListToFileCatalog(
'/my/secret/path/processlist.whiz', 'v120')
DIRAC.gConfig = backup_conf
module_patcher.stop()
def test_uploadproclist_skip_copy(self):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_OK('something')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
fileutil_mock.upload.return_value = S_OK('something')
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK('')
mocked_modules = {
'DIRAC.DataManagementSystem.Client.DataManager': datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils': fileutil_mock
}
module_patcher = patch.dict(sys.modules, mocked_modules)
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
DIRAC.exit = abort_test
with patch('shutil.copy', new=Mock(side_effect=IOError('dont_call_me'))), \
patch('subprocess.call', new=Mock(side_effect=IOError('dont_call_me_either'))):
self.prol.uploadProcessListToFileCatalog(
'/my/secret/path/processlist.whiz', 'v120')
DIRAC.gConfig = backup_conf
module_patcher.stop()
class WhizardAnalysis(ModuleBase):
"""
Specific Module to run a Whizard job.
"""
def __init__(self):
super(WhizardAnalysis, self).__init__()
self.enable = True
self.STEP_NUMBER = ''
self.debug = True
self.log = gLogger.getSubLogger("WhizardAnalysis")
self.SteeringFile = ''
self.OutputFile = ''
self.NumberOfEvents = 1
self.Lumi = 0
self.applicationName = 'whizard'
self.evttype = ""
self.RandomSeed = 0
self.getProcessInFile = False
self.datMan = DataManager()
self.processlist = None
self.parameters = {}
self.susymodel = 0
self.Model = ''
self.genmodel = GeneratorModels()
self.eventstring = [
'! ', 'Fatal error:', 'PYSTOP', 'No matrix element available',
'Floating point exception', 'Event generation finished.',
" n_events", "luminosity", " sum "
]
self.excludeAllButEventString = False
self.steeringparameters = ''
self.options = None
self.optionsdict = {}
self.OptionsDictStr = ''
self.GenLevelCutDictStr = ''
self.genlevelcuts = {}
self.willCut = False
self.useGridFiles = False
def obtainProcessList(self):
"""Internal function
Get the process list from storage if whizard.in was not provided
:return: S_OK(), S_ERROR()
"""
res = self.ops.getValue("/ProcessList/Location", "")
if not res:
return S_ERROR("No process list found")
processlistloc = res
if not os.path.exists(os.path.basename(processlistloc)):
res = self.datMan.getFile(processlistloc)
if not res['OK']:
self.log.error('Could not get processlist: %s' %
res['Message'])
return res
self.processlist = ProcessList(os.path.basename(processlistloc))
return S_OK()
def applicationSpecificInputs(self):
"""Resolve module input
:return: S_OK()
"""
self.parameters['ENERGY'] = self.energy
if not self.RandomSeed and self.jobID:
self.RandomSeed = self.jobID
if 'IS_PROD' in self.workflow_commons or 'IS_DBD_GEN_PROD' in self.workflow_commons:
self.RandomSeed = int(
str(int(self.workflow_commons["PRODUCTION_ID"])) +
str(int(self.workflow_commons["JOB_ID"])))
self.parameters['SEED'] = self.RandomSeed
self.parameters['NBEVTS'] = self.NumberOfEvents
self.parameters['LUMI'] = self.Lumi
##EVER USED???
if 'SusyModel' in self.step_commons:
self.susymodel = self.step_commons['SusyModel']
self.SteeringFile = os.path.basename(
self.step_commons.get("InputFile", self.SteeringFile))
if self.SteeringFile == "whizard.in":
os.rename(self.SteeringFile, "whizardnew.in")
self.SteeringFile = "whizardnew.in"
self.parameters['PROCESS'] = self.evttype
listofparams = self.steeringparameters.split(";")
for param in listofparams:
if param.count("="):
self.parameters[param.split("=")[0]] = param.split("=")[1]
if self.OptionsDictStr:
self.log.info(
"Will use whizard.in definition from WhizardOptions.")
try:
self.optionsdict = eval(self.OptionsDictStr)
if 'integration_input' not in self.optionsdict:
self.optionsdict['integration_input'] = {}
if 'seed' not in self.optionsdict['integration_input']:
self.optionsdict['integration_input']['seed'] = int(
self.RandomSeed)
if 'process_input' in self.optionsdict:
if 'sqrts' in self.optionsdict['process_input']:
self.energy = self.optionsdict['process_input'][
'sqrts']
except:
return S_ERROR(
"Could not convert string to dictionary for optionsdict")
if self.GenLevelCutDictStr:
self.log.info("Found generator level cuts")
try:
self.genlevelcuts = eval(self.GenLevelCutDictStr)
except:
return S_ERROR(
"Could not convert the generator level cuts back to dictionary"
)
if not len(self.SteeringFile) and not self.optionsdict:
self.getProcessInFile = True
if "IS_PROD" in self.workflow_commons:
if self.workflow_commons["IS_PROD"] and not self.willCut:
#self.OutputFile = getProdFilename(self.OutputFile,int(self.workflow_commons["PRODUCTION_ID"]),
# int(self.workflow_commons["JOB_ID"]))
if 'ProductionOutputData' in self.workflow_commons:
outputlist = self.workflow_commons[
'ProductionOutputData'].split(";")
for obj in outputlist:
if obj.lower().count("_gen_"):
self.OutputFile = os.path.basename(obj)
break
else:
#This is because most likely there is stdhepcut running after
self.OutputFile = "willcut.stdhep"
#getProdFilename(self.OutputFile,int(self.workflow_commons["PRODUCTION_ID"]),
# int(self.workflow_commons["JOB_ID"]))
if "IS_DBD_GEN_PROD" in self.workflow_commons and self.workflow_commons[
"IS_DBD_GEN_PROD"]:
#self.OutputFile = getProdFilename(self.OutputFile,int(self.workflow_commons["PRODUCTION_ID"]),
# int(self.workflow_commons["JOB_ID"]))
if 'ProductionOutputData' in self.workflow_commons:
outputlist = self.workflow_commons[
'ProductionOutputData'].split(";")
for obj in outputlist:
self.OutputFile = os.path.basename(obj)
break
else:
self.OutputFile = getProdFilename(
self.OutputFile,
int(self.workflow_commons["PRODUCTION_ID"]),
int(self.workflow_commons["JOB_ID"]))
return S_OK()
def runIt(self):
""" Called by Agent
Executes the following
- resolve input variables
- resolve installation location
- resolve dependencies location (beam_spectra)
- get processlist if needed
- define output file name
- prepare whizard.in
- make magic
:return: S_OK(), S_ERROR()
"""
self.result = S_OK()
if not self.platform:
self.result = S_ERROR('No ILC platform selected')
elif not self.applicationLog:
self.result = S_ERROR('No Log file provided')
if not self.result['OK']:
self.log.error("Failed to resolve input parameters:",
self.result["Message"])
return self.result
if not self.workflowStatus['OK'] or not self.stepStatus['OK']:
self.log.verbose(
'Workflow status = %s, step status = %s' %
(self.workflowStatus['OK'], self.stepStatus['OK']))
return S_OK(
'Whizard should not proceed as previous step did not end properly'
)
#if self.debug:
# self.excludeAllButEventString = False
res = getSoftwareFolder(self.platform, self.applicationName,
self.applicationVersion)
if not res['OK']:
self.log.error("Failed getting software folder", res['Message'])
self.setApplicationStatus('Failed finding software')
return res
mySoftDir = res['Value']
###Remove libc
removeLibc(mySoftDir + "/lib")
##Need to fetch the new LD_LIBRARY_PATH
new_ld_lib_path = getNewLDLibs(self.platform, self.applicationName,
self.applicationVersion)
#Don't forget to prepend the application's libs
new_ld_lib_path = mySoftDir + "/lib:" + new_ld_lib_path
### Resolve dependencies (look for beam_spectra)
deps = resolveDeps(self.platform, self.applicationName,
self.applicationVersion)
path_to_beam_spectra = ""
path_to_gridfiles = ""
for dep in deps:
res = getSoftwareFolder(self.platform, dep["app"], dep['version'])
if not res['OK']:
self.log.error("Failed getting software folder",
res['Message'])
self.setApplicationStatus('Failed finding software')
return res
depfolder = res['Value']
if dep["app"] == "beam_spectra":
path_to_beam_spectra = depfolder
elif dep["app"] == "gridfiles":
path_to_gridfiles = depfolder
##Env variables needed to run whizard: avoids hard coded locations
os.environ['LUMI_LINKER'] = path_to_beam_spectra + "/lumi_linker_000"
os.environ[
'PHOTONS_B1'] = path_to_beam_spectra + "/photons_beam1_linker_000"
os.environ[
'PHOTONS_B2'] = path_to_beam_spectra + "/photons_beam2_linker_000"
os.environ['EBEAM'] = path_to_beam_spectra + "/ebeam_in_linker_000"
os.environ['PBEAM'] = path_to_beam_spectra + "/pbeam_in_linker_000"
os.environ[
'LUMI_EE_LINKER'] = path_to_beam_spectra + "/lumi_ee_linker_000"
os.environ[
'LUMI_EG_LINKER'] = path_to_beam_spectra + "/lumi_eg_linker_000"
os.environ[
'LUMI_GE_LINKER'] = path_to_beam_spectra + "/lumi_ge_linker_000"
os.environ[
'LUMI_GG_LINKER'] = path_to_beam_spectra + "/lumi_gg_linker_000"
list_of_gridfiles = []
if path_to_gridfiles and self.useGridFiles:
tmp_list_of_gridfiles = [
os.path.join(path_to_gridfiles, item)
for item in os.listdir(path_to_gridfiles)
]
gridfilesfound = False
for path in tmp_list_of_gridfiles:
if os.path.isdir(path) and path.count(str(self.energy)):
#Here look for a sub directory for the energy related grid files
list_of_gridfiles = [
os.path.join(path, item) for item in os.listdir(path)
]
gridfilesfound = True
self.log.info('Found grid files specific for energy %s' %
self.energy)
break
if not gridfilesfound:
self.log.info(
"Will use generic grid files found, hope the energy is set right"
)
list_of_gridfiles = [
item for item in
glob.glob(os.path.join(path_to_gridfiles, "*.grb")) +
glob.glob(os.path.join(path_to_gridfiles, "*.grc"))
]
template = False
if self.SteeringFile.count("template"):
template = True
## Get from process file the proper whizard.in file
if self.getProcessInFile:
whizardin = ""
res = self.obtainProcessList()
if not res['OK']:
self.log.error("Could not obtain process list")
self.setApplicationStatus('Failed getting processlist')
return res
whizardin = self.processlist.getInFile(self.evttype)
if not whizardin:
self.log.error(
"Whizard input file was not found in process list, cannot proceed"
)
self.setApplicationStatus('Whizard input file was not found')
return S_ERROR("Error while resolving whizard input file")
if whizardin.count("template"):
template = True
try:
shutil.copy("%s/%s" % (mySoftDir, whizardin),
"./whizardnew.in")
self.SteeringFile = "whizardnew.in"
except EnvironmentError:
self.log.error("Could not copy %s from %s" %
(whizardin, mySoftDir))
self.setApplicationStatus('Failed getting whizard.in file')
return S_ERROR("Failed to obtain %s" % whizardin)
##Check existence of Les Houches input file
leshouchesfiles = ''
if not os.path.exists("LesHouches.msugra_1.in"):
if self.susymodel:
if self.susymodel == 1:
if os.path.exists("%s/LesHouches_slsqhh.msugra_1.in" %
(mySoftDir)):
leshouchesfiles = "%s/LesHouches_slsqhh.msugra_1.in" % (
mySoftDir)
if self.susymodel == 2:
if os.path.exists("%s/LesHouches_chne.msugra_1.in" %
(mySoftDir)):
leshouchesfiles = "%s/LesHouches_chne.msugra_1.in" % (
mySoftDir)
if self.Model:
if self.genmodel.hasModel(self.Model)['OK']:
if self.genmodel.getFile(self.Model)['OK']:
if os.path.exists(
"%s/%s" %
(mySoftDir, self.genmodel.getFile(
self.Model)['Value'])):
leshouchesfiles = "%s/%s" % (
mySoftDir, self.genmodel.getFile(
self.Model)['Value'])
else:
self.log.error(
"Request LesHouches file is missing, cannot proceed"
)
self.setApplicationStatus(
"LesHouches file missing")
return S_ERROR(
"The LesHouches file was not found. Probably you are using a wrong version of whizard."
)
else:
self.log.warn("No file found attached to model %s" %
self.Model)
else:
self.log.error("Model undefined:", self.Model)
self.setApplicationStatus("Model undefined")
return S_ERROR("No Model %s defined" % self.Model)
else:
leshouchesfiles = "LesHouches.msugra_1.in"
outputfilename = self.evttype
if self.optionsdict:
self.log.info("Using: %s" % self.optionsdict)
self.options = WhizardOptions(self.Model)
res = self.options.changeAndReturn(self.optionsdict)
if not res['OK']:
return res
res = self.options.toWhizardDotIn("whizard.in")
elif not template:
res = prepareWhizardFile(self.SteeringFile, outputfilename,
self.energy, self.RandomSeed,
self.NumberOfEvents, self.Lumi,
"whizard.in")
else:
res = prepareWhizardFileTemplate(self.SteeringFile, outputfilename,
self.parameters, "whizard.in")
if not res['OK']:
self.log.error('Something went wrong with input file generation')
self.setApplicationStatus(
'Whizard: something went wrong with input file generation')
return S_ERROR(
'Something went wrong with whizard.in file generation')
foundproceesinwhizardin = res['Value']
scriptName = 'Whizard_%s_Run_%s.sh' % (self.applicationVersion,
self.STEP_NUMBER)
if os.path.exists(scriptName):
os.remove(scriptName)
script = open(scriptName, 'w')
script.write('#!/bin/sh \n')
script.write(
'#####################################################################\n'
)
script.write(
'# Dynamically generated script to run a production or analysis job. #\n'
)
script.write(
'#####################################################################\n'
)
script.write('declare -x PATH=%s:$PATH\n' % mySoftDir)
script.write('declare -x LD_LIBRARY_PATH=%s\n' % new_ld_lib_path)
script.write('env | sort >> localEnv.log\n')
script.write('echo =============================\n')
script.write('echo Printing content of whizard.in \n')
script.write('cat whizard.in\n')
script.write('echo =============================\n')
script.write('cp %s/whizard.mdl ./\n' % mySoftDir)
if leshouchesfiles:
if not leshouchesfiles == 'LesHouches.msugra_1.in':
script.write('cp %s ./LesHouches.msugra_1.in\n' %
(leshouchesfiles))
script.write('ln -s LesHouches.msugra_1.in fort.71\n')
if len(list_of_gridfiles):
for gridfile in list_of_gridfiles:
script.write('cp %s ./\n' % (gridfile))
script.write('cp %s/whizard.prc ./\n' % mySoftDir)
if self.genlevelcuts:
res = self.makeWhizardDotCut1()
if not res['OK']:
script.close()
self.log.error("Could not create the cut1 file")
return S_ERROR("Could not create the cut1 file")
script.write('echo =============================\n')
script.write('echo Printing content of whizard.prc \n')
script.write('cat whizard.prc\n')
script.write('echo =============================\n')
extracmd = ""
if not self.debug:
extracmd = "2>/dev/null"
comm = ""
if foundproceesinwhizardin:
comm = 'whizard --simulation_input \'write_events_file = \"%s\"\'' % (
outputfilename)
else:
comm = 'whizard --process_input \'process_id =\"%s\"\' --simulation_input \'write_events_file = \"%s\"\' ' % (
self.evttype, outputfilename)
comm = "%s %s %s\n" % (comm, self.extraCLIarguments, extracmd)
self.log.info("Will run %s" % comm)
script.write(comm)
script.write('declare -x appstatus=$?\n')
script.write('exit $appstatus\n')
script.close()
if os.path.exists(self.applicationLog):
os.remove(self.applicationLog)
os.chmod(scriptName, 0755)
comm = 'sh -c "./%s"' % (scriptName)
self.setApplicationStatus('Whizard %s step %s' %
(self.applicationVersion, self.STEP_NUMBER))
self.stdError = ''
self.result = shellCall(0,
comm,
callbackFunction=self.redirectLogOutput,
bufferLimit=209715200)
#self.result = {'OK':True,'Value':(0,'Disabled Execution','')}
if not self.result['OK']:
self.log.error("Failed with error %s" % self.result['Message'])
if not os.path.exists(self.applicationLog):
self.log.error(
"Something went terribly wrong, the log file is not present")
self.setApplicationStatus('%s failed terribly, you are doomed!' %
(self.applicationName))
if not self.ignoreapperrors:
return S_ERROR('%s did not produce the expected log' %
(self.applicationName))
lumi = ''
message = ""
success = False
###Analyse log file
with open(self.applicationLog) as logfile:
for line in logfile:
if line.count('! Event sample corresponds to luminosity'):
elems = line.split()
lumi = elems[-1]
if line.count("*** Fatal error:"):
status = 1
message = line
break
elif line.count("PYSTOP"):
status = 1
message = line
break
elif line.count("No matrix element available"):
status = 1
message = line
break
elif line.count("Floating point exception"):
status = 1
message = line
break
elif line.count("Event generation finished."):
success = True
else:
status = 0
if success:
status = 0
else:
status = 1
self.log.info(
'The sample generated has an equivalent luminosity of %s' % lumi)
if lumi:
self.workflow_commons['Luminosity'] = float(lumi)
else:
status = 1
##Now care for the cross sections
info = {}
res = self.options.getAsDict()
if os.path.exists("whizard.out") and res['OK']:
full_opts_dict = res['Value']
processes = full_opts_dict['process_input']['process_id'].split()
info = {}
info['xsection'] = {}
processes.append('sum')
with open("whizard.out", "r") as inf:
for line in inf:
line = line.rstrip()
for process in processes:
if not process:
continue
if line.count(" %s " % process):
info['xsection'][process] = {}
line = line.lstrip()
crosssection = line.split()[1]
err_crosssection = line.split()[2]
frac = line.split()[4]
info['xsection'][process]['xsection'] = float(
crosssection)
info['xsection'][process]['err_xsection'] = float(
err_crosssection)
info['xsection'][process]['fraction'] = float(frac)
if info:
if 'Info' not in self.workflow_commons:
self.workflow_commons['Info'] = info
else:
self.workflow_commons['Info'].update(info)
self.log.info("Status after the application execution is %s" %
str(status))
messageout = 'Whizard %s Successful' % (self.applicationVersion)
failed = False
if status != 0:
self.log.error("Whizard execution completed with errors:")
failed = True
else:
self.log.info("Whizard execution completed successfully")
###Deal with output file
if len(self.OutputFile):
if os.path.exists(outputfilename + ".001.stdhep"):
self.log.notice("Looking for output files")
ofnames = glob.glob(outputfilename + '*.stdhep')
if len(ofnames) > 1:
basename = self.OutputFile.split(".stdhep")[0]
i = 0
for of in ofnames:
i += 1
name = basename + "_" + str(i) + ".stdhep"
os.rename(of, name)
else:
os.rename(outputfilename + ".001.stdhep",
self.OutputFile)
else:
self.log.error(
"Whizard execution did not produce a stdhep file")
self.setApplicationStatus(
'Whizard %s Failed to produce STDHEP file' %
(self.applicationVersion))
messageout = 'Whizard Failed to produce STDHEP file'
if not self.ignoreapperrors:
return S_ERROR(messageout)
if failed is True:
self.log.error("==================================\n StdError:\n")
self.log.error(message)
self.setApplicationStatus('%s Exited With Status %s' %
(self.applicationName, status))
self.log.error('Whizard Exited With Status %s' % (status))
messageout = 'Whizard Exited With Status %s' % (status)
if not self.ignoreapperrors:
return S_ERROR(messageout)
else:
self.setApplicationStatus(messageout)
return S_OK({"OutputFile": self.OutputFile})
def makeWhizardDotCut1(self):
""" When users need whizard cuts, this is called to prepare the file
:return: S_OK()
"""
cutf = open("whizard.cut1", "w")
for key, values in self.genlevelcuts.items():
cutf.write("process %s\n" % key)
for val in values:
cutf.write(" %s\n" % val)
cutf.close()
return S_OK()
class ProcessListComplexTestCase( unittest.TestCase ):
""" Test the different methods of the class, providing a usable CFG
"""
def setUp( self ):
with patch('%s.os.path.exists' % MODULE_NAME, new=Mock(return_value=False)):
self.prol = ProcessList( 'myTestProcess.list' )
self.prol.cfg.createNewSection( 'Processes' )
def test_updateproclist_and_getters( self ):
self.prol.cfg.createNewSection( 'Processes/myTestProcDeleteMe' )
self.prol.cfg.setOption( 'Processes/myTestProcDeleteMe/someRandomOption', True )
dict_1 = { 'CrossSection' : 'someCross' }
dict_1.update( STD_PROC_DICT )
dict_2 = { 'CrossSection' : 'some_other_val' }
dict_2.update( STD_PROC_DICT )
process_dict = {}
process_dict[ 'MytestProcess' ] = dict_1
process_dict[ 'myTestProcDeleteMe' ] = dict_2
result = self.prol.updateProcessList( process_dict )
assertDiracSucceeds( result, self )
conf = self.prol.cfg
self.assertFalse( conf.existsKey( 'Processes/myTestProcDeleteMe/someRandomOption' ) )
options = [ 'Processes/MytestProcess/CrossSection', 'Processes/myTestProcDeleteMe/CrossSection' ]
assertEqualsImproved( ( map( conf.getOption, options ) ), ( [ 'someCross', 'some_other_val' ] ), self )
assertEqualsImproved( ( self.prol.getCSPath( 'myTestProcDeleteMe' ),
self.prol.getInFile( 'myTestProcDeleteMe' ),
self.prol.existsProcess( 'myTestProcDeleteMe' ),
self.prol.existsProcess( '' ), self.prol.existsProcess( 'invalidProcess' ),
self.prol.existsProcess( 'myTestProcDeleteMeToo' ) ),
( '/test/cs/path/ball.tar', 'my/file.in', S_OK(True), S_OK(True), S_OK(False),
S_OK(False) ), self )
assertListContentEquals( self.prol.getProcesses(), [ 'myTestProcDeleteMe', 'MytestProcess' ], self )
all_processes_dict = self.prol.getProcessesDict()
assertEqualsImproved( len(all_processes_dict), 2, self )
assertEqualsImproved( ('myTestProcDeleteMe' in all_processes_dict, 'MytestProcess' in all_processes_dict),
( True, True ), self )
self.prol.printProcesses()
def test_writeproclist( self ):
expected_write = 'Processes\n{\n mytestprocess123\n {\n TarBallCSPath = /test/cs/path/bal.tarr\n Detail = TestNoDetails\n Generator = mytestGen21\n Model = testmodel3001\n Restrictions = \n InFile = my/file.in\n CrossSection = 0\n }\n}\n'
self.prol._addEntry( 'mytestprocess123', { 'TarBallCSPath' : '/test/cs/path/bal.tarr', 'Detail' :
'TestNoDetails', 'Generator' : 'mytestGen21', 'Model' :
'testmodel3001', 'Restrictions' : '', 'InFile' : 'my/file.in'
} )
exists_dict = { '/temp/dir' : False, '/temp/dir/mytempfile.txt' : True, '/my/folder/testpath.xml' : True }
fhandle_mock = Mock()
file_mock = Mock(return_value=fhandle_mock)
with patch('tempfile.mkstemp', new=Mock(return_value=('handle', '/temp/dir/mytempfile.txt'))), \
patch('__builtin__.file', new=file_mock), \
patch('__builtin__.open', new=file_mock), \
patch('os.makedirs') as mkdir_mock, \
patch('os.path.exists', new=Mock(side_effect=lambda path: exists_dict[path])), \
patch('shutil.move') as move_mock, \
patch('os.close') as close_mock:
assertDiracSucceedsWith_equals( self.prol.writeProcessList( '/my/folder/testpath.xml' ),
'/my/folder/testpath.xml', self )
mkdir_mock.assert_called_once_with( '/temp/dir' )
file_mock.assert_called_once_with( '/temp/dir/mytempfile.txt', 'w' )
fhandle_mock.write.assert_called_once_with( expected_write )
close_mock.assert_called_once_with( 'handle' )
move_mock.assert_called_once_with( '/temp/dir/mytempfile.txt', '/my/folder/testpath.xml' )
def test_writeproclist_notwritten( self ):
exists_dict = { 'myTmpNameTestme' : True }
cfg_mock = Mock()
cfg_mock.writeToFile.return_value = False
self.prol.cfg = cfg_mock
self.prol.location = '/my/folder/testpath2.txt'
with patch('os.close') as close_mock, \
patch('os.path.exists', new=Mock(side_effect=lambda path: exists_dict[path])), \
patch('os.remove') as remove_mock, \
patch('tempfile.mkstemp', new=Mock(return_value=('myhandle', 'myTmpNameTestme'))):
assertDiracFailsWith( self.prol.writeProcessList(), 'failed to write repo', self )
close_mock.assert_called_once_with( 'myhandle' )
remove_mock.assert_called_once_with( 'myTmpNameTestme')
def test_writeproclist_notwritten_noremove( self ):
exists_dict = { 'myTmpNameTestme' : False }
cfg_mock = Mock()
cfg_mock.writeToFile.return_value = False
self.prol.cfg = cfg_mock
with patch('os.close') as close_mock, \
patch('os.path.exists', new=Mock(side_effect=lambda path: exists_dict[path])), \
patch('os.remove') as remove_mock, \
patch('tempfile.mkstemp', new=Mock(return_value=('myhandle', 'myTmpNameTestme'))):
assertDiracFailsWith( self.prol.writeProcessList( '/my/folder/testpath2.txt' ),
'failed to write repo', self )
close_mock.assert_called_once_with( 'myhandle' )
self.assertFalse( remove_mock.called )
def test_writeproclist_move_fails( self ):
exists_dict = { '/my/folder/testpath2.txt' : False }
cfg_mock = Mock()
cfg_mock.writeToFile.return_value = True
self.prol.cfg = cfg_mock
with patch('os.close') as close_mock, \
patch('os.path.exists', new=Mock(side_effect=lambda path: exists_dict[path])), \
patch('os.remove') as remove_mock, \
patch('tempfile.mkstemp', new=Mock(return_value=('myhandle', 'myTmpNameTestme'))), \
patch('shutil.move', new=Mock(side_effect=OSError('mytestErr_os'))):
assertDiracFailsWith( self.prol.writeProcessList( '/my/folder/testpath2.txt' ),
'failed to write repo', self )
close_mock.assert_called_once_with( 'myhandle' )
self.assertFalse( remove_mock.called )
def test_uploadproclist( self ):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_OK('something')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
fileutil_mock.upload.return_value = S_OK('something')
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK( '/local/path/proc.list' )
mocked_modules = { 'DIRAC.DataManagementSystem.Client.DataManager' : datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils' : fileutil_mock }
module_patcher = patch.dict( sys.modules, mocked_modules )
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
with patch('shutil.copy') as copy_mock, \
patch('subprocess.call') as proc_mock:
self.prol.uploadProcessListToFileCatalog( '/my/secret/path/processlist.whiz', 'v120' )
assertMockCalls( copy_mock, [
( 'myTestProcess.list', '/afs/cern.ch/eng/clic/software/whizard/whizard_195/' ),
( 'myTestProcess.list', '/local/path/proc.list' ) ], self )
proc_mock.assert_called_once_with(
[ 'svn', 'ci', '/afs/cern.ch/eng/clic/software/whizard/whizard_195/proc.list',
"-m'Process list for whizard version v120'" ], shell=False )
DIRAC.gConfig = backup_conf
module_patcher.stop()
def test_uploadproclist_remove_fails( self ):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_ERROR('my_test_err')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK( 'somepath' )
mocked_modules = { 'DIRAC.DataManagementSystem.Client.DataManager' : datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils' : fileutil_mock }
module_patcher = patch.dict( sys.modules, mocked_modules )
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
DIRAC.exit = abort_test
with self.assertRaises( KeyboardInterrupt ) as ki:
self.prol.uploadProcessListToFileCatalog( 'asd', 'v1' )
key_interrupt = ki.exception
assertEqualsImproved( key_interrupt.args, ( 'abort_my_test', ), self )
DIRAC.gConfig = backup_conf
module_patcher.stop()
def test_uploadproclist_upload_fails( self ):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_OK('something')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
fileutil_mock.upload.return_value = S_ERROR('something')
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK( 'somepath' )
mocked_modules = { 'DIRAC.DataManagementSystem.Client.DataManager' : datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils' : fileutil_mock }
module_patcher = patch.dict( sys.modules, mocked_modules )
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
DIRAC.exit = abort_test
with self.assertRaises( KeyboardInterrupt ) as ki:
self.prol.uploadProcessListToFileCatalog( 'asd', 'v1' )
key_interrupt = ki.exception
assertEqualsImproved( key_interrupt.args, ( 'abort_my_test', ), self )
DIRAC.gConfig = backup_conf
module_patcher.stop()
def test_uploadproclist_copy_and_commit_fail( self ):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_OK('something')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
fileutil_mock.upload.return_value = S_OK('something')
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK( 'somepath' )
mocked_modules = { 'DIRAC.DataManagementSystem.Client.DataManager' : datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils' : fileutil_mock }
module_patcher = patch.dict( sys.modules, mocked_modules )
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
DIRAC.exit = abort_test
with patch('shutil.copy', new=Mock(side_effect=OSError('oserr_testme_keeprunning'))), \
patch('subprocess.call', new=Mock(side_effect=OSError('subproc_test_err'))):
self.prol.uploadProcessListToFileCatalog( '/my/secret/path/processlist.whiz', 'v120' )
DIRAC.gConfig = backup_conf
module_patcher.stop()
def test_uploadproclist_skip_copy( self ):
import sys
import DIRAC
datman_mock = Mock()
datman_mock.removeFile.return_value = S_OK('something')
datmodule_mock = Mock()
datmodule_mock.DataManager.return_value = datman_mock
fileutil_mock = Mock()
fileutil_mock.upload.return_value = S_OK('something')
conf_mock = Mock()
conf_mock.getOption.return_value = S_OK('')
mocked_modules = { 'DIRAC.DataManagementSystem.Client.DataManager' : datmodule_mock,
'ILCDIRAC.Core.Utilities.FileUtils' : fileutil_mock }
module_patcher = patch.dict( sys.modules, mocked_modules )
module_patcher.start()
backup_conf = DIRAC.gConfig
DIRAC.gConfig = conf_mock
DIRAC.exit = abort_test
with patch('shutil.copy', new=Mock(side_effect=IOError('dont_call_me'))), \
patch('subprocess.call', new=Mock(side_effect=IOError('dont_call_me_either'))):
self.prol.uploadProcessListToFileCatalog( '/my/secret/path/processlist.whiz', 'v120' )
DIRAC.gConfig = backup_conf
module_patcher.stop()
