def __init__(self, parent, dsviewer):
wx.Panel.__init__(self, parent, -1)
dirname = os.path.dirname(__file__)
self.do = dsviewer.do
self.dsviewer = dsviewer
self.bmStartSeek = wx.Bitmap(
resources.getIconPath('media-skip-backward.png'))
self.bmPlay = wx.Bitmap(
resources.getIconPath('media-playback-start.png'))
self.bmPause = wx.Bitmap(
resources.getIconPath('media-playback-pause.png'))
self.mode = 'HORIZ'
self.moving = False
#timer for playback
self.tPlay = mytimer()
self.tPlay.WantNotification.append(self.OnFrame)
self.do.WantChangeNotification.append(self.update)
self.genContents(self.mode)
self.Bind(wx.EVT_SIZE, self.OnSize)
def __init__(self, parent, scope, size=(-1, -1)):
wx.Panel.__init__(self, parent, size=size)
self.tickcount = 0
self.messages = {}
self.startTime = time.time()
self.times = {'total': 6}
with scope.settingsDB as conn:
tims = conn.execute('SELECT * FROM StartupTimes').fetchall()
for ti in tims:
self.times[ti[0]] = ti[1]
self.Bind(wx.EVT_PAINT, self.OnPaint)
logofilename = resources.getIconPath('logo_fmhs.png')
self.bmLogo = wx.Bitmap(logofilename, wx.BITMAP_TYPE_PNG)
logofilename = resources.getIconPath('YSM_Shield.png')
self.bmLogo2 = wx.Bitmap(logofilename, wx.BITMAP_TYPE_PNG)
def CreateToolBar(self, wind):
global bmCrosshairs, bmRectSelect, bmLineSelect, bmSquiggleSelect
if bmCrosshairs is None: #load bitmaps on first use
bmCrosshairs = wx.Bitmap(resources.getIconPath('crosshairs.png'))
bmRectSelect = wx.Bitmap(resources.getIconPath('rect_select.png'))
bmLineSelect = wx.Bitmap(resources.getIconPath('line_select.png'))
bmSquiggleSelect = wx.Bitmap(
resources.getIconPath('squiggle_select.png'))
self.toolB = aui.AuiToolBar(wind,
-1,
wx.DefaultPosition,
wx.DefaultSize,
agwStyle=aui.AUI_TB_DEFAULT_STYLE
| aui.AUI_TB_OVERFLOW
| aui.AUI_TB_VERTICAL)
self.toolB.SetToolBitmapSize(wx.Size(16, 16))
#ID_POINTER = wx.NewId()
ID_CROSSHAIRS = wx.NewId()
ID_RECTSELECT = wx.NewId()
ID_LINESELECT = wx.NewId()
ID_SQUIGGLESELECT = wx.NewId()
self.toolB.AddRadioTool(ID_CROSSHAIRS, "Point selection", bmCrosshairs,
bmCrosshairs)
self.toolB.AddRadioTool(ID_RECTSELECT, "Rectangle selection",
bmRectSelect, bmRectSelect)
self.toolB.AddRadioTool(ID_LINESELECT, "Line selection", bmLineSelect,
bmLineSelect)
self.toolB.AddRadioTool(ID_SQUIGGLESELECT, "Freeform selection",
bmSquiggleSelect, bmSquiggleSelect)
self.toolB.Realize()
#self._mgr.AddPane(tb5, aui.AuiPaneInfo().Name("tb5").Caption("Sample Vertical Toolbar").
# ToolbarPane().Left().GripperTop())
self.toolB.ToggleTool(ID_CROSSHAIRS, True)
wind.Bind(wx.EVT_TOOL, self.OnSelectCrosshairs, id=ID_CROSSHAIRS)
wind.Bind(wx.EVT_TOOL, self.OnSelectRectangle, id=ID_RECTSELECT)
wind.Bind(wx.EVT_TOOL, self.OnSelectLine, id=ID_LINESELECT)
wind.Bind(aui.EVT_AUITOOLBAR_RIGHT_CLICK,
self.OnLineThickness,
id=ID_LINESELECT)
wind.Bind(wx.EVT_TOOL, self.OnSelectSquiggle, id=ID_SQUIGGLESELECT)
return self.toolB
def OnAbout(self, event):
from PYME.version import version
from PYME.resources import getIconPath
import wx.adv
# msg = "PYME Visualise\n\n Visualisation of localisation microscopy data\nDavid Baddeley 2009"
# dlg = wx.MessageDialog(self, msg, "About PYME Visualise",
# wx.OK | wx.ICON_INFORMATION)
# dlg.SetFont(wx.Font(8, wx.NORMAL, wx.NORMAL, wx.NORMAL, False, "Verdana"))
# dlg.ShowModal()
# dlg.Destroy()
dlg = wx.adv.AboutDialogInfo()
dlg.SetName("PYME Visualise")
dlg.SetVersion(version)
dlg.SetDescription("Visualisation of localisation microscopy data.")
dlg.SetCopyright("(C)2009-2021")
dlg.SetIcon(wx.Icon(getIconPath('pymeLogo.png')))
#dlg.SetLicense("GPLv3") # I think we need to either expand or omit
# TODO: should this be the issues page or the website
dlg.SetWebSite(
"https://github.com/python-microscopy/python-microscopy/issues",
desc="Report an issue")
#dlg.AddDeveloper("David Baddeley") #should probably be all or none here, punting full list for now
wx.adv.AboutBox(dlg)
cherrypy.config.update({
'server.socket_port': 8979,
'server.socket_host': '127.0.0.1',
#'log.screen': False,
'log.access_file': '',
'log.error_file': '',
'server.thread_pool': 50,
#'tools.staticdir.on': True,'tools.staticdir.root': static_dir
})
conf = { #'/':{
#'tools.staticdir.on': True,'tools.staticdir.root': static_dir
#},
'/static': {
'tools.staticdir.on': True,
'tools.staticdir.dir': static_dir
},
'/favicon.ico': {
'tools.staticfile.on': True,
'tools.staticfile.filename': resources.getIconPath('pymeLogo.png')
}
}
#logging.getLogger('cherrypy.access').setLevel(logging.ERROR)
#externalAddr = socket.gethostbyname(socket.gethostname())
#app = cherrypy.tree.mount(tile_server, '/')
#app.log.access_log.setLevel(logging.ERROR)
cherrypy.quickstart(tile_server, '/', conf)
def __init__(self, parent, glCanvas, visFr):
wx.Panel.__init__(self, parent, -1)
self.glCanvas = glCanvas
self.visFr = visFr
self.scaleBarLengths = OrderedDict([('<None>', None), ('50nm', 50),
('200nm', 200), ('500nm', 500),
('1um', 1000), ('5um', 5000)])
hsizer = wx.BoxSizer(wx.HORIZONTAL)
self.r3DMode = wx.RadioBox(self, choices=['2D', '3D'])
self.r3DMode.Bind(wx.EVT_RADIOBOX, self.OnChange3D)
hsizer.Add(self.r3DMode, 0,
wx.LEFT | wx.RIGHT | wx.ALIGN_CENTER_VERTICAL, 2)
hsizer.AddSpacer(10)
bTop = wx.BitmapButton(self,
-1,
wx.Bitmap(getIconPath('view-top.png')),
style=wx.NO_BORDER | wx.BU_AUTODRAW,
name='Top')
bTop.Bind(wx.EVT_BUTTON, self.OnViewTop)
hsizer.Add(bTop, 0, wx.LEFT | wx.RIGHT | wx.ALIGN_CENTER_VERTICAL, 0)
bFront = wx.BitmapButton(self,
-1,
wx.Bitmap(getIconPath('view-front.png')),
style=wx.NO_BORDER | wx.BU_AUTODRAW,
name='Front')
bFront.Bind(wx.EVT_BUTTON, self.OnViewFront)
hsizer.Add(bFront, 0, wx.LEFT | wx.RIGHT | wx.ALIGN_CENTER_VERTICAL, 0)
bRight = wx.BitmapButton(self,
-1,
wx.Bitmap(getIconPath('view-right.png')),
style=wx.NO_BORDER | wx.BU_AUTODRAW,
name='Right')
bRight.Bind(wx.EVT_BUTTON, self.OnViewRight)
hsizer.Add(bRight, 0, wx.LEFT | wx.RIGHT | wx.ALIGN_CENTER_VERTICAL, 0)
hsizer.AddSpacer(10)
cbLUTDraw = wx.ToggleButton(self, -1, 'LUT', style=wx.BU_EXACTFIT)
#cbLUTDraw.SetBitmap(wx.Bitmap(getIconPath('LUT.png')))
#cbLUTDraw = wx.BitmapToggleButton(self, -1, wx.Bitmap(getIconPath('LUT.png')))
cbLUTDraw.SetValue(self.glCanvas.LUTDraw)
#cbLUTDraw.Bind(wx.EVT_CHECKBOX, self.OnLUTDrawCB)
cbLUTDraw.Bind(wx.EVT_TOGGLEBUTTON, self.OnLUTDrawCB)
hsizer.Add(cbLUTDraw, 0, wx.LEFT | wx.RIGHT | wx.ALIGN_CENTER_VERTICAL,
2)
hsizer.AddSpacer(10)
#Scale Bar
hsizer.Add(wx.StaticText(self, -1, 'Scale Bar: '), 0,
wx.LEFT | wx.ALIGN_CENTER_VERTICAL, 5)
chInd = list(self.scaleBarLengths.values()).index(
self.glCanvas.scaleBarLength)
chScaleBar = wx.Choice(self,
-1,
choices=list(self.scaleBarLengths.keys()))
chScaleBar.SetSelection(chInd)
hsizer.Add(chScaleBar, 0, wx.RIGHT | wx.ALIGN_CENTER_VERTICAL, 5)
hsizer.AddSpacer(10)
#Background colour
hsizer.Add(wx.StaticText(self, -1, 'BG Colour: '), 0,
wx.LEFT | wx.ALIGN_CENTER_VERTICAL, 5)
colour_ctrl = wx.ColourPickerCtrl(self)
colour_ctrl.Bind(wx.EVT_COLOURPICKER_CHANGED, self.OnColourChanged)
hsizer.Add(colour_ctrl, 0, wx.RIGHT | wx.ALIGN_CENTER_VERTICAL, 5)
self.SetSizerAndFit(hsizer)
#self._pnl.AddFoldPanelWindow(self, pan, fpb.FPB_ALIGN_WIDTH, fpb.FPB_DEFAULT_SPACING, 10)
chScaleBar.Bind(wx.EVT_CHOICE, self.OnChangeScaleBar)
