def __init__(self, *args):
AnalysisModule.__init__(self, *args)
self.ui = Ui_Form()
self.ui.setupUi(self)
self.postGuiInit()
self.man = getManager()
#devs = self.man.listDevices()
#for d in devs:
#self.ui.scannerDevCombo.addItem(d)
#self.ui.clampDevCombo.addItem(d)
#self.fillModuleList()
self.ui.scannerDevCombo.setTypes('scanner')
self.ui.clampDevCombo.setTypes('clamp')
self.ui.cameraModCombo.setTypes('cameraModule')
self.tasks = {}
self.currentTask = None
self.ui.deleteBtn.clicked.connect(self.deleteSelected)
self.stateGroup.sigChanged.connect(self.stateChanged)
self.ui.taskList.currentItemChanged.connect(self.itemSelected)
self.ui.taskList.itemClicked.connect(self.itemClicked)
self.ui.recomputeBtn.clicked.connect(self.recompute)
def __init__(self, *args):
AnalysisModule.__init__(self, *args)
self.ui = Ui_Form()
self.ui.setupUi(self)
self.postGuiInit()
self.man = getManager()
#devs = self.man.listDevices()
#for d in devs:
#self.ui.scannerDevCombo.addItem(d)
#self.ui.clampDevCombo.addItem(d)
#self.fillModuleList()
self.ui.scannerDevCombo.setTypes('scanner')
self.ui.clampDevCombo.setTypes('clamp')
self.ui.cameraModCombo.setTypes('cameraModule')
self.tasks = {}
self.currentTask = None
self.ui.deleteBtn.clicked.connect(self.deleteSelected)
self.stateGroup.sigChanged.connect(self.stateChanged)
self.ui.taskList.currentItemChanged.connect(self.itemSelected)
self.ui.taskList.itemClicked.connect(self.itemClicked)
self.ui.recomputeBtn.clicked.connect(self.recompute)
class UncagingModule(AnalysisModule):
def __init__(self, *args):
AnalysisModule.__init__(self, *args)
self.ui = Ui_Form()
self.ui.setupUi(self)
self.postGuiInit()
self.man = getManager()
#devs = self.man.listDevices()
#for d in devs:
#self.ui.scannerDevCombo.addItem(d)
#self.ui.clampDevCombo.addItem(d)
#self.fillModuleList()
self.ui.scannerDevCombo.setTypes('scanner')
self.ui.clampDevCombo.setTypes('clamp')
self.ui.cameraModCombo.setTypes('cameraModule')
self.tasks = {}
self.currentTask = None
self.ui.deleteBtn.clicked.connect(self.deleteSelected)
self.stateGroup.sigChanged.connect(self.stateChanged)
self.ui.taskList.currentItemChanged.connect(self.itemSelected)
self.ui.taskList.itemClicked.connect(self.itemClicked)
self.ui.recomputeBtn.clicked.connect(self.recompute)
#self.man.sigModulesChanged.connect(self.fillModuleList)
def quit(self):
AnalysisModule.quit(self)
for k in self.tasks:
self.tasks[k].close()
self.tasks.clear()
self.currentTask = None
#def fillModuleList(self):
#mods = self.man.listModules()
#self.ui.cameraModCombo.clear()
#for m in mods:
#self.ui.cameraModCombo.addItem(m)
def taskSequenceStarted(self, *args):
#print "start:",args
#self.newTask()
pass
def taskFinished(self):
self.currentTask = None
def newFrame(self, frame):
if not self.ui.enabledCheck.isChecked():
return
if self.currentTask is None:
self.newTask()
self.currentTask.addFrame(frame)
def newTask(self):
n = self.pr.currentTask.name()
if n is None:
n = 'protocol'
i = 0
while True:
name = n + ("_%03d" % i)
if name not in self.tasks:
break
i += 1
p = Task(name, self)
self.currentTask = p
self.tasks[name] = p
item = QtGui.QListWidgetItem(name)
item.setCheckState(QtCore.Qt.Checked)
self.ui.taskList.addItem(item)
self.ui.taskList.setCurrentItem(item)
def deleteSelected(self):
row = self.ui.taskList.currentRow()
if row == -1:
return
item = self.ui.taskList.takeItem(row)
name = str(item.text())
self.tasks[name].close()
del self.tasks[name]
if self.currentTask is not None and self.currentTask.name == name:
self.currentTask = None
def selectedTask(self):
row = self.ui.taskList.currentRow()
if row == -1:
return None
item = self.ui.taskList.item(row)
name = str(item.text())
return self.tasks[name]
def stateChanged(self, *args):
sp = self.selectedTask()
if sp is not None:
sp.updateParams(*args)
def itemSelected(self, *args):
sp = self.selectedTask()
if sp is not None:
self.stateGroup.setState(sp.getState())
def itemClicked(self, item):
task = self.tasks[str(item.text())]
if item.checkState() == QtCore.Qt.Checked:
task.show()
else:
task.hide()
def recompute(self):
sp = self.selectedTask()
if sp is not None:
sp.recalculate(allFrames=True)
def quit(self):
#QtCore.QObject.disconnect(getManager(), QtCore.SIGNAL('modulesChanged'), self.fillModuleList)
#getManager().sigModulesChanged.disconnect(self.fillModuleList)
AnalysisModule.quit(self)
for p in self.tasks.values():
p.close()
def cameraModule(self):
return self.ui.cameraModCombo.getSelectedObj()
#return str(self.ui.cameraModCombo.currentText())
def cameraDevice(self):
camMod = self.cameraModule()
#mod = self.man.getModule(camMod)
if 'camDev' in camMod.config:
return camMod.config['camDev']
else:
return None
def clampDevice(self):
return str(self.ui.clampDevCombo.currentText())
def scannerDevice(self):
return str(self.ui.scannerDevCombo.currentText())
class UncagingModule(AnalysisModule):
def __init__(self, *args):
AnalysisModule.__init__(self, *args)
self.ui = Ui_Form()
self.ui.setupUi(self)
self.postGuiInit()
self.man = getManager()
#devs = self.man.listDevices()
#for d in devs:
#self.ui.scannerDevCombo.addItem(d)
#self.ui.clampDevCombo.addItem(d)
#self.fillModuleList()
self.ui.scannerDevCombo.setTypes('scanner')
self.ui.clampDevCombo.setTypes('clamp')
self.ui.cameraModCombo.setTypes('cameraModule')
self.tasks = {}
self.currentTask = None
self.ui.deleteBtn.clicked.connect(self.deleteSelected)
self.stateGroup.sigChanged.connect(self.stateChanged)
self.ui.taskList.currentItemChanged.connect(self.itemSelected)
self.ui.taskList.itemClicked.connect(self.itemClicked)
self.ui.recomputeBtn.clicked.connect(self.recompute)
#self.man.sigModulesChanged.connect(self.fillModuleList)
def quit(self):
AnalysisModule.quit(self)
for k in self.tasks:
self.tasks[k].close()
self.tasks.clear()
self.currentTask = None
#def fillModuleList(self):
#mods = self.man.listModules()
#self.ui.cameraModCombo.clear()
#for m in mods:
#self.ui.cameraModCombo.addItem(m)
def taskSequenceStarted(self, *args):
#print "start:",args
#self.newTask()
pass
def taskFinished(self):
self.currentTask = None
def newFrame(self, frame):
if not self.ui.enabledCheck.isChecked():
return
if self.currentTask is None:
self.newTask()
self.currentTask.addFrame(frame)
def newTask(self):
n = self.pr.currentTask.name()
if n is None:
n = 'protocol'
i = 0
while True:
name = n + ("_%03d" % i)
if name not in self.tasks:
break
i += 1
p = Task(name, self)
self.currentTask = p
self.tasks[name] = p
item = QtGui.QListWidgetItem(name)
item.setCheckState(QtCore.Qt.Checked)
self.ui.taskList.addItem(item)
self.ui.taskList.setCurrentItem(item)
def deleteSelected(self):
row = self.ui.taskList.currentRow()
if row == -1:
return
item = self.ui.taskList.takeItem(row)
name = str(item.text())
self.tasks[name].close()
del self.tasks[name]
if self.currentTask is not None and self.currentTask.name == name:
self.currentTask = None
def selectedTask(self):
row = self.ui.taskList.currentRow()
if row == -1:
return None
item = self.ui.taskList.item(row)
name = str(item.text())
return self.tasks[name]
def stateChanged(self, *args):
sp = self.selectedTask()
if sp is not None:
sp.updateParams(*args)
def itemSelected(self, *args):
sp = self.selectedTask()
if sp is not None:
self.stateGroup.setState(sp.getState())
def itemClicked(self, item):
task = self.tasks[str(item.text())]
if item.checkState() == QtCore.Qt.Checked:
task.show()
else:
task.hide()
def recompute(self):
sp = self.selectedTask()
if sp is not None:
sp.recalculate(allFrames=True)
def quit(self):
#QtCore.QObject.disconnect(getManager(), QtCore.SIGNAL('modulesChanged'), self.fillModuleList)
#getManager().sigModulesChanged.disconnect(self.fillModuleList)
AnalysisModule.quit(self)
for p in self.tasks.values():
p.close()
def cameraModule(self):
return self.ui.cameraModCombo.getSelectedObj()
#return str(self.ui.cameraModCombo.currentText())
def cameraDevice(self):
camMod = self.cameraModule()
#mod = self.man.getModule(camMod)
if 'camDev' in camMod.config:
return camMod.config['camDev']
else:
return None
def clampDevice(self):
return str(self.ui.clampDevCombo.currentText())
def scannerDevice(self):
return str(self.ui.scannerDevCombo.currentText())