def __init__(self, codon_table = None, *args, **kwargs): self.mCodonTable = codon_table self.mDefaultRates = {} Transitions.__init__( self, rate_generator = RatesDictionary( self.mDefaultRates ), *args, **kwargs )
def __init__(self, codon_table=None, *args, **kwargs): self.mCodonTable = codon_table self.mDefaultRates = {} Transitions.__init__(self, rate_generator=RatesDictionary( self.mDefaultRates), *args, **kwargs)
def __init__(self, *args, **kwargs): Transitions.__init__( self, *args, **kwargs )
def __init__(self, *args, **kwargs): Transitions.__init__(self, *args, **kwargs)
def __init__(self, fix_frequencies = False, *args,**kwargs): Transitions.__init__(self,*args,**kwargs) self.mFixFrequencies = fix_frequencies
def __init__(self, fix_frequencies=False, *args, **kwargs): Transitions.__init__(self, *args, **kwargs) self.mFixFrequencies = fix_frequencies