def breadth(cmatrix, source):
""" Breadth-first search tree
Performs a breadth-first search starting at the source node. Because C++
indexing is zero-based, a value of 0 at branch(i) could mean either that
node 0 precedes node i or that node i is unreachable. Check distance(i)
for GSL_POSINF to differentiate between these two cases.
Parameters
----------
cmatrix : connection matrix
source : source vertex
Returns
-------
distance : distance between 'source' and i'th vertex
(0 for source vertex)
branch : vertex that precedes i in the breadth-first search tree
(-1 for source vertex)
Note: breadth-first search tree does not contain all paths
(or all shortest paths), but allows the determination of at least one
path with minimum distance.
the entire graph is explored, starting from source vertex 'source'
Olaf Sporns, Indiana University, 2002/2007/2008
"""
m = bct.to_gslm(cmatrix.tolist())
str = bct.breadth(m, source)
strnp = bct.from_gsl(str)
bct.gsl_free(m)
bct.gsl_free(str)
return np.asarray(strnp)
def breadth(cmatrix, source):
""" Breadth-first search tree
Performs a breadth-first search starting at the source node. Because C++
indexing is zero-based, a value of 0 at branch(i) could mean either that
node 0 precedes node i or that node i is unreachable. Check distance(i)
for GSL_POSINF to differentiate between these two cases.
Parameters
----------
cmatrix : connection matrix
source : source vertex
Returns
-------
distance : distance between 'source' and i'th vertex
(0 for source vertex)
branch : vertex that precedes i in the breadth-first search tree
(-1 for source vertex)
Note: breadth-first search tree does not contain all paths
(or all shortest paths), but allows the determination of at least one
path with minimum distance.
the entire graph is explored, starting from source vertex 'source'
Olaf Sporns, Indiana University, 2002/2007/2008
"""
m = bct.to_gslm(cmatrix.tolist())
str = bct.breadth(m, source)
strnp = bct.from_gsl(str)
bct.gsl_free(m)
bct.gsl_free(str)
return np.asarray(strnp)
def breadth(*args): return _bct.breadth(*args)
def breadth(*args):
return _bct.breadth(*args)
def breadth(*args): """breadth(gsl_matrix CIJ, int source) -> gsl_vector""" return _bct.breadth(*args)
def breadth(*args):
"""breadth(gsl_matrix CIJ, int source) -> gsl_vector"""
return _bct.breadth(*args)