def jobs(index = None):
""" See the status of the jobs or return the job on index """
jbs = Jobs()
if index is None:
jbs.getStatuses()
print jbs
else:
return jbs.getJob(index)
def sshsubmit(self):
from abstract import Jobs
#TODO:Check job before submitting and messages after for err. or warn.
ex = self.__executor
fl = self.__filer
self.checkjob() # check job's attributes
# create the command string
command = self.prepare_command("~/.tempjob/.autogenerated.jdl")
jdlpath = os.path.gethome() + os.path.sep + ".autogenerated.jdl"
self.create_zipped_job()
ex.exec("mkdir -p ~/.tempjob")
ex.close()
fl.upload(os.path.gethome() + os.path.sep + ".job.zip",ex.getEnv("HOME")+"/.tempjob")
ex.exec("unzip -u ~/.tempjob/.job.zip -d ~/.tempjob")
inp = ex.input()
ex.close()
jdl = self.create_description_string() # create the jdl string
f = open(jdlpath, 'w')
f.write(jdl)
f.close()
fl.upload(jdlpath, ex.getEnv("HOME")+"/.tempjob")
print "Submitting job ..."
ex.exec(command)
infostring = ex.input()
#print infostring
ex.close()
os.remove(jdlpath)
ex.exec("rm -R .tempjob")
ex.input()
ex.close()
pattern = re.compile('(https://.*$)', re.MULTILINE)
match = pattern.search(infostring)
self.__id = match.group()
if self.name == '':
self.name = "Job-"+os.path.basename(self.__id)
jbs = Jobs()
jbs.addJob(self)
zf = zipfile.ZipFile(os.path.gethome() + os.path.sep + ".job.zip")
zf.close()
os.remove(os.path.gethome() + os.path.sep + ".job.zip")
def uisubmit(self):
from abstract import Jobs
self.checkjob() # check job's attributes
command = self.prepare_command(".autogenerated_jdl") # create the command string
ex = self.__executor
jdl = self.create_description_string() # create the jdl string
f = open(".autogenerated.jdl", 'w')
f.write(jdl)
f.close()
print "Submitting job ..."
ex.exec(command)
infostring = ex.input()
ex.close()
os.remove('.autogenerated.jdl')
pattern = re.compile('(https://.*$)', re.MULTILINE)
match = pattern.search(infostring)
self.__id = match.group()
if self.name == '':
self.name = "Job-"+os.path.basename(self.__id)
jbs = Jobs()
jbs.addJob(self)