def test_round_trip(bwamem_help):
command = parse_help(["bwa", "mem"], bwamem_help)
# Dump
buffer = StringIO()
yaml.dump(command, buffer)
# Load
buffer.seek(0)
output = yaml.load(buffer)
# Assert the round trip worked
assert command == output
def save_to_file(self, cmd: Command, path: Path) -> None:
map = self.command_to_tool(cmd).save()
with path.open("w") as fp:
yaml.dump(map, fp)
def save_to_string(self, cmd: Command) -> str:
buffer = StringIO()
yaml.dump(cmd, buffer)
return buffer.getvalue()
def save_to_string(self, cmd: Command) -> str:
io = StringIO()
yaml.dump(self.command_to_tool(cmd).save(), io)
return io.getvalue()
def save_to_file(self, cmd: Command, path: Path) -> None:
with path.open("w") as fp:
yaml.dump(cmd, fp)