def get(self):
open_humans = self.get_secure_cookie('open-humans')
# If the user isn't authenticated render the page to allow them to
# authenticate
if not open_humans:
ag_login_id = ag_data.get_user_for_kit(self.current_user)
human_participants = ag_data.getHumanParticipants(ag_login_id)
survey_ids = {}
for participant_name in human_participants:
survey_id = ag_data.get_survey_id(ag_login_id,
participant_name)
if survey_id:
survey_ids[participant_name] = survey_id
self.render('open-humans.html',
skid=self.current_user,
survey_ids=survey_ids,
access_token=None,
origin=self.coerce_origin(),
open_humans_home_url=self._HOME_URL,
open_humans_research_url=self._RESEARCH_URL,
open_humans_api_url=self._API_URL)
return
open_humans = escape.json_decode(open_humans)
self.open_humans_request(
'/american-gut/user-data/',
self._on_user_data_cb,
access_token=open_humans['access_token'])
def get(self):
open_humans = self.get_secure_cookie('open-humans')
# If the user isn't authenticated render the page to allow them to
# authenticate
if not open_humans:
ag_login_id = ag_data.get_user_for_kit(self.current_user)
human_participants = ag_data.getHumanParticipants(ag_login_id)
survey_ids = {}
for participant_name in human_participants:
# Get survey ID 1, the main human survey
survey_id = ag_data.get_survey_ids(ag_login_id,
participant_name)[1]
if survey_id:
survey_ids[participant_name] = survey_id
self.render('open-humans.html',
skid=self.current_user,
survey_ids=survey_ids,
access_token=None,
origin=self.coerce_origin(),
open_humans_home_url=self._HOME_URL,
open_humans_research_url=self._RESEARCH_URL,
open_humans_api_url=self._API_URL)
return
open_humans = escape.json_decode(open_humans)
self.open_humans_request('/american-gut/user-data/',
self._on_user_data_cb,
access_token=open_humans['access_token'])
def on_message(self, msg):
tl = text_locale['handlers']
skid = self.current_user
participant_name = msg
ag_login_id = ag_data.get_user_for_kit(skid)
human_participants = ag_data.getHumanParticipants(ag_login_id)
animal_participants = ag_data.getAnimalParticipants(ag_login_id)
if participant_name in (human_participants + animal_participants):
# if the participant already exists in the system, fail nicely
output_message = (tl['PARTICIPANT_EXISTS'] % participant_name)
else:
# otherwise, success!
output_message = 'success'
self.write_message(output_message)
def on_message(self, msg):
tl = text_locale['handlers']
skid = self.current_user
participant_name = msg
ag_login_id = ag_data.get_user_for_kit(skid)
human_participants = ag_data.getHumanParticipants(ag_login_id)
animal_participants = ag_data.getAnimalParticipants(ag_login_id)
if participant_name in (human_participants + animal_participants):
# if the participant already exists in the system, fail nicely
output_message = (tl['PARTICIPANT_EXISTS'] % participant_name)
else:
# otherwise, success!
output_message = 'success'
self.write_message(output_message)
def _on_user_data_cb(self, user_data):
open_humans = escape.json_decode(self.get_secure_cookie('open-humans'))
try:
link_survey_id = escape.json_decode(
base64.b64decode(self.get_cookie('link-survey-id')))
except (AttributeError, ValueError, TypeError):
link_survey_id = None
if link_survey_id:
self.open_humans_request(
'/american-gut/user-data/',
self._on_post_user_data_cb,
method='PATCH',
body={'data': {
'surveyIds': link_survey_id
}},
access_token=open_humans['access_token'])
return
survey_ids = {}
ag_login_id = ag_data.get_user_for_kit(self.current_user)
human_participants = ag_data.getHumanParticipants(ag_login_id)
for participant_name in human_participants:
# Get survey ID 1, the main human survey
survey_id = ag_data.get_survey_ids(ag_login_id,
participant_name)[1]
if survey_id:
survey_ids[participant_name] = survey_id
self.render('open-humans.html',
skid=self.current_user,
survey_ids=survey_ids,
access_token=open_humans['access_token'],
origin=self.coerce_origin(),
open_humans_home_url=self._HOME_URL,
open_humans_research_url=self._RESEARCH_URL,
open_humans_api_url=self._API_URL)
def _on_user_data_cb(self, user_data):
open_humans = escape.json_decode(self.get_secure_cookie('open-humans'))
try:
link_survey_id = escape.json_decode(
base64.b64decode(self.get_cookie('link-survey-id')))
except (AttributeError, ValueError, TypeError):
link_survey_id = None
if link_survey_id:
self.open_humans_request(
'/american-gut/user-data/',
self._on_post_user_data_cb,
method='PATCH',
body={'data': {'surveyIds': link_survey_id}},
access_token=open_humans['access_token'])
return
survey_ids = {}
ag_login_id = ag_data.get_user_for_kit(self.current_user)
human_participants = ag_data.getHumanParticipants(ag_login_id)
for participant_name in human_participants:
# Get survey ID 1, the main human survey
survey_id = ag_data.get_survey_ids(ag_login_id,
participant_name)[1]
if survey_id:
survey_ids[participant_name] = survey_id
self.render('open-humans.html',
skid=self.current_user,
survey_ids=survey_ids,
access_token=open_humans['access_token'],
origin=self.coerce_origin(),
open_humans_home_url=self._HOME_URL,
open_humans_research_url=self._RESEARCH_URL,
open_humans_api_url=self._API_URL)